RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 HDGFL1Q5TGJ6 251 aa16.52■□□□□ 0.24
VPS37C-203ENST00000536000 DDX21Q9NR30 783 aaKnown RBP eCLIP16.52■□□□□ 0.24
VPS37C-203ENST00000536000 NIP7Q9Y221 180 aaKnown RBP eCLIP16.52■□□□□ 0.24
VPS37C-203ENST00000536000 PROSER3Q2NL68 480 aa16.51■□□□□ 0.23
VPS37C-203ENST00000536000 WDR63Q8IWG1 891 aa16.51■□□□□ 0.23
VPS37C-203ENST00000536000 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
VPS37C-203ENST00000536000 PIM2Q9P1W9 311 aa16.51■□□□□ 0.23
VPS37C-203ENST00000536000 BCS1LQ9Y276 419 aa16.51■□□□□ 0.23
VPS37C-203ENST00000536000 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
VPS37C-203ENST00000536000 CARMIL3Q8ND23 1372 aa16.51■□□□□ 0.23
VPS37C-203ENST00000536000 CCER2I3L3R5 266 aa16.5■□□□□ 0.23
VPS37C-203ENST00000536000 KCNA3P22001 575 aa16.5■□□□□ 0.23
VPS37C-203ENST00000536000 CHRNA5P30532 468 aa16.5■□□□□ 0.23
VPS37C-203ENST00000536000 AIMP1Q12904 312 aaKnown RBP16.5■□□□□ 0.23
VPS37C-203ENST00000536000 PRR5LQ6MZQ0 368 aa16.5■□□□□ 0.23
VPS37C-203ENST00000536000 TPTE2Q6XPS3 522 aa16.5■□□□□ 0.23
VPS37C-203ENST00000536000 COPS6Q7L5N1 327 aa16.5■□□□□ 0.23
VPS37C-203ENST00000536000 NBPF5PQ86XG9 351 aaPredicted RBP16.5■□□□□ 0.23
VPS37C-203ENST00000536000 CHMP4AQ9BY43 222 aa16.5■□□□□ 0.23
VPS37C-203ENST00000536000 DBF4Q9UBU7 674 aaPredicted RBP16.5■□□□□ 0.23
VPS37C-203ENST00000536000 IL16Q14005 1332 aa16.49■□□□□ 0.23
VPS37C-203ENST00000536000 PXDNLA1KZ92 1463 aa16.49■□□□□ 0.23
VPS37C-203ENST00000536000 FAM177BA6PVY3 158 aa16.49■□□□□ 0.23
VPS37C-203ENST00000536000 H0YIN7 160 aa16.49■□□□□ 0.23
VPS37C-203ENST00000536000 ST5P78524 1137 aa16.49■□□□□ 0.23
VPS37C-203ENST00000536000 DIEXFQ68CQ4 756 aaKnown RBP16.49■□□□□ 0.23
VPS37C-203ENST00000536000 LRP10Q7Z4F1 713 aa16.49■□□□□ 0.23
VPS37C-203ENST00000536000 CCDC24Q8N4L8 307 aa16.49■□□□□ 0.23
VPS37C-203ENST00000536000 CNBD1Q8NA66 436 aa16.49■□□□□ 0.23
VPS37C-203ENST00000536000 C8orf58Q8NAV2 365 aa16.49■□□□□ 0.23
VPS37C-203ENST00000536000 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
VPS37C-203ENST00000536000 BRIP1Q9BX63 1249 aa16.49■□□□□ 0.23
VPS37C-203ENST00000536000 CHPF2Q9P2E5 772 aa16.49■□□□□ 0.23
VPS37C-203ENST00000536000 AFDNP55196 1824 aaKnown RBP16.48■□□□□ 0.23
VPS37C-203ENST00000536000 KIF13BQ9NQT8 1826 aa16.48■□□□□ 0.23
VPS37C-203ENST00000536000 GTF2E1P29083 439 aaPredicted RBP16.48■□□□□ 0.23
VPS37C-203ENST00000536000 PDE6BP35913 854 aa16.48■□□□□ 0.23
VPS37C-203ENST00000536000 GIGYF2Q6Y7W6 1299 aaKnown RBP16.48■□□□□ 0.23
VPS37C-203ENST00000536000 C2CD5Q86YS7 1000 aa16.48■□□□□ 0.23
VPS37C-203ENST00000536000 TSR2Q969E8 191 aaKnown RBP16.48■□□□□ 0.23
VPS37C-203ENST00000536000 PDZRN3Q9UPQ7 1066 aa16.48■□□□□ 0.23
VPS37C-203ENST00000536000 DALRD3Q5D0E6 543 aaKnown RBP16.47■□□□□ 0.23
VPS37C-203ENST00000536000 HYPKQ9NX55 129 aa16.47■□□□□ 0.23
VPS37C-203ENST00000536000 N4BP2Q86UW6 1770 aaPredicted RBP16.46■□□□□ 0.23
VPS37C-203ENST00000536000 GPTP24298 496 aa16.46■□□□□ 0.23
VPS37C-203ENST00000536000 CCDC30Q5VVM6 783 aa16.46■□□□□ 0.23
VPS37C-203ENST00000536000 SCN7AQ01118 1682 aa16.46■□□□□ 0.23
VPS37C-203ENST00000536000 HSP90AB3PQ58FF7 597 aa16.45■□□□□ 0.22
VPS37C-203ENST00000536000 ANKRD13DQ6ZTN6 518 aa16.45■□□□□ 0.22
VPS37C-203ENST00000536000 ARHGAP27Q6ZUM4 889 aa16.45■□□□□ 0.22
VPS37C-203ENST00000536000 ZNF34Q8IZ26 560 aa16.45■□□□□ 0.22
VPS37C-203ENST00000536000 TSPYL6Q8N831 410 aa16.45■□□□□ 0.22
VPS37C-203ENST00000536000 ZNF622Q969S3 477 aaKnown RBP eCLIP16.45■□□□□ 0.22
VPS37C-203ENST00000536000 NYXQ9GZU5 481 aa16.45■□□□□ 0.22
VPS37C-203ENST00000536000 BCORQ6W2J9 1755 aa16.44■□□□□ 0.22
VPS37C-203ENST00000536000 GOLGA2Q08379 1002 aa16.44■□□□□ 0.22
VPS37C-203ENST00000536000 TTLL6Q8N841 843 aa16.44■□□□□ 0.22
VPS37C-203ENST00000536000 CHD4Q14839 1912 aa16.44■□□□□ 0.22
VPS37C-203ENST00000536000 NRXN2Q9P2S2 1712 aa16.44■□□□□ 0.22
VPS37C-203ENST00000536000 NUP98P52948 1817 aa16.43■□□□□ 0.22
VPS37C-203ENST00000536000 TCIRG1Q13488 830 aa16.43■□□□□ 0.22
VPS37C-203ENST00000536000 TWISTNBQ3B726 338 aaPredicted RBP16.43■□□□□ 0.22
VPS37C-203ENST00000536000 PARP10Q53GL7 1025 aa16.43■□□□□ 0.22
VPS37C-203ENST00000536000 SUSD4Q5VX71 490 aa16.43■□□□□ 0.22
VPS37C-203ENST00000536000 PPP1R42Q7Z4L9 355 aa16.43■□□□□ 0.22
VPS37C-203ENST00000536000 PLBD2Q8NHP8 589 aa16.43■□□□□ 0.22
VPS37C-203ENST00000536000 MIER1Q8N108 512 aa16.42■□□□□ 0.22
VPS37C-203ENST00000536000 MYH16Q9H6N6 1097 aa16.42■□□□□ 0.22
VPS37C-203ENST00000536000 RIC3Q7Z5B4 369 aa16.41■□□□□ 0.22
VPS37C-203ENST00000536000 NUTM1Q86Y26 1132 aa16.41■□□□□ 0.22
VPS37C-203ENST00000536000 MASTLQ96GX5 879 aa16.41■□□□□ 0.22
VPS37C-203ENST00000536000 STK31Q9BXU1 1019 aa16.41■□□□□ 0.22
VPS37C-203ENST00000536000 PHAXQ9H814 394 aaKnown RBP16.41■□□□□ 0.22
VPS37C-203ENST00000536000 ATP10DQ9P241 1426 aa16.41■□□□□ 0.22
VPS37C-203ENST00000536000 KIAA1551Q9HCM1 1747 aa16.41■□□□□ 0.22
VPS37C-203ENST00000536000 FANCIQ9NVI1 1328 aa16.41■□□□□ 0.22
VPS37C-203ENST00000536000 SRGNP10124 158 aa16.4■□□□□ 0.22
VPS37C-203ENST00000536000 EXOSC9Q06265 439 aaKnown RBP16.4■□□□□ 0.22
VPS37C-203ENST00000536000 ERFEQ4G0M1 354 aa16.4■□□□□ 0.22
VPS37C-203ENST00000536000 STYK1Q6J9G0 422 aa16.4■□□□□ 0.22
VPS37C-203ENST00000536000 CNKSR1Q969H4 720 aa16.4■□□□□ 0.22
VPS37C-203ENST00000536000 UTP14AQ9BVJ6 771 aaKnown RBP16.4■□□□□ 0.22
VPS37C-203ENST00000536000 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
VPS37C-203ENST00000536000 UBN2Q6ZU65 1347 aa16.4■□□□□ 0.22
VPS37C-203ENST00000536000 TCERG1O14776 1098 aaKnown RBP16.39■□□□□ 0.21
VPS37C-203ENST00000536000 KLRG2A4D1S0 409 aaPredicted RBP16.38■□□□□ 0.21
VPS37C-203ENST00000536000 VAMP4O75379 141 aa16.38■□□□□ 0.21
VPS37C-203ENST00000536000 DDX58O95786 925 aaKnown RBP16.38■□□□□ 0.21
VPS37C-203ENST00000536000 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
VPS37C-203ENST00000536000 NPR1P16066 1061 aa16.38■□□□□ 0.21
VPS37C-203ENST00000536000 NLRP10Q86W26 655 aa16.38■□□□□ 0.21
VPS37C-203ENST00000536000 NTSR2O95665 410 aa16.37■□□□□ 0.21
VPS37C-203ENST00000536000 ZNF219Q9P2Y4 722 aaPredicted RBP16.37■□□□□ 0.21
VPS37C-203ENST00000536000 TRMT112Q9UI30 125 aaKnown RBP16.37■□□□□ 0.21
VPS37C-203ENST00000536000 BRCA1P38398 1863 aaKnown RBP16.36■□□□□ 0.21
VPS37C-203ENST00000536000 ANKRD31Q8N7Z5 1873 aa16.36■□□□□ 0.21
VPS37C-203ENST00000536000 ATP5J2-PTCD1G3V325 749 aa16.36■□□□□ 0.21
VPS37C-203ENST00000536000 ALDH1B1P30837 517 aa16.36■□□□□ 0.21
VPS37C-203ENST00000536000 SLC10A5Q5PT55 438 aa16.36■□□□□ 0.21
VPS37C-203ENST00000536000 NLRP3Q96P20 1036 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 362.8 ms