RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 DBN1Q16643 649 aa11.71□□□□□ -0.53
CASP4-213ENST00000534356 PATL2C9JE40 543 aaKnown RBP11.7□□□□□ -0.54
CASP4-213ENST00000534356 C11orf91Q3C1V1 193 aa11.7□□□□□ -0.54
CASP4-213ENST00000534356 LRRC69Q6ZNQ3 347 aa11.7□□□□□ -0.54
CASP4-213ENST00000534356 ZNF280CQ8ND82 737 aa11.7□□□□□ -0.54
CASP4-213ENST00000534356 HELQQ8TDG4 1101 aa11.7□□□□□ -0.54
CASP4-213ENST00000534356 HSH2DQ96JZ2 352 aa11.7□□□□□ -0.54
CASP4-213ENST00000534356 SUSD3Q96L08 255 aa11.7□□□□□ -0.54
CASP4-213ENST00000534356 BCS1LQ9Y276 419 aa11.7□□□□□ -0.54
CASP4-213ENST00000534356 GPC6Q9Y625 555 aaPredicted RBP11.7□□□□□ -0.54
CASP4-213ENST00000534356 TRIM22Q8IYM9 498 aa11.69□□□□□ -0.54
CASP4-213ENST00000534356 VEGFBP49765 207 aa11.68□□□□□ -0.54
CASP4-213ENST00000534356 FAM26DQ5JW98 314 aa11.68□□□□□ -0.54
CASP4-213ENST00000534356 NUCKS1Q9H1E3 243 aaKnown RBP11.68□□□□□ -0.54
CASP4-213ENST00000534356 NEUROD4Q9HD90 331 aa11.68□□□□□ -0.54
CASP4-213ENST00000534356 NXF1Q9UBU9 619 aaKnown RBP11.68□□□□□ -0.54
CASP4-213ENST00000534356 EGFL7Q9UHF1 273 aa11.68□□□□□ -0.54
CASP4-213ENST00000534356 H7C1W4 665 aa11.67□□□□□ -0.54
CASP4-213ENST00000534356 TRIM26Q12899 539 aaPredicted RBP11.67□□□□□ -0.54
CASP4-213ENST00000534356 EFHC2Q5JST6 749 aa11.67□□□□□ -0.54
CASP4-213ENST00000534356 IFT43Q96FT9 208 aa11.67□□□□□ -0.54
CASP4-213ENST00000534356 STIM2Q9P246 746 aa11.67□□□□□ -0.54
CASP4-213ENST00000534356 GJA3Q9Y6H8 435 aa11.67□□□□□ -0.54
CASP4-213ENST00000534356 ICMTO60725 284 aa11.66□□□□□ -0.54
CASP4-213ENST00000534356 FKBP4Q02790 459 aaKnown RBP eCLIP11.66□□□□□ -0.54
CASP4-213ENST00000534356 LBRQ14739 615 aaKnown RBP11.66□□□□□ -0.54
CASP4-213ENST00000534356 NLRP8Q86W28 1048 aa11.66□□□□□ -0.54
CASP4-213ENST00000534356 ZNF837Q96EG3 531 aaPredicted RBP11.66□□□□□ -0.54
CASP4-213ENST00000534356 ANKIB1Q9P2G1 1089 aa11.66□□□□□ -0.54
CASP4-213ENST00000534356 BRD2P25440 801 aaKnown RBP11.65□□□□□ -0.54
CASP4-213ENST00000534356 UBAP2LQ14157 1087 aaKnown RBP11.65□□□□□ -0.54
CASP4-213ENST00000534356 ETFBKMTQ8IXQ9 262 aa11.65□□□□□ -0.54
CASP4-213ENST00000534356 ZBTB7CA1YPR0 619 aa11.64□□□□□ -0.55
CASP4-213ENST00000534356 SOWAHDA6NJG2 315 aa11.64□□□□□ -0.55
CASP4-213ENST00000534356 H3BRB1 525 aa11.64□□□□□ -0.55
CASP4-213ENST00000534356 TGFBR3LH3BV60 316 aa11.64□□□□□ -0.55
CASP4-213ENST00000534356 MPSTP25325 297 aa11.64□□□□□ -0.55
CASP4-213ENST00000534356 SF3B2Q13435 895 aaKnown RBP11.64□□□□□ -0.55
CASP4-213ENST00000534356 HIF1AQ16665 826 aa11.64□□□□□ -0.55
CASP4-213ENST00000534356 VWA5B2Q8N398 1253 aa11.64□□□□□ -0.55
CASP4-213ENST00000534356 ZCCHC2Q9C0B9 1178 aaKnown RBP11.64□□□□□ -0.55
CASP4-213ENST00000534356 TUT1Q9H6E5 874 aaKnown RBP11.64□□□□□ -0.55
CASP4-213ENST00000534356 CDC14CA4D256 554 aa11.63□□□□□ -0.55
CASP4-213ENST00000534356 ZBTB39O15060 712 aa11.63□□□□□ -0.55
CASP4-213ENST00000534356 GTPBP3Q969Y2 492 aaKnown RBP11.63□□□□□ -0.55
CASP4-213ENST00000534356 GMCL1Q96IK5 515 aa11.63□□□□□ -0.55
CASP4-213ENST00000534356 DMGDHQ9UI17 866 aaKnown RBP11.63□□□□□ -0.55
CASP4-213ENST00000534356 MICAL2O94851 1124 aa11.62□□□□□ -0.55
CASP4-213ENST00000534356 NPR3P17342 541 aa11.62□□□□□ -0.55
CASP4-213ENST00000534356 ECM1Q16610 540 aa11.62□□□□□ -0.55
CASP4-213ENST00000534356 IER5Q5VY09 327 aa11.62□□□□□ -0.55
CASP4-213ENST00000534356 BTLAQ7Z6A9 289 aa11.62□□□□□ -0.55
CASP4-213ENST00000534356 TREML1Q86YW5 311 aa11.62□□□□□ -0.55
CASP4-213ENST00000534356 NANOS1Q8WY41 292 aaKnown RBP11.62□□□□□ -0.55
CASP4-213ENST00000534356 H3BM21 787 aa11.61□□□□□ -0.55
CASP4-213ENST00000534356 SAMD5Q5TGI4 173 aa11.61□□□□□ -0.55
CASP4-213ENST00000534356 GLYCTKQ8IVS8 523 aa11.61□□□□□ -0.55
CASP4-213ENST00000534356 GZF1Q9H116 711 aaPredicted RBP11.61□□□□□ -0.55
CASP4-213ENST00000534356 TERTO14746 1132 aaKnown RBP11.6□□□□□ -0.55
CASP4-213ENST00000534356 ATXN7O15265 892 aaPredicted RBP11.6□□□□□ -0.55
CASP4-213ENST00000534356 FIGNL1Q6PIW4 674 aa11.6□□□□□ -0.55
CASP4-213ENST00000534356 SV2AQ7L0J3 742 aa11.6□□□□□ -0.55
CASP4-213ENST00000534356 NPAS3Q8IXF0 933 aa11.6□□□□□ -0.55
CASP4-213ENST00000534356 ABTB2Q8N961 1025 aa11.6□□□□□ -0.55
CASP4-213ENST00000534356 PCDHGC4Q9Y5F7 938 aa11.6□□□□□ -0.55
CASP4-213ENST00000534356 FAM13AO94988 1023 aa11.59□□□□□ -0.55
CASP4-213ENST00000534356 IDH3AP50213 366 aa11.59□□□□□ -0.55
CASP4-213ENST00000534356 TYRO3Q06418 890 aa11.59□□□□□ -0.55
CASP4-213ENST00000534356 CEP63Q96MT8 703 aa11.59□□□□□ -0.55
CASP4-213ENST00000534356 DCDC2BA2VCK2 349 aa11.58□□□□□ -0.56
CASP4-213ENST00000534356 GPR25O00155 361 aa11.58□□□□□ -0.56
CASP4-213ENST00000534356 OPLAHO14841 1288 aa11.58□□□□□ -0.56
CASP4-213ENST00000534356 BNIP3LO60238 219 aa11.58□□□□□ -0.56
CASP4-213ENST00000534356 EIF1AXP47813 144 aaKnown RBP11.58□□□□□ -0.56
CASP4-213ENST00000534356 NOM1Q5C9Z4 860 aaKnown RBP11.58□□□□□ -0.56
CASP4-213ENST00000534356 ATCAYQ86WG3 371 aa11.58□□□□□ -0.56
CASP4-213ENST00000534356 NDFIP2Q9NV92 336 aa11.58□□□□□ -0.56
CASP4-213ENST00000534356 FAM157BP0CG42 384 aa11.57□□□□□ -0.56
CASP4-213ENST00000534356 INPP5BP32019 993 aa11.57□□□□□ -0.56
CASP4-213ENST00000534356 ABHD17AQ96GS6 310 aa11.57□□□□□ -0.56
CASP4-213ENST00000534356 HCN2Q9UL51 889 aa11.57□□□□□ -0.56
CASP4-213ENST00000534356 KHNYNO15037 678 aaKnown RBP11.56□□□□□ -0.56
CASP4-213ENST00000534356 ZAP70P43403 619 aa11.56□□□□□ -0.56
CASP4-213ENST00000534356 ARHGAP4P98171 946 aa11.56□□□□□ -0.56
CASP4-213ENST00000534356 TNP2Q05952 138 aa11.56□□□□□ -0.56
CASP4-213ENST00000534356 GPR161Q8N6U8 529 aaKnown RBP11.56□□□□□ -0.56
CASP4-213ENST00000534356 BRD7Q9NPI1 651 aa11.56□□□□□ -0.56
CASP4-213ENST00000534356 BIN2Q9UBW5 565 aaPredicted RBP11.56□□□□□ -0.56
CASP4-213ENST00000534356 EFSO43281 561 aa11.55□□□□□ -0.56
CASP4-213ENST00000534356 MAPTP10636 758 aaKnown RBP11.55□□□□□ -0.56
CASP4-213ENST00000534356 FOXR1Q6PIV2 292 aa11.55□□□□□ -0.56
CASP4-213ENST00000534356 SND1Q7KZF4 910 aaKnown RBP eCLIP11.55□□□□□ -0.56
CASP4-213ENST00000534356 USP20Q9Y2K6 914 aa11.55□□□□□ -0.56
CASP4-213ENST00000534356 GRNP28799 593 aaKnown RBP11.54□□□□□ -0.56
CASP4-213ENST00000534356 ARSDP51689 593 aa11.54□□□□□ -0.56
CASP4-213ENST00000534356 SFSWAPQ12872 951 aaKnown RBP11.54□□□□□ -0.56
CASP4-213ENST00000534356 ALKBH2Q6NS38 261 aa11.54□□□□□ -0.56
CASP4-213ENST00000534356 CFHR5Q9BXR6 569 aa11.54□□□□□ -0.56
CASP4-213ENST00000534356 STRN4Q9NRL3 753 aa11.54□□□□□ -0.56
CASP4-213ENST00000534356 ERBB4Q15303 1308 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms