RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 PRR5LQ6MZQ0 368 aa24.84■■□□□ 1.57
LRRK1-210ENST00000534045 NBPF5PQ86XG9 351 aaPredicted RBP24.84■■□□□ 1.57
LRRK1-210ENST00000534045 MYL6BP14649 208 aa24.83■■□□□ 1.57
LRRK1-210ENST00000534045 C1QTNF8P60827 252 aa24.83■■□□□ 1.57
LRRK1-210ENST00000534045 KIF6Q6ZMV9 814 aa24.83■■□□□ 1.57
LRRK1-210ENST00000534045 NIP7Q9Y221 180 aaKnown RBP eCLIP24.83■■□□□ 1.57
LRRK1-210ENST00000534045 EIF2S2P20042 333 aaKnown RBP24.82■■□□□ 1.56
LRRK1-210ENST00000534045 GTF2E1P29083 439 aaPredicted RBP24.82■■□□□ 1.56
LRRK1-210ENST00000534045 TPTE2Q6XPS3 522 aa24.82■■□□□ 1.56
LRRK1-210ENST00000534045 DLEC1Q9Y238 1755 aa24.81■■□□□ 1.56
LRRK1-210ENST00000534045 RGL2O15211 777 aa24.81■■□□□ 1.56
LRRK1-210ENST00000534045 ZNF316A6NFI3 1004 aaPredicted RBP24.8■■□□□ 1.56
LRRK1-210ENST00000534045 FAM177BA6PVY3 158 aa24.8■■□□□ 1.56
LRRK1-210ENST00000534045 C9orf131Q5VYM1 1079 aa24.8■■□□□ 1.56
LRRK1-210ENST00000534045 ERVV-1B6SEH8 477 aa24.77■■□□□ 1.56
LRRK1-210ENST00000534045 HLFQ16534 295 aa24.77■■□□□ 1.56
LRRK1-210ENST00000534045 RNF181Q9P0P0 153 aa24.77■■□□□ 1.56
LRRK1-210ENST00000534045 CNKSR1Q969H4 720 aa24.76■■□□□ 1.55
LRRK1-210ENST00000534045 TRIM35Q9UPQ4 493 aa24.76■■□□□ 1.55
LRRK1-210ENST00000534045 ERBB4Q15303 1308 aa24.76■■□□□ 1.55
LRRK1-210ENST00000534045 ADCY9O60503 1353 aa24.76■■□□□ 1.55
LRRK1-210ENST00000534045 ZNF219Q9P2Y4 722 aaPredicted RBP24.75■■□□□ 1.55
LRRK1-210ENST00000534045 MAP3K15Q6ZN16 1313 aa24.75■■□□□ 1.55
LRRK1-210ENST00000534045 CHL1O00533 1208 aa24.74■■□□□ 1.55
LRRK1-210ENST00000534045 ANP32CO43423 234 aa24.74■■□□□ 1.55
LRRK1-210ENST00000534045 TTLL7Q6ZT98 887 aa24.74■■□□□ 1.55
LRRK1-210ENST00000534045 NECTIN2Q92692 538 aa24.74■■□□□ 1.55
LRRK1-210ENST00000534045 MASTLQ96GX5 879 aa24.74■■□□□ 1.55
LRRK1-210ENST00000534045 NYXQ9GZU5 481 aa24.74■■□□□ 1.55
LRRK1-210ENST00000534045 ZBTB3Q9H5J0 574 aa24.74■■□□□ 1.55
LRRK1-210ENST00000534045 ANKRD31Q8N7Z5 1873 aa24.74■■□□□ 1.55
LRRK1-210ENST00000534045 APAF1O14727 1248 aa24.73■■□□□ 1.55
LRRK1-210ENST00000534045 SENP3-EIF4A1A0A087X0R7 540 aa24.72■■□□□ 1.55
LRRK1-210ENST00000534045 CALD1Q05682 793 aaKnown RBP24.72■■□□□ 1.55
LRRK1-210ENST00000534045 STYK1Q6J9G0 422 aa24.72■■□□□ 1.55
LRRK1-210ENST00000534045 CACNA1SQ13698 1873 aa24.71■■□□□ 1.55
LRRK1-210ENST00000534045 C21orf2O43822 256 aa24.71■■□□□ 1.55
LRRK1-210ENST00000534045 SRGNP10124 158 aa24.71■■□□□ 1.55
LRRK1-210ENST00000534045 LMNB1P20700 586 aa24.7■■□□□ 1.54
LRRK1-210ENST00000534045 CFAP44Q96MT7 982 aa24.7■■□□□ 1.54
LRRK1-210ENST00000534045 NPR1P16066 1061 aa24.69■■□□□ 1.54
LRRK1-210ENST00000534045 GPTP24298 496 aa24.69■■□□□ 1.54
LRRK1-210ENST00000534045 RASSF7Q02833 373 aa24.69■■□□□ 1.54
LRRK1-210ENST00000534045 COL11A2P13942 1736 aaPredicted RBP24.69■■□□□ 1.54
LRRK1-210ENST00000534045 NUP98P52948 1817 aa24.68■■□□□ 1.54
LRRK1-210ENST00000534045 KDM2BQ8NHM5 1336 aa24.68■■□□□ 1.54
LRRK1-210ENST00000534045 AIMP1Q12904 312 aaKnown RBP24.68■■□□□ 1.54
LRRK1-210ENST00000534045 SOGA3Q5TF21 947 aa24.68■■□□□ 1.54
LRRK1-210ENST00000534045 ANXA1P04083 346 aa24.67■■□□□ 1.54
LRRK1-210ENST00000534045 GIGYF2Q6Y7W6 1299 aaKnown RBP24.67■■□□□ 1.54
LRRK1-210ENST00000534045 ALDH1B1P30837 517 aa24.66■■□□□ 1.54
LRRK1-210ENST00000534045 PRPF40BQ6NWY9 871 aaKnown RBP24.66■■□□□ 1.54
LRRK1-210ENST00000534045 COPS6Q7L5N1 327 aa24.66■■□□□ 1.54
LRRK1-210ENST00000534045 PPP1R42Q7Z4L9 355 aa24.66■■□□□ 1.54
LRRK1-210ENST00000534045 C16orf71Q8IYS4 520 aaPredicted RBP24.66■■□□□ 1.54
LRRK1-210ENST00000534045 GNAI1P63096 354 aa24.65■■□□□ 1.54
LRRK1-210ENST00000534045 PDIA6Q15084 440 aa24.65■■□□□ 1.54
LRRK1-210ENST00000534045 KRT24Q2M2I5 525 aa24.65■■□□□ 1.54
LRRK1-210ENST00000534045 HDGFL1Q5TGJ6 251 aa24.65■■□□□ 1.54
LRRK1-210ENST00000534045 NUTM1Q86Y26 1132 aa24.65■■□□□ 1.54
LRRK1-210ENST00000534045 DDX21Q9NR30 783 aaKnown RBP eCLIP24.65■■□□□ 1.54
LRRK1-210ENST00000534045 PROSER3Q2NL68 480 aa24.64■■□□□ 1.54
LRRK1-210ENST00000534045 HSP90AB3PQ58FF7 597 aa24.64■■□□□ 1.54
LRRK1-210ENST00000534045 MRS2Q9HD23 443 aa24.64■■□□□ 1.54
LRRK1-210ENST00000534045 SBF1O95248 1867 aa24.64■■□□□ 1.53
LRRK1-210ENST00000534045 KLRG2A4D1S0 409 aaPredicted RBP24.63■■□□□ 1.53
LRRK1-210ENST00000534045 HOXB7P09629 217 aa24.63■■□□□ 1.53
LRRK1-210ENST00000534045 PARP10Q53GL7 1025 aa24.63■■□□□ 1.53
LRRK1-210ENST00000534045 SUSD4Q5VX71 490 aa24.63■■□□□ 1.53
LRRK1-210ENST00000534045 ZNF34Q8IZ26 560 aa24.63■■□□□ 1.53
LRRK1-210ENST00000534045 XAGE3Q8WTP9 111 aa24.63■■□□□ 1.53
LRRK1-210ENST00000534045 ARFGEF2Q9Y6D5 1785 aa24.62■■□□□ 1.53
LRRK1-210ENST00000534045 KIF3CO14782 793 aa24.62■■□□□ 1.53
LRRK1-210ENST00000534045 ERFEQ4G0M1 354 aa24.62■■□□□ 1.53
LRRK1-210ENST00000534045 CCDC184Q52MB2 194 aa24.62■■□□□ 1.53
LRRK1-210ENST00000534045 DUSP27Q5VZP5 1158 aa24.62■■□□□ 1.53
LRRK1-210ENST00000534045 TAOK3Q9H2K8 898 aa24.62■■□□□ 1.53
LRRK1-210ENST00000534045 NMRK2Q9NPI5 230 aa24.62■■□□□ 1.53
LRRK1-210ENST00000534045 MBIPQ9NS73 344 aa24.62■■□□□ 1.53
LRRK1-210ENST00000534045 IFT57Q9NWB7 429 aa24.62■■□□□ 1.53
LRRK1-210ENST00000534045 DBF4Q9UBU7 674 aaPredicted RBP24.62■■□□□ 1.53
LRRK1-210ENST00000534045 CCDC88AQ3V6T2 1871 aa24.62■■□□□ 1.53
LRRK1-210ENST00000534045 ZC3H4Q9UPT8 1303 aaKnown RBP24.61■■□□□ 1.53
LRRK1-210ENST00000534045 NFKBIEO00221 500 aa24.61■■□□□ 1.53
LRRK1-210ENST00000534045 DPY19L2Q6NUT2 758 aa24.61■■□□□ 1.53
LRRK1-210ENST00000534045 RPGRQ92834 1020 aaKnown RBP24.61■■□□□ 1.53
LRRK1-210ENST00000534045 CHPF2Q9P2E5 772 aa24.61■■□□□ 1.53
LRRK1-210ENST00000534045 TOMM70O94826 608 aa24.6■■□□□ 1.53
LRRK1-210ENST00000534045 UTP14AQ9BVJ6 771 aaKnown RBP24.6■■□□□ 1.53
LRRK1-210ENST00000534045 CHMP4AQ9BY43 222 aa24.6■■□□□ 1.53
LRRK1-210ENST00000534045 CCDC93Q567U6 631 aa24.59■■□□□ 1.53
LRRK1-210ENST00000534045 LRP10Q7Z4F1 713 aa24.59■■□□□ 1.53
LRRK1-210ENST00000534045 RRAGCQ9HB90 399 aa24.59■■□□□ 1.53
LRRK1-210ENST00000534045 UBN2Q6ZU65 1347 aa24.59■■□□□ 1.53
LRRK1-210ENST00000534045 ELL2O00472 640 aaPredicted RBP24.58■■□□□ 1.53
LRRK1-210ENST00000534045 NLRP3Q96P20 1036 aa24.58■■□□□ 1.53
LRRK1-210ENST00000534045 HYPKQ9NX55 129 aa24.58■■□□□ 1.53
LRRK1-210ENST00000534045 ANKRD36CQ5JPF3 1778 aa24.57■■□□□ 1.52
LRRK1-210ENST00000534045 ZNF853P0CG23 659 aa24.57■■□□□ 1.52
LRRK1-210ENST00000534045 ANKRD13DQ6ZTN6 518 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms