RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 DPEP1P16444 411 aa17.52■□□□□ 0.4
RPAIN-205ENST00000536255 EIF2S2P20042 333 aaKnown RBP17.52■□□□□ 0.4
RPAIN-205ENST00000536255 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
RPAIN-205ENST00000536255 AFDNP55196 1824 aaKnown RBP17.51■□□□□ 0.39
RPAIN-205ENST00000536255 SETDB2Q96T68 719 aa17.51■□□□□ 0.39
RPAIN-205ENST00000536255 CHMP4AQ9BY43 222 aa17.51■□□□□ 0.39
RPAIN-205ENST00000536255 MYH16Q9H6N6 1097 aa17.51■□□□□ 0.39
RPAIN-205ENST00000536255 WWC3Q9ULE0 1092 aa17.51■□□□□ 0.39
RPAIN-205ENST00000536255 N4BP2Q86UW6 1770 aaPredicted RBP17.51■□□□□ 0.39
RPAIN-205ENST00000536255 YY1P25490 414 aa17.5■□□□□ 0.39
RPAIN-205ENST00000536255 PDIA6Q15084 440 aa17.5■□□□□ 0.39
RPAIN-205ENST00000536255 KIF6Q6ZMV9 814 aa17.5■□□□□ 0.39
RPAIN-205ENST00000536255 MAP3K15Q6ZN16 1313 aa17.49■□□□□ 0.39
RPAIN-205ENST00000536255 ZNF521Q96K83 1311 aa17.49■□□□□ 0.39
RPAIN-205ENST00000536255 ERVV-1B6SEH8 477 aa17.49■□□□□ 0.39
RPAIN-205ENST00000536255 GOLGA2Q08379 1002 aa17.49■□□□□ 0.39
RPAIN-205ENST00000536255 TTLL7Q6ZT98 887 aa17.49■□□□□ 0.39
RPAIN-205ENST00000536255 LRP10Q7Z4F1 713 aa17.49■□□□□ 0.39
RPAIN-205ENST00000536255 NECTIN2Q92692 538 aa17.49■□□□□ 0.39
RPAIN-205ENST00000536255 KCNA3P22001 575 aa17.48■□□□□ 0.39
RPAIN-205ENST00000536255 HLFQ16534 295 aa17.48■□□□□ 0.39
RPAIN-205ENST00000536255 PROSER3Q2NL68 480 aa17.48■□□□□ 0.39
RPAIN-205ENST00000536255 HDGFL1Q5TGJ6 251 aa17.48■□□□□ 0.39
RPAIN-205ENST00000536255 DUSP27Q5VZP5 1158 aa17.48■□□□□ 0.39
RPAIN-205ENST00000536255 PRR5LQ6MZQ0 368 aa17.48■□□□□ 0.39
RPAIN-205ENST00000536255 CNBD1Q8NA66 436 aa17.48■□□□□ 0.39
RPAIN-205ENST00000536255 TSR2Q969E8 191 aaKnown RBP17.48■□□□□ 0.39
RPAIN-205ENST00000536255 CHRNA5P30532 468 aa17.47■□□□□ 0.39
RPAIN-205ENST00000536255 ZBTB3Q9H5J0 574 aa17.47■□□□□ 0.39
RPAIN-205ENST00000536255 DDX21Q9NR30 783 aaKnown RBP eCLIP17.47■□□□□ 0.39
RPAIN-205ENST00000536255 PIM2Q9P1W9 311 aa17.47■□□□□ 0.39
RPAIN-205ENST00000536255 NIP7Q9Y221 180 aaKnown RBP eCLIP17.47■□□□□ 0.39
RPAIN-205ENST00000536255 FANCIQ9NVI1 1328 aa17.47■□□□□ 0.39
RPAIN-205ENST00000536255 E9PSI1 815 aa17.46■□□□□ 0.39
RPAIN-205ENST00000536255 NPHP1O15259 732 aa17.46■□□□□ 0.39
RPAIN-205ENST00000536255 ANXA1P04083 346 aa17.46■□□□□ 0.39
RPAIN-205ENST00000536255 HNRNPUQ00839 825 aaKnown RBP eCLIP17.46■□□□□ 0.39
RPAIN-205ENST00000536255 NBPF5PQ86XG9 351 aaPredicted RBP17.46■□□□□ 0.39
RPAIN-205ENST00000536255 CHPF2Q9P2E5 772 aa17.46■□□□□ 0.39
RPAIN-205ENST00000536255 BCS1LQ9Y276 419 aa17.46■□□□□ 0.39
RPAIN-205ENST00000536255 ATP10DQ9P241 1426 aa17.46■□□□□ 0.39
RPAIN-205ENST00000536255 ST5P78524 1137 aa17.45■□□□□ 0.38
RPAIN-205ENST00000536255 BRIP1Q9BX63 1249 aa17.45■□□□□ 0.38
RPAIN-205ENST00000536255 BRCA1P38398 1863 aaKnown RBP17.45■□□□□ 0.38
RPAIN-205ENST00000536255 DALRD3Q5D0E6 543 aaKnown RBP17.44■□□□□ 0.38
RPAIN-205ENST00000536255 CCDC24Q8N4L8 307 aa17.44■□□□□ 0.38
RPAIN-205ENST00000536255 C8orf58Q8NAV2 365 aa17.44■□□□□ 0.38
RPAIN-205ENST00000536255 DBF4Q9UBU7 674 aaPredicted RBP17.44■□□□□ 0.38
RPAIN-205ENST00000536255 CHD4Q14839 1912 aa17.43■□□□□ 0.38
RPAIN-205ENST00000536255 ELL2O00472 640 aaPredicted RBP17.43■□□□□ 0.38
RPAIN-205ENST00000536255 PDE6BP35913 854 aa17.43■□□□□ 0.38
RPAIN-205ENST00000536255 TWISTNBQ3B726 338 aaPredicted RBP17.43■□□□□ 0.38
RPAIN-205ENST00000536255 GIGYF2Q6Y7W6 1299 aaKnown RBP17.43■□□□□ 0.38
RPAIN-205ENST00000536255 COPS6Q7L5N1 327 aa17.43■□□□□ 0.38
RPAIN-205ENST00000536255 C2CD5Q86YS7 1000 aa17.43■□□□□ 0.38
RPAIN-205ENST00000536255 XAGE3Q8WTP9 111 aa17.43■□□□□ 0.38
RPAIN-205ENST00000536255 SPINK5Q9NQ38 1064 aaPredicted RBP17.43■□□□□ 0.38
RPAIN-205ENST00000536255 ANKRD31Q8N7Z5 1873 aa17.42■□□□□ 0.38
RPAIN-205ENST00000536255 H0YIN7 160 aa17.42■□□□□ 0.38
RPAIN-205ENST00000536255 AIMP1Q12904 312 aaKnown RBP17.42■□□□□ 0.38
RPAIN-205ENST00000536255 CCDC30Q5VVM6 783 aa17.42■□□□□ 0.38
RPAIN-205ENST00000536255 TPTE2Q6XPS3 522 aa17.42■□□□□ 0.38
RPAIN-205ENST00000536255 PDZRN3Q9UPQ7 1066 aa17.42■□□□□ 0.38
RPAIN-205ENST00000536255 DLEC1Q9Y238 1755 aa17.42■□□□□ 0.38
RPAIN-205ENST00000536255 FAM177BA6PVY3 158 aa17.41■□□□□ 0.38
RPAIN-205ENST00000536255 GPTP24298 496 aa17.41■□□□□ 0.38
RPAIN-205ENST00000536255 SLFN5Q08AF3 891 aa17.41■□□□□ 0.38
RPAIN-205ENST00000536255 TSPYL6Q8N831 410 aa17.41■□□□□ 0.38
RPAIN-205ENST00000536255 HYPKQ9NX55 129 aa17.41■□□□□ 0.38
RPAIN-205ENST00000536255 NUP98P52948 1817 aa17.41■□□□□ 0.38
RPAIN-205ENST00000536255 UBN2Q6ZU65 1347 aa17.41■□□□□ 0.38
RPAIN-205ENST00000536255 EXOSC9Q06265 439 aaKnown RBP17.4■□□□□ 0.38
RPAIN-205ENST00000536255 ZNF34Q8IZ26 560 aa17.4■□□□□ 0.38
RPAIN-205ENST00000536255 NYXQ9GZU5 481 aa17.4■□□□□ 0.38
RPAIN-205ENST00000536255 IBTKQ9P2D0 1353 aaPredicted RBP17.4■□□□□ 0.38
RPAIN-205ENST00000536255 COL11A2P13942 1736 aaPredicted RBP17.39■□□□□ 0.37
RPAIN-205ENST00000536255 TTLL6Q8N841 843 aa17.39■□□□□ 0.37
RPAIN-205ENST00000536255 STK31Q9BXU1 1019 aa17.39■□□□□ 0.37
RPAIN-205ENST00000536255 ARFGEF1Q9Y6D6 1849 aa17.39■□□□□ 0.37
RPAIN-205ENST00000536255 GTF2E1P29083 439 aaPredicted RBP17.38■□□□□ 0.37
RPAIN-205ENST00000536255 PARP10Q53GL7 1025 aa17.38■□□□□ 0.37
RPAIN-205ENST00000536255 ARHGAP27Q6ZUM4 889 aa17.38■□□□□ 0.37
RPAIN-205ENST00000536255 ZBED9Q6R2W3 1325 aa17.38■□□□□ 0.37
RPAIN-205ENST00000536255 SRGNP10124 158 aa17.37■□□□□ 0.37
RPAIN-205ENST00000536255 HSP90AB3PQ58FF7 597 aa17.37■□□□□ 0.37
RPAIN-205ENST00000536255 SUSD4Q5VX71 490 aa17.37■□□□□ 0.37
RPAIN-205ENST00000536255 PLBD2Q8NHP8 589 aa17.37■□□□□ 0.37
RPAIN-205ENST00000536255 ZNF622Q969S3 477 aaKnown RBP eCLIP17.37■□□□□ 0.37
RPAIN-205ENST00000536255 CDCA7LQ96GN5 454 aa17.37■□□□□ 0.37
RPAIN-205ENST00000536255 ABCC12Q96J65 1359 aa17.37■□□□□ 0.37
RPAIN-205ENST00000536255 KLRG2A4D1S0 409 aaPredicted RBP17.36■□□□□ 0.37
RPAIN-205ENST00000536255 VAMP4O75379 141 aa17.36■□□□□ 0.37
RPAIN-205ENST00000536255 NTSR2O95665 410 aa17.36■□□□□ 0.37
RPAIN-205ENST00000536255 STYK1Q6J9G0 422 aa17.36■□□□□ 0.37
RPAIN-205ENST00000536255 ANKRD13DQ6ZTN6 518 aa17.36■□□□□ 0.37
RPAIN-205ENST00000536255 PPP1R42Q7Z4L9 355 aa17.36■□□□□ 0.37
RPAIN-205ENST00000536255 NUTM1Q86Y26 1132 aa17.36■□□□□ 0.37
RPAIN-205ENST00000536255 ZNF784Q8NCA9 323 aaPredicted RBP17.36■□□□□ 0.37
RPAIN-205ENST00000536255 TCIRG1Q13488 830 aa17.35■□□□□ 0.37
RPAIN-205ENST00000536255 ERFEQ4G0M1 354 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms