RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 BCS1LQ9Y276 419 aa12.37□□□□□ -0.43
CDCA3-204ENST00000535406 ARFGEF1Q9Y6D6 1849 aa12.37□□□□□ -0.43
CDCA3-204ENST00000535406 DLEC1Q9Y238 1755 aa12.37□□□□□ -0.43
CDCA3-204ENST00000535406 ZNF652Q9Y2D9 606 aa12.37□□□□□ -0.43
CDCA3-204ENST00000535406 ANP32CO43423 234 aa12.36□□□□□ -0.43
CDCA3-204ENST00000535406 KCNA3P22001 575 aa12.36□□□□□ -0.43
CDCA3-204ENST00000535406 CHRNA5P30532 468 aa12.36□□□□□ -0.43
CDCA3-204ENST00000535406 SETDB2Q96T68 719 aa12.36□□□□□ -0.43
CDCA3-204ENST00000535406 PIM2Q9P1W9 311 aa12.36□□□□□ -0.43
CDCA3-204ENST00000535406 TRIM35Q9UPQ4 493 aa12.36□□□□□ -0.43
CDCA3-204ENST00000535406 ANKRD31Q8N7Z5 1873 aa12.35□□□□□ -0.43
CDCA3-204ENST00000535406 NPHP1O15259 732 aa12.35□□□□□ -0.43
CDCA3-204ENST00000535406 CLEC4GQ6UXB4 293 aa12.35□□□□□ -0.43
CDCA3-204ENST00000535406 CNBD1Q8NA66 436 aa12.35□□□□□ -0.43
CDCA3-204ENST00000535406 ERBB4Q15303 1308 aa12.34□□□□□ -0.43
CDCA3-204ENST00000535406 APAF1O14727 1248 aa12.34□□□□□ -0.43
CDCA3-204ENST00000535406 RGL2O15211 777 aa12.34□□□□□ -0.43
CDCA3-204ENST00000535406 DALRD3Q5D0E6 543 aaKnown RBP12.34□□□□□ -0.43
CDCA3-204ENST00000535406 LAS1LQ9Y4W2 734 aaKnown RBP12.34□□□□□ -0.43
CDCA3-204ENST00000535406 ADCY9O60503 1353 aa12.33□□□□□ -0.44
CDCA3-204ENST00000535406 MYL6BP14649 208 aa12.33□□□□□ -0.44
CDCA3-204ENST00000535406 ST5P78524 1137 aa12.33□□□□□ -0.44
CDCA3-204ENST00000535406 PLCB2Q00722 1185 aa12.33□□□□□ -0.44
CDCA3-204ENST00000535406 CCDC184Q52MB2 194 aa12.33□□□□□ -0.44
CDCA3-204ENST00000535406 PRR5LQ6MZQ0 368 aa12.33□□□□□ -0.44
CDCA3-204ENST00000535406 KIF6Q6ZMV9 814 aa12.33□□□□□ -0.44
CDCA3-204ENST00000535406 NGEFQ8N5V2 710 aa12.33□□□□□ -0.44
CDCA3-204ENST00000535406 RNF39Q9H2S5 420 aa12.33□□□□□ -0.44
CDCA3-204ENST00000535406 COL11A2P13942 1736 aaPredicted RBP12.33□□□□□ -0.44
CDCA3-204ENST00000535406 ATP10DQ9P241 1426 aa12.32□□□□□ -0.44
CDCA3-204ENST00000535406 CHL1O00533 1208 aa12.32□□□□□ -0.44
CDCA3-204ENST00000535406 EIF2S2P20042 333 aaKnown RBP12.32□□□□□ -0.44
CDCA3-204ENST00000535406 NBPF5PQ86XG9 351 aaPredicted RBP12.32□□□□□ -0.44
CDCA3-204ENST00000535406 C2CD5Q86YS7 1000 aa12.32□□□□□ -0.44
CDCA3-204ENST00000535406 IFNLR1Q8IU57 520 aaPredicted RBP12.32□□□□□ -0.44
CDCA3-204ENST00000535406 BRIP1Q9BX63 1249 aa12.32□□□□□ -0.44
CDCA3-204ENST00000535406 MRS2Q9HD23 443 aa12.32□□□□□ -0.44
CDCA3-204ENST00000535406 NIP7Q9Y221 180 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDCA3-204ENST00000535406 MAP3K15Q6ZN16 1313 aa12.32□□□□□ -0.44
CDCA3-204ENST00000535406 NUP98P52948 1817 aa12.31□□□□□ -0.44
CDCA3-204ENST00000535406 H0YIN7 160 aa12.31□□□□□ -0.44
CDCA3-204ENST00000535406 PDE6BP35913 854 aa12.31□□□□□ -0.44
CDCA3-204ENST00000535406 CALD1Q05682 793 aaKnown RBP12.31□□□□□ -0.44
CDCA3-204ENST00000535406 HLFQ16534 295 aa12.31□□□□□ -0.44
CDCA3-204ENST00000535406 ARHGAP27Q6ZUM4 889 aa12.31□□□□□ -0.44
CDCA3-204ENST00000535406 CCDC24Q8N4L8 307 aa12.31□□□□□ -0.44
CDCA3-204ENST00000535406 CFAP44Q96MT7 982 aa12.31□□□□□ -0.44
CDCA3-204ENST00000535406 PDZRN3Q9UPQ7 1066 aa12.31□□□□□ -0.44
CDCA3-204ENST00000535406 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
CDCA3-204ENST00000535406 ERVV-1B6SEH8 477 aa12.3□□□□□ -0.44
CDCA3-204ENST00000535406 CAPN15O75808 1086 aa12.3□□□□□ -0.44
CDCA3-204ENST00000535406 TTLL7Q6ZT98 887 aa12.3□□□□□ -0.44
CDCA3-204ENST00000535406 KRT24Q2M2I5 525 aa12.29□□□□□ -0.44
CDCA3-204ENST00000535406 TTLL6Q8N841 843 aa12.29□□□□□ -0.44
CDCA3-204ENST00000535406 NECTIN2Q92692 538 aa12.29□□□□□ -0.44
CDCA3-204ENST00000535406 ZBTB3Q9H5J0 574 aa12.29□□□□□ -0.44
CDCA3-204ENST00000535406 MBIPQ9NS73 344 aa12.29□□□□□ -0.44
CDCA3-204ENST00000535406 FAM177BA6PVY3 158 aa12.28□□□□□ -0.44
CDCA3-204ENST00000535406 ANXA1P04083 346 aa12.28□□□□□ -0.44
CDCA3-204ENST00000535406 HOXB7P09629 217 aa12.28□□□□□ -0.44
CDCA3-204ENST00000535406 PDIA6Q15084 440 aa12.28□□□□□ -0.44
CDCA3-204ENST00000535406 PROSER3Q2NL68 480 aa12.28□□□□□ -0.44
CDCA3-204ENST00000535406 HDGFL1Q5TGJ6 251 aa12.28□□□□□ -0.44
CDCA3-204ENST00000535406 TPTE2Q6XPS3 522 aa12.28□□□□□ -0.44
CDCA3-204ENST00000535406 ZNF622Q969S3 477 aaKnown RBP eCLIP12.28□□□□□ -0.444e-7■□□□□ 9.1
CDCA3-204ENST00000535406 IFT57Q9NWB7 429 aa12.28□□□□□ -0.44
CDCA3-204ENST00000535406 ARFGEF2Q9Y6D5 1785 aa12.28□□□□□ -0.44
CDCA3-204ENST00000535406 CACNA1SQ13698 1873 aa12.28□□□□□ -0.44
CDCA3-204ENST00000535406 ZNF853P0CG23 659 aa12.27□□□□□ -0.45
CDCA3-204ENST00000535406 GTF2E1P29083 439 aaPredicted RBP12.27□□□□□ -0.45
CDCA3-204ENST00000535406 GNAI1P63096 354 aa12.27□□□□□ -0.45
CDCA3-204ENST00000535406 LRP10Q7Z4F1 713 aa12.27□□□□□ -0.45
CDCA3-204ENST00000535406 ZNF526Q8TF50 670 aaPredicted RBP12.27□□□□□ -0.45
CDCA3-204ENST00000535406 NYXQ9GZU5 481 aa12.27□□□□□ -0.45
CDCA3-204ENST00000535406 GPBP1L1Q9HC44 474 aaPredicted RBP12.27□□□□□ -0.45
CDCA3-204ENST00000535406 IBTKQ9P2D0 1353 aaPredicted RBP12.27□□□□□ -0.45
CDCA3-204ENST00000535406 ANKRD36CQ5JPF3 1778 aa12.26□□□□□ -0.45
CDCA3-204ENST00000535406 TNRC6CQ9HCJ0 1690 aaKnown RBP12.26□□□□□ -0.45
CDCA3-204ENST00000535406 UBN2Q6ZU65 1347 aa12.26□□□□□ -0.45
CDCA3-204ENST00000535406 GPTP24298 496 aa12.26□□□□□ -0.45
CDCA3-204ENST00000535406 GIGYF2Q6Y7W6 1299 aaKnown RBP12.26□□□□□ -0.45
CDCA3-204ENST00000535406 DDX21Q9NR30 783 aaKnown RBP eCLIP12.26□□□□□ -0.45
CDCA3-204ENST00000535406 CHPF2Q9P2E5 772 aa12.26□□□□□ -0.45
CDCA3-204ENST00000535406 ABCC12Q96J65 1359 aa12.25□□□□□ -0.45
CDCA3-204ENST00000535406 SRGNP10124 158 aa12.25□□□□□ -0.45
CDCA3-204ENST00000535406 RASSF7Q02833 373 aa12.25□□□□□ -0.45
CDCA3-204ENST00000535406 AIMP1Q12904 312 aaKnown RBP12.25□□□□□ -0.45
CDCA3-204ENST00000535406 C9orf131Q5VYM1 1079 aa12.25□□□□□ -0.45
CDCA3-204ENST00000535406 DUSP27Q5VZP5 1158 aa12.25□□□□□ -0.45
CDCA3-204ENST00000535406 STYK1Q6J9G0 422 aa12.25□□□□□ -0.45
CDCA3-204ENST00000535406 XAGE3Q8WTP9 111 aa12.25□□□□□ -0.45
CDCA3-204ENST00000535406 CNKSR1Q969H4 720 aa12.25□□□□□ -0.45
CDCA3-204ENST00000535406 MASTLQ96GX5 879 aa12.25□□□□□ -0.45
CDCA3-204ENST00000535406 SBF1O95248 1867 aa12.25□□□□□ -0.45
CDCA3-204ENST00000535406 RIC1Q4ADV7 1423 aa12.24□□□□□ -0.45
CDCA3-204ENST00000535406 SENP3-EIF4A1A0A087X0R7 540 aa12.24□□□□□ -0.45
CDCA3-204ENST00000535406 C1QBPQ07021 282 aaKnown RBP12.24□□□□□ -0.45
CDCA3-204ENST00000535406 CCDC27Q2M243 656 aa12.24□□□□□ -0.45
CDCA3-204ENST00000535406 COPS6Q7L5N1 327 aa12.24□□□□□ -0.45
CDCA3-204ENST00000535406 NUTM1Q86Y26 1132 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms