RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 RFC4P35249 363 aa16.54■□□□□ 0.24
DDB1-207ENST00000535967 DNAJC5GQ8N7S2 189 aa16.54■□□□□ 0.24
DDB1-207ENST00000535967 FMNL2Q96PY5 1086 aa16.54■□□□□ 0.24
DDB1-207ENST00000535967 CCDC87Q9NVE4 849 aa16.54■□□□□ 0.24
DDB1-207ENST00000535967 DDR1Q08345 913 aa16.53■□□□□ 0.24
DDB1-207ENST00000535967 WDR90Q96KV7 1748 aa16.53■□□□□ 0.24
DDB1-207ENST00000535967 TOMM70O94826 608 aa16.53■□□□□ 0.24
DDB1-207ENST00000535967 ZNF496Q96IT1 587 aaPredicted RBP16.53■□□□□ 0.24
DDB1-207ENST00000535967 PARP3Q9Y6F1 533 aa16.53■□□□□ 0.24
DDB1-207ENST00000535967 SBF1O95248 1867 aa16.52■□□□□ 0.24
DDB1-207ENST00000535967 CRKLP46109 303 aaKnown RBP16.52■□□□□ 0.23
DDB1-207ENST00000535967 APLP1P51693 650 aa16.52■□□□□ 0.23
DDB1-207ENST00000535967 C9orf131Q5VYM1 1079 aa16.52■□□□□ 0.23
DDB1-207ENST00000535967 WWC1Q8IX03 1113 aa16.52■□□□□ 0.23
DDB1-207ENST00000535967 TSPYL4Q9UJ04 414 aa16.52■□□□□ 0.23
DDB1-207ENST00000535967 HTRA3P83110 453 aa16.51■□□□□ 0.23
DDB1-207ENST00000535967 CFAP44Q96MT7 982 aa16.51■□□□□ 0.23
DDB1-207ENST00000535967 TEX13AQ9BXU3 409 aaPredicted RBP16.51■□□□□ 0.23
DDB1-207ENST00000535967 IFT57Q9NWB7 429 aa16.51■□□□□ 0.23
DDB1-207ENST00000535967 IL16Q14005 1332 aa16.5■□□□□ 0.23
DDB1-207ENST00000535967 USP42Q9H9J4 1324 aaKnown RBP16.5■□□□□ 0.23
DDB1-207ENST00000535967 SCN7AQ01118 1682 aa16.5■□□□□ 0.23
DDB1-207ENST00000535967 PCNTO95613 3336 aa16.5■□□□□ 0.23
DDB1-207ENST00000535967 CHL1O00533 1208 aa16.5■□□□□ 0.23
DDB1-207ENST00000535967 GNAI1P63096 354 aa16.5■□□□□ 0.23
DDB1-207ENST00000535967 FARP1Q9Y4F1 1045 aaPredicted RBP16.5■□□□□ 0.23
DDB1-207ENST00000535967 BCORQ6W2J9 1755 aa16.5■□□□□ 0.23
DDB1-207ENST00000535967 KCNQ3O43525 872 aa16.49■□□□□ 0.23
DDB1-207ENST00000535967 CHRNA5P30532 468 aa16.49■□□□□ 0.23
DDB1-207ENST00000535967 DNAJC10Q8IXB1 793 aa16.49■□□□□ 0.23
DDB1-207ENST00000535967 AFDNP55196 1824 aaKnown RBP16.48■□□□□ 0.23
DDB1-207ENST00000535967 SNRPA1P09661 255 aaKnown RBP16.48■□□□□ 0.23
DDB1-207ENST00000535967 ZNF853P0CG23 659 aa16.48■□□□□ 0.23
DDB1-207ENST00000535967 EIF4A1P60842 406 aaKnown RBP16.48■□□□□ 0.23
DDB1-207ENST00000535967 INTS5Q6P9B9 1019 aaKnown RBP16.48■□□□□ 0.23
DDB1-207ENST00000535967 WDR63Q8IWG1 891 aa16.48■□□□□ 0.23
DDB1-207ENST00000535967 MIS18AQ9NYP9 233 aa16.48■□□□□ 0.23
DDB1-207ENST00000535967 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
DDB1-207ENST00000535967 CACNA1FO60840 1977 aa16.48■□□□□ 0.23
DDB1-207ENST00000535967 CYP19A1P11511 503 aaPredicted RBP16.47■□□□□ 0.23
DDB1-207ENST00000535967 PIM2Q9P1W9 311 aa16.47■□□□□ 0.23
DDB1-207ENST00000535967 POLRMTO00411 1230 aaKnown RBP16.46■□□□□ 0.23
DDB1-207ENST00000535967 STARD3NLO95772 234 aa16.46■□□□□ 0.23
DDB1-207ENST00000535967 LAS1LQ9Y4W2 734 aaKnown RBP16.46■□□□□ 0.23
DDB1-207ENST00000535967 ZNF521Q96K83 1311 aa16.46■□□□□ 0.23
DDB1-207ENST00000535967 DALRD3Q5D0E6 543 aaKnown RBP16.45■□□□□ 0.22
DDB1-207ENST00000535967 RBM46Q8TBY0 533 aaKnown RBP16.45■□□□□ 0.22
DDB1-207ENST00000535967 MBIPQ9NS73 344 aa16.45■□□□□ 0.22
DDB1-207ENST00000535967 RNF181Q9P0P0 153 aa16.45■□□□□ 0.22
DDB1-207ENST00000535967 TM4SF1P30408 202 aa16.45■□□□□ 0.22
DDB1-207ENST00000535967 SPOCK2Q92563 424 aa16.45■□□□□ 0.22
DDB1-207ENST00000535967 TNRC6CQ9HCJ0 1690 aaKnown RBP16.44■□□□□ 0.22
DDB1-207ENST00000535967 HOXB7P09629 217 aa16.44■□□□□ 0.22
DDB1-207ENST00000535967 USPL1Q5W0Q7 1092 aa16.44■□□□□ 0.22
DDB1-207ENST00000535967 SALL2Q9Y467 1007 aaPredicted RBP16.44■□□□□ 0.22
DDB1-207ENST00000535967 PRELPP51888 382 aa16.43■□□□□ 0.22
DDB1-207ENST00000535967 RASSF7Q02833 373 aa16.43■□□□□ 0.22
DDB1-207ENST00000535967 SOS1Q07889 1333 aaPredicted RBP16.43■□□□□ 0.22
DDB1-207ENST00000535967 CCDC88AQ3V6T2 1871 aa16.43■□□□□ 0.22
DDB1-207ENST00000535967 NRXN2Q9P2S2 1712 aa16.43■□□□□ 0.22
DDB1-207ENST00000535967 DLEC1Q9Y238 1755 aa16.43■□□□□ 0.22
DDB1-207ENST00000535967 COL15A1P39059 1388 aa16.42■□□□□ 0.22
DDB1-207ENST00000535967 ERBB4Q15303 1308 aa16.42■□□□□ 0.22
DDB1-207ENST00000535967 RRAGCQ9HB90 399 aa16.42■□□□□ 0.22
DDB1-207ENST00000535967 ZBTB1Q9Y2K1 713 aa16.42■□□□□ 0.22
DDB1-207ENST00000535967 ANKRD36CQ5JPF3 1778 aa16.41■□□□□ 0.22
DDB1-207ENST00000535967 PRAMEF22A3QJZ6 481 aa16.41■□□□□ 0.22
DDB1-207ENST00000535967 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
DDB1-207ENST00000535967 NUP98P52948 1817 aa16.4■□□□□ 0.22
DDB1-207ENST00000535967 FANCIQ9NVI1 1328 aa16.4■□□□□ 0.22
DDB1-207ENST00000535967 NFIXQ14938 502 aa16.4■□□□□ 0.22
DDB1-207ENST00000535967 C16orf71Q8IYS4 520 aaPredicted RBP16.4■□□□□ 0.22
DDB1-207ENST00000535967 KLRG1Q96E93 195 aa16.4■□□□□ 0.22
DDB1-207ENST00000535967 MYH16Q9H6N6 1097 aa16.4■□□□□ 0.22
DDB1-207ENST00000535967 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
DDB1-207ENST00000535967 CARMIL3Q8ND23 1372 aa16.39■□□□□ 0.21
DDB1-207ENST00000535967 KDM2BQ8NHM5 1336 aa16.39■□□□□ 0.21
DDB1-207ENST00000535967 IL6STP40189 918 aaPredicted RBP16.39■□□□□ 0.21
DDB1-207ENST00000535967 TIAM2Q8IVF5 1701 aa16.39■□□□□ 0.21
DDB1-207ENST00000535967 ZPR1O75312 459 aa16.38■□□□□ 0.21
DDB1-207ENST00000535967 GOLGA2Q08379 1002 aa16.38■□□□□ 0.21
DDB1-207ENST00000535967 FSTL1Q12841 308 aa16.38■□□□□ 0.21
DDB1-207ENST00000535967 COL13A1Q5TAT6 717 aaPredicted RBP16.38■□□□□ 0.21
DDB1-207ENST00000535967 JMYQ8N9B5 988 aa16.38■□□□□ 0.21
DDB1-207ENST00000535967 TSR2Q969E8 191 aaKnown RBP16.38■□□□□ 0.21
DDB1-207ENST00000535967 CHMP4AQ9BY43 222 aa16.38■□□□□ 0.21
DDB1-207ENST00000535967 ARFGEF2Q9Y6D5 1785 aa16.38■□□□□ 0.21
DDB1-207ENST00000535967 A0A087WZG4 1122 aa16.37■□□□□ 0.21
DDB1-207ENST00000535967 HAX1O00165 279 aa16.37■□□□□ 0.21
DDB1-207ENST00000535967 CANXP27824 592 aaKnown RBP16.37■□□□□ 0.21
DDB1-207ENST00000535967 NUBP1P53384 320 aa16.37■□□□□ 0.21
DDB1-207ENST00000535967 EIF5P55010 431 aaKnown RBP16.37■□□□□ 0.21
DDB1-207ENST00000535967 ANKRD31Q8N7Z5 1873 aa16.37■□□□□ 0.21
DDB1-207ENST00000535967 E9PSI1 815 aa16.36■□□□□ 0.21
DDB1-207ENST00000535967 A1BGP04217 495 aa16.36■□□□□ 0.21
DDB1-207ENST00000535967 HNRNPUQ00839 825 aaKnown RBP eCLIP16.36■□□□□ 0.21
DDB1-207ENST00000535967 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
DDB1-207ENST00000535967 DUSP27Q5VZP5 1158 aa16.36■□□□□ 0.21
DDB1-207ENST00000535967 NARFQ9UHQ1 456 aa16.36■□□□□ 0.21
DDB1-207ENST00000535967 NPM2Q86SE8 214 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms