RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 HLFQ16534 295 aa21.49■■□□□ 1.03
ATL3-202ENST00000535789 PROSER3Q2NL68 480 aa21.49■■□□□ 1.03
ATL3-202ENST00000535789 BCS1LQ9Y276 419 aa21.49■■□□□ 1.03
ATL3-202ENST00000535789 TIAM2Q8IVF5 1701 aa21.49■■□□□ 1.03
ATL3-202ENST00000535789 SENP3-EIF4A1A0A087X0R7 540 aa21.48■■□□□ 1.03
ATL3-202ENST00000535789 TTLL7Q6ZT98 887 aa21.48■■□□□ 1.03
ATL3-202ENST00000535789 DICER1Q9UPY3 1922 aaKnown RBP21.47■■□□□ 1.03
ATL3-202ENST00000535789 ATP10DQ9P241 1426 aa21.46■■□□□ 1.03
ATL3-202ENST00000535789 ANXA1P04083 346 aa21.46■■□□□ 1.03
ATL3-202ENST00000535789 ZNF853P0CG23 659 aa21.46■■□□□ 1.03
ATL3-202ENST00000535789 MYL6BP14649 208 aa21.46■■□□□ 1.03
ATL3-202ENST00000535789 ERBB4Q15303 1308 aa21.46■■□□□ 1.03
ATL3-202ENST00000535789 ANP32CO43423 234 aa21.45■■□□□ 1.02
ATL3-202ENST00000535789 CLEC4GQ6UXB4 293 aa21.45■■□□□ 1.02
ATL3-202ENST00000535789 NGEFQ8N5V2 710 aa21.45■■□□□ 1.02
ATL3-202ENST00000535789 MRS2Q9HD23 443 aa21.45■■□□□ 1.02
ATL3-202ENST00000535789 MBIPQ9NS73 344 aa21.45■■□□□ 1.02
ATL3-202ENST00000535789 LAS1LQ9Y4W2 734 aaKnown RBP21.45■■□□□ 1.02
ATL3-202ENST00000535789 CFAP44Q96MT7 982 aa21.44■■□□□ 1.02
ATL3-202ENST00000535789 SETDB2Q96T68 719 aa21.44■■□□□ 1.02
ATL3-202ENST00000535789 PIM2Q9P1W9 311 aa21.44■■□□□ 1.02
ATL3-202ENST00000535789 MAP3K15Q6ZN16 1313 aa21.44■■□□□ 1.02
ATL3-202ENST00000535789 RGL2O15211 777 aa21.43■■□□□ 1.02
ATL3-202ENST00000535789 EIF2S2P20042 333 aaKnown RBP21.43■■□□□ 1.02
ATL3-202ENST00000535789 DIEXFQ68CQ4 756 aaKnown RBP21.43■■□□□ 1.02
ATL3-202ENST00000535789 NPM2Q86SE8 214 aaKnown RBP21.43■■□□□ 1.02
ATL3-202ENST00000535789 DDX60Q8IY21 1712 aaKnown RBP21.43■■□□□ 1.02
ATL3-202ENST00000535789 UBN2Q6ZU65 1347 aa21.42■■□□□ 1.02
ATL3-202ENST00000535789 CNBD1Q8NA66 436 aa21.42■■□□□ 1.02
ATL3-202ENST00000535789 NECTIN2Q92692 538 aa21.42■■□□□ 1.02
ATL3-202ENST00000535789 ABCC12Q96J65 1359 aa21.42■■□□□ 1.02
ATL3-202ENST00000535789 DALRD3Q5D0E6 543 aaKnown RBP21.41■■□□□ 1.02
ATL3-202ENST00000535789 C2CD5Q86YS7 1000 aa21.41■■□□□ 1.02
ATL3-202ENST00000535789 ZBTB3Q9H5J0 574 aa21.41■■□□□ 1.02
ATL3-202ENST00000535789 NIP7Q9Y221 180 aaKnown RBP eCLIP21.41■■□□□ 1.02
ATL3-202ENST00000535789 ZNF652Q9Y2D9 606 aa21.41■■□□□ 1.02
ATL3-202ENST00000535789 BRIP1Q9BX63 1249 aa21.4■■□□□ 1.02
ATL3-202ENST00000535789 ERVV-1B6SEH8 477 aa21.39■■□□□ 1.01
ATL3-202ENST00000535789 IFT57Q9NWB7 429 aa21.39■■□□□ 1.01
ATL3-202ENST00000535789 TAF1P21675 1872 aa21.39■■□□□ 1.01
ATL3-202ENST00000535789 NBPF5PQ86XG9 351 aaPredicted RBP21.38■■□□□ 1.01
ATL3-202ENST00000535789 PRELPP51888 382 aa21.37■■□□□ 1.01
ATL3-202ENST00000535789 KIF6Q6ZMV9 814 aa21.37■■□□□ 1.01
ATL3-202ENST00000535789 CHPF2Q9P2E5 772 aa21.37■■□□□ 1.01
ATL3-202ENST00000535789 IBTKQ9P2D0 1353 aaPredicted RBP21.36■■□□□ 1.01
ATL3-202ENST00000535789 CACNA1FO60840 1977 aa21.36■■□□□ 1.01
ATL3-202ENST00000535789 FAM177BA6PVY3 158 aa21.36■■□□□ 1.01
ATL3-202ENST00000535789 ARHGAP27Q6ZUM4 889 aa21.36■■□□□ 1.01
ATL3-202ENST00000535789 ZNF34Q8IZ26 560 aa21.36■■□□□ 1.01
ATL3-202ENST00000535789 RIC1Q4ADV7 1423 aa21.36■■□□□ 1.01
ATL3-202ENST00000535789 H0YIN7 160 aa21.35■■□□□ 1.01
ATL3-202ENST00000535789 HOXB7P09629 217 aa21.35■■□□□ 1.01
ATL3-202ENST00000535789 GPTP24298 496 aa21.35■■□□□ 1.01
ATL3-202ENST00000535789 ST5P78524 1137 aa21.35■■□□□ 1.01
ATL3-202ENST00000535789 RASSF7Q02833 373 aa21.35■■□□□ 1.01
ATL3-202ENST00000535789 DUSP27Q5VZP5 1158 aa21.35■■□□□ 1.01
ATL3-202ENST00000535789 GIGYF2Q6Y7W6 1299 aaKnown RBP21.35■■□□□ 1.01
ATL3-202ENST00000535789 XAGE3Q8WTP9 111 aa21.35■■□□□ 1.01
ATL3-202ENST00000535789 DDX21Q9NR30 783 aaKnown RBP eCLIP21.35■■□□□ 1.01
ATL3-202ENST00000535789 SRGNP10124 158 aa21.34■■□□□ 1.01
ATL3-202ENST00000535789 PDE6BP35913 854 aa21.34■■□□□ 1.01
ATL3-202ENST00000535789 GNAI1P63096 354 aa21.34■■□□□ 1.01
ATL3-202ENST00000535789 CCDC27Q2M243 656 aa21.34■■□□□ 1.01
ATL3-202ENST00000535789 HDGFL1Q5TGJ6 251 aa21.34■■□□□ 1.01
ATL3-202ENST00000535789 WWC1Q8IX03 1113 aa21.34■■□□□ 1.01
ATL3-202ENST00000535789 TTLL6Q8N841 843 aa21.34■■□□□ 1.01
ATL3-202ENST00000535789 KLRG2A4D1S0 409 aaPredicted RBP21.33■■□□□ 1.01
ATL3-202ENST00000535789 NTSR2O95665 410 aa21.33■■□□□ 1.01
ATL3-202ENST00000535789 COPS6Q7L5N1 327 aa21.33■■□□□ 1.01
ATL3-202ENST00000535789 NUTM1Q86Y26 1132 aa21.33■■□□□ 1.01
ATL3-202ENST00000535789 C8orf58Q8NAV2 365 aa21.33■■□□□ 1.01
ATL3-202ENST00000535789 TSR2Q969E8 191 aaKnown RBP21.33■■□□□ 1.01
ATL3-202ENST00000535789 SUSD4Q5VX71 490 aa21.32■■□□□ 1
ATL3-202ENST00000535789 COL4A1P02462 1669 aa21.31■■□□□ 1
ATL3-202ENST00000535789 NFKBIEO00221 500 aa21.31■■□□□ 1
ATL3-202ENST00000535789 AIMP1Q12904 312 aaKnown RBP21.31■■□□□ 1
ATL3-202ENST00000535789 ERFEQ4G0M1 354 aa21.31■■□□□ 1
ATL3-202ENST00000535789 TSPYL6Q8N831 410 aa21.31■■□□□ 1
ATL3-202ENST00000535789 ZNF622Q969S3 477 aaKnown RBP eCLIP21.31■■□□□ 1
ATL3-202ENST00000535789 SNED1Q8TER0 1413 aa21.3■■□□□ 1
ATL3-202ENST00000535789 ELL2O00472 640 aaPredicted RBP21.3■■□□□ 1
ATL3-202ENST00000535789 NPHP1O15259 732 aa21.3■■□□□ 1
ATL3-202ENST00000535789 CALD1Q05682 793 aaKnown RBP21.3■■□□□ 1
ATL3-202ENST00000535789 STYK1Q6J9G0 422 aa21.3■■□□□ 1
ATL3-202ENST00000535789 TPTE2Q6XPS3 522 aa21.3■■□□□ 1
ATL3-202ENST00000535789 PDZRN3Q9UPQ7 1066 aa21.3■■□□□ 1
ATL3-202ENST00000535789 C9orf131Q5VYM1 1079 aa21.29■■□□□ 1
ATL3-202ENST00000535789 PRPF40BQ6NWY9 871 aaKnown RBP21.29■■□□□ 1
ATL3-202ENST00000535789 C3orf67Q6ZVT6 689 aa21.29■■□□□ 1
ATL3-202ENST00000535789 ZNF526Q8TF50 670 aaPredicted RBP21.29■■□□□ 1
ATL3-202ENST00000535789 NCBP3Q53F19 620 aaKnown RBP21.28■■□□□ 1
ATL3-202ENST00000535789 SLC51AQ86UW1 340 aa21.28■■□□□ 1
ATL3-202ENST00000535789 MASTLQ96GX5 879 aa21.28■■□□□ 1
ATL3-202ENST00000535789 DBF4Q9UBU7 674 aaPredicted RBP21.28■■□□□ 1
ATL3-202ENST00000535789 LRRC37AA6NMS7 1700 aa21.27■■□□□ 1
ATL3-202ENST00000535789 C21orf2O43822 256 aa21.27■■□□□ 1
ATL3-202ENST00000535789 CRY2Q49AN0 593 aa21.27■■□□□ 1
ATL3-202ENST00000535789 FAM9BQ8IZU0 186 aa21.27■■□□□ 1
ATL3-202ENST00000535789 ZNF219Q9P2Y4 722 aaPredicted RBP21.27■■□□□ 1
ATL3-202ENST00000535789 MYH3P11055 1940 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms