RNA–Protein interactions for RNA: ENST00000534829.5

SSPN-203, Transcript of sarcospan, humanhuman

TSL 3

Gene SSPN, Length 380 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-203ENST00000534829 PDZRN3Q9UPQ7 1066 aa13.56□□□□□ -0.24
SSPN-203ENST00000534829 HPS5Q9UPZ3 1129 aa13.56□□□□□ -0.24
SSPN-203ENST00000534829 ANKRD26Q9UPS8 1709 aa13.56□□□□□ -0.24
SSPN-203ENST00000534829 COL6A3P12111 3177 aa13.55□□□□□ -0.24
SSPN-203ENST00000534829 CNKSR1Q969H4 720 aa13.55□□□□□ -0.24
SSPN-203ENST00000534829 EYA1Q99502 592 aa13.55□□□□□ -0.24
SSPN-203ENST00000534829 EMILIN1Q9Y6C2 1016 aa13.55□□□□□ -0.24
SSPN-203ENST00000534829 NOGQ13253 232 aa13.54□□□□□ -0.24
SSPN-203ENST00000534829 STYK1Q6J9G0 422 aa13.54□□□□□ -0.24
SSPN-203ENST00000534829 PRR5LQ6MZQ0 368 aa13.54□□□□□ -0.24
SSPN-203ENST00000534829 BICDL1Q6ZP65 573 aa13.54□□□□□ -0.24
SSPN-203ENST00000534829 CTU1Q7Z7A3 348 aaKnown RBP13.54□□□□□ -0.24
SSPN-203ENST00000534829 DNAJC10Q8IXB1 793 aa13.54□□□□□ -0.24
SSPN-203ENST00000534829 L3MBTL2Q969R5 705 aa13.54□□□□□ -0.24
SSPN-203ENST00000534829 CELF2O95319 508 aaKnown RBP13.53□□□□□ -0.24
SSPN-203ENST00000534829 SRGNP10124 158 aa13.53□□□□□ -0.24
SSPN-203ENST00000534829 EPS15P42566 896 aa13.53□□□□□ -0.24
SSPN-203ENST00000534829 SCNN1DP51172 638 aa13.53□□□□□ -0.24
SSPN-203ENST00000534829 CABP4P57796 275 aa13.53□□□□□ -0.24
SSPN-203ENST00000534829 FKBP4Q02790 459 aaKnown RBP eCLIP13.53□□□□□ -0.24
SSPN-203ENST00000534829 CCDC93Q567U6 631 aa13.53□□□□□ -0.24
SSPN-203ENST00000534829 PUS7Q96PZ0 661 aaKnown RBP13.53□□□□□ -0.24
SSPN-203ENST00000534829 SAGE1Q9NXZ1 904 aa13.53□□□□□ -0.24
SSPN-203ENST00000534829 COL4A5P29400 1685 aa13.53□□□□□ -0.24
SSPN-203ENST00000534829 KIF20BQ96Q89 1820 aa13.53□□□□□ -0.24
SSPN-203ENST00000534829 CYP19A1P11511 503 aaPredicted RBP13.51□□□□□ -0.25
SSPN-203ENST00000534829 OLFM4Q6UX06 510 aa13.51□□□□□ -0.25
SSPN-203ENST00000534829 ZBTB1Q9Y2K1 713 aa13.51□□□□□ -0.25
SSPN-203ENST00000534829 HTTP42858 3142 aa13.51□□□□□ -0.25
SSPN-203ENST00000534829 CEP290O15078 2479 aa13.51□□□□□ -0.25
SSPN-203ENST00000534829 SCN7AQ01118 1682 aa13.5□□□□□ -0.25
SSPN-203ENST00000534829 HSP90AB1P08238 724 aaKnown RBP13.5□□□□□ -0.25
SSPN-203ENST00000534829 TBC1D9BQ66K14 1250 aa13.5□□□□□ -0.25
SSPN-203ENST00000534829 USP50Q70EL3 339 aaPredicted RBP13.5□□□□□ -0.25
SSPN-203ENST00000534829 SLC17A8Q8NDX2 589 aa13.5□□□□□ -0.25
SSPN-203ENST00000534829 AKAP11Q9UKA4 1901 aa13.5□□□□□ -0.25
SSPN-203ENST00000534829 LMOD1P29536 600 aaPredicted RBP13.49□□□□□ -0.25
SSPN-203ENST00000534829 IARSP41252 1262 aaKnown RBP13.49□□□□□ -0.25
SSPN-203ENST00000534829 NFATC2IPQ8NCF5 419 aa13.49□□□□□ -0.25
SSPN-203ENST00000534829 MASTLQ96GX5 879 aa13.49□□□□□ -0.25
SSPN-203ENST00000534829 FAM155AB1AL88 458 aaPredicted RBP13.48□□□□□ -0.25
SSPN-203ENST00000534829 TRPA1O75762 1119 aa13.48□□□□□ -0.25
SSPN-203ENST00000534829 AKAP4Q5JQC9 854 aa13.48□□□□□ -0.25
SSPN-203ENST00000534829 GLIS2Q9BZE0 524 aaPredicted RBP13.48□□□□□ -0.25
SSPN-203ENST00000534829 RNF186Q9NXI6 227 aa13.48□□□□□ -0.25
SSPN-203ENST00000534829 GJA3Q9Y6H8 435 aa13.48□□□□□ -0.25
SSPN-203ENST00000534829 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
SSPN-203ENST00000534829 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
SSPN-203ENST00000534829 RANBP2P49792 3224 aaKnown RBP13.47□□□□□ -0.25
SSPN-203ENST00000534829 PPM1GO15355 546 aaPredicted RBP13.46□□□□□ -0.25
SSPN-203ENST00000534829 ZNF408Q9H9D4 720 aa13.46□□□□□ -0.25
SSPN-203ENST00000534829 COLQQ9Y215 455 aaPredicted RBP13.46□□□□□ -0.25
SSPN-203ENST00000534829 CENPFP49454 3210 aa13.46□□□□□ -0.26
SSPN-203ENST00000534829 BRCA2P51587 3418 aa13.46□□□□□ -0.26
SSPN-203ENST00000534829 ZNF530Q6P9A1 599 aaPredicted RBP13.45□□□□□ -0.26
SSPN-203ENST00000534829 RTKN2Q8IZC4 609 aa13.45□□□□□ -0.26
SSPN-203ENST00000534829 SYNE4Q8N205 404 aa13.45□□□□□ -0.26
SSPN-203ENST00000534829 CNBD1Q8NA66 436 aa13.45□□□□□ -0.26
SSPN-203ENST00000534829 ST20-MTHFSA0A0A6YYL1 179 aa13.44□□□□□ -0.26
SSPN-203ENST00000534829 MTHFSP49914 203 aa13.44□□□□□ -0.26
SSPN-203ENST00000534829 HUNKP57058 714 aa13.44□□□□□ -0.26
SSPN-203ENST00000534829 KIF23Q02241 960 aaPredicted RBP13.44□□□□□ -0.26
SSPN-203ENST00000534829 PKN2Q16513 984 aaKnown RBP13.44□□□□□ -0.26
SSPN-203ENST00000534829 EIF6P56537 245 aaKnown RBP13.43□□□□□ -0.26
SSPN-203ENST00000534829 JDP2Q8WYK2 163 aa13.43□□□□□ -0.26
SSPN-203ENST00000534829 KIAA0100Q14667 2235 aaKnown RBP13.43□□□□□ -0.26
SSPN-203ENST00000534829 CANXP27824 592 aaKnown RBP13.42□□□□□ -0.26
SSPN-203ENST00000534829 EIF5P55010 431 aaKnown RBP13.42□□□□□ -0.26
SSPN-203ENST00000534829 ADARB2Q9NS39 739 aaKnown RBP13.42□□□□□ -0.26
SSPN-203ENST00000534829 PGAP2Q9UHJ9 254 aa13.42□□□□□ -0.26
SSPN-203ENST00000534829 NPR1P16066 1061 aa13.41□□□□□ -0.26
SSPN-203ENST00000534829 ST5P78524 1137 aa13.41□□□□□ -0.26
SSPN-203ENST00000534829 EIF4A2Q14240 407 aaKnown RBP13.41□□□□□ -0.26
SSPN-203ENST00000534829 PLEKHO1Q53GL0 409 aaPredicted RBP13.41□□□□□ -0.26
SSPN-203ENST00000534829 RGMBQ6NW40 437 aa13.41□□□□□ -0.26
SSPN-203ENST00000534829 PSMD1Q99460 953 aa13.41□□□□□ -0.26
SSPN-203ENST00000534829 GPRC5DQ9NZD1 345 aa13.41□□□□□ -0.26
SSPN-203ENST00000534829 TESK2Q96S53 571 aa13.4□□□□□ -0.26
SSPN-203ENST00000534829 CARD11Q9BXL7 1154 aa13.4□□□□□ -0.26
SSPN-203ENST00000534829 RBBP6Q7Z6E9 1792 aaKnown RBP13.4□□□□□ -0.26
SSPN-203ENST00000534829 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
SSPN-203ENST00000534829 NPHP1O15259 732 aa13.39□□□□□ -0.27
SSPN-203ENST00000534829 DLK2Q6UY11 383 aa13.39□□□□□ -0.27
SSPN-203ENST00000534829 CSRNP1Q96S65 589 aa13.39□□□□□ -0.27
SSPN-203ENST00000534829 UBR2Q8IWV8 1755 aa13.38□□□□□ -0.27
SSPN-203ENST00000534829 PAPPA2Q9BXP8 1791 aa13.38□□□□□ -0.27
SSPN-203ENST00000534829 MRC1P22897 1456 aa13.38□□□□□ -0.27
SSPN-203ENST00000534829 KLRG2A4D1S0 409 aaPredicted RBP13.38□□□□□ -0.27
SSPN-203ENST00000534829 POTEFA5A3E0 1075 aa13.38□□□□□ -0.27
SSPN-203ENST00000534829 SLC39A6Q13433 755 aa13.38□□□□□ -0.27
SSPN-203ENST00000534829 FBXO46Q6PJ61 603 aaPredicted RBP13.38□□□□□ -0.27
SSPN-203ENST00000534829 SETDB2Q96T68 719 aa13.38□□□□□ -0.27
SSPN-203ENST00000534829 TBC1D2BQ9UPU7 963 aa13.38□□□□□ -0.27
SSPN-203ENST00000534829 A0A087WZG4 1122 aa13.37□□□□□ -0.27
SSPN-203ENST00000534829 HIRAP54198 1017 aaPredicted RBP13.37□□□□□ -0.27
SSPN-203ENST00000534829 AMOTQ4VCS5 1084 aa13.37□□□□□ -0.27
SSPN-203ENST00000534829 C1orf141Q5JVX7 400 aa13.37□□□□□ -0.27
SSPN-203ENST00000534829 CDC37L1Q7L3B6 337 aa13.37□□□□□ -0.27
SSPN-203ENST00000534829 ZNF296Q8WUU4 475 aaPredicted RBP13.37□□□□□ -0.27
SSPN-203ENST00000534829 CCDC102AQ96A19 550 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms