RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 KDM2BQ8NHM5 1336 aa23.09■■□□□ 1.29
CAPN5-207ENST00000533889 LMNB1P20700 586 aa23.09■■□□□ 1.29
CAPN5-207ENST00000533889 TSPYL4Q9UJ04 414 aa23.09■■□□□ 1.29
CAPN5-207ENST00000533889 KDM3BQ7LBC6 1761 aa23.09■■□□□ 1.29
CAPN5-207ENST00000533889 SBF1O95248 1867 aa23.09■■□□□ 1.29
CAPN5-207ENST00000533889 FAM177BA6PVY3 158 aa23.08■■□□□ 1.29
CAPN5-207ENST00000533889 RGL2O15211 777 aa23.08■■□□□ 1.29
CAPN5-207ENST00000533889 C21orf2O43822 256 aa23.08■■□□□ 1.29
CAPN5-207ENST00000533889 TOMM70O94826 608 aa23.08■■□□□ 1.29
CAPN5-207ENST00000533889 HSPA6P17066 643 aa23.08■■□□□ 1.29
CAPN5-207ENST00000533889 TPTE2Q6XPS3 522 aa23.08■■□□□ 1.29
CAPN5-207ENST00000533889 TMPOP42166 694 aaKnown RBP23.07■■□□□ 1.28
CAPN5-207ENST00000533889 LMOD3Q0VAK6 560 aa23.07■■□□□ 1.28
CAPN5-207ENST00000533889 HLFQ16534 295 aa23.07■■□□□ 1.28
CAPN5-207ENST00000533889 C16orf71Q8IYS4 520 aaPredicted RBP23.07■■□□□ 1.28
CAPN5-207ENST00000533889 CNKSR1Q969H4 720 aa23.07■■□□□ 1.28
CAPN5-207ENST00000533889 LAMB4A4D0S4 1761 aa23.06■■□□□ 1.28
CAPN5-207ENST00000533889 SRGNP10124 158 aa23.06■■□□□ 1.28
CAPN5-207ENST00000533889 MYL6BP14649 208 aa23.06■■□□□ 1.28
CAPN5-207ENST00000533889 WDR43Q15061 677 aaKnown RBP eCLIP23.06■■□□□ 1.28
CAPN5-207ENST00000533889 NEUROD2Q15784 382 aa23.06■■□□□ 1.28
CAPN5-207ENST00000533889 STYK1Q6J9G0 422 aa23.06■■□□□ 1.28
CAPN5-207ENST00000533889 CCDC146Q8IYE0 955 aa23.06■■□□□ 1.28
CAPN5-207ENST00000533889 MASTLQ96GX5 879 aa23.06■■□□□ 1.28
CAPN5-207ENST00000533889 GTF2E1P29083 439 aaPredicted RBP23.05■■□□□ 1.28
CAPN5-207ENST00000533889 KIF6Q6ZMV9 814 aa23.05■■□□□ 1.28
CAPN5-207ENST00000533889 NFKBIEO00221 500 aa23.04■■□□□ 1.28
CAPN5-207ENST00000533889 PRELPP51888 382 aa23.04■■□□□ 1.28
CAPN5-207ENST00000533889 RRAGCQ9HB90 399 aa23.04■■□□□ 1.28
CAPN5-207ENST00000533889 COL11A2P13942 1736 aaPredicted RBP23.04■■□□□ 1.28
CAPN5-207ENST00000533889 ZC3H4Q9UPT8 1303 aaKnown RBP23.04■■□□□ 1.28
CAPN5-207ENST00000533889 ERVV-1B6SEH8 477 aa23.03■■□□□ 1.28
CAPN5-207ENST00000533889 CEP350Q5VT06 3117 aa23.03■■□□□ 1.28
CAPN5-207ENST00000533889 PRPF40BQ6NWY9 871 aaKnown RBP23.02■■□□□ 1.28
CAPN5-207ENST00000533889 TTLL7Q6ZT98 887 aa23.02■■□□□ 1.28
CAPN5-207ENST00000533889 BABAM1Q9NWV8 329 aa23.02■■□□□ 1.28
CAPN5-207ENST00000533889 MAP3K15Q6ZN16 1313 aa23.02■■□□□ 1.28
CAPN5-207ENST00000533889 EIF2S2P20042 333 aaKnown RBP23.01■■□□□ 1.27
CAPN5-207ENST00000533889 RUNDC1Q96C34 613 aa23.01■■□□□ 1.27
CAPN5-207ENST00000533889 NPR1P16066 1061 aa23■■□□□ 1.27
CAPN5-207ENST00000533889 ZBTB3Q9H5J0 574 aa23■■□□□ 1.27
CAPN5-207ENST00000533889 ADAMTS8Q9UP79 889 aa23■■□□□ 1.27
CAPN5-207ENST00000533889 CCDC88AQ3V6T2 1871 aa23■■□□□ 1.27
CAPN5-207ENST00000533889 SOGA3Q5TF21 947 aa22.99■■□□□ 1.27
CAPN5-207ENST00000533889 RBM46Q8TBY0 533 aaKnown RBP22.99■■□□□ 1.27
CAPN5-207ENST00000533889 NYXQ9GZU5 481 aa22.99■■□□□ 1.27
CAPN5-207ENST00000533889 TAOK3Q9H2K8 898 aa22.99■■□□□ 1.27
CAPN5-207ENST00000533889 PRKRIP1Q9H875 184 aaPredicted RBP22.99■■□□□ 1.27
CAPN5-207ENST00000533889 ERBB4Q15303 1308 aa22.99■■□□□ 1.27
CAPN5-207ENST00000533889 SLX4Q8IY92 1834 aa22.98■■□□□ 1.27
CAPN5-207ENST00000533889 KLRG2A4D1S0 409 aaPredicted RBP22.98■■□□□ 1.27
CAPN5-207ENST00000533889 GLTPD2A6NH11 291 aa22.98■■□□□ 1.27
CAPN5-207ENST00000533889 LAS1LQ9Y4W2 734 aaKnown RBP22.98■■□□□ 1.27
CAPN5-207ENST00000533889 CACNA1SQ13698 1873 aa22.97■■□□□ 1.27
CAPN5-207ENST00000533889 GPTP24298 496 aa22.97■■□□□ 1.27
CAPN5-207ENST00000533889 ERFEQ4G0M1 354 aa22.97■■□□□ 1.27
CAPN5-207ENST00000533889 DPY19L2Q6NUT2 758 aa22.97■■□□□ 1.27
CAPN5-207ENST00000533889 NUTM1Q86Y26 1132 aa22.96■■□□□ 1.27
CAPN5-207ENST00000533889 NUP98P52948 1817 aa22.96■■□□□ 1.27
CAPN5-207ENST00000533889 APLP1P51693 650 aa22.95■■□□□ 1.26
CAPN5-207ENST00000533889 FER1L6Q2WGJ9 1857 aa22.95■■□□□ 1.26
CAPN5-207ENST00000533889 NECTIN2Q92692 538 aa22.95■■□□□ 1.26
CAPN5-207ENST00000533889 LTBP3Q9NS15 1303 aa22.95■■□□□ 1.26
CAPN5-207ENST00000533889 TRIM35Q9UPQ4 493 aa22.95■■□□□ 1.26
CAPN5-207ENST00000533889 TNRC6CQ9HCJ0 1690 aaKnown RBP22.94■■□□□ 1.26
CAPN5-207ENST00000533889 VEGFAP15692 232 aaPredicted RBP22.94■■□□□ 1.26
CAPN5-207ENST00000533889 ALDH1B1P30837 517 aa22.94■■□□□ 1.26
CAPN5-207ENST00000533889 CHL1O00533 1208 aa22.93■■□□□ 1.26
CAPN5-207ENST00000533889 ANXA1P04083 346 aa22.93■■□□□ 1.26
CAPN5-207ENST00000533889 FSTL1Q12841 308 aa22.93■■□□□ 1.26
CAPN5-207ENST00000533889 PDIA6Q15084 440 aa22.93■■□□□ 1.26
CAPN5-207ENST00000533889 CCDC93Q567U6 631 aa22.93■■□□□ 1.26
CAPN5-207ENST00000533889 GIGYF2Q6Y7W6 1299 aaKnown RBP22.93■■□□□ 1.26
CAPN5-207ENST00000533889 C7orf43Q8WVR3 580 aa22.93■■□□□ 1.26
CAPN5-207ENST00000533889 TIAM2Q8IVF5 1701 aa22.93■■□□□ 1.26
CAPN5-207ENST00000533889 ARFGEF2Q9Y6D5 1785 aa22.92■■□□□ 1.26
CAPN5-207ENST00000533889 PROSER3Q2NL68 480 aa22.92■■□□□ 1.26
CAPN5-207ENST00000533889 SUSD4Q5VX71 490 aa22.92■■□□□ 1.26
CAPN5-207ENST00000533889 ZNF34Q8IZ26 560 aa22.92■■□□□ 1.26
CAPN5-207ENST00000533889 UBN2Q6ZU65 1347 aa22.91■■□□□ 1.26
CAPN5-207ENST00000533889 ABCC12Q96J65 1359 aa22.9■■□□□ 1.26
CAPN5-207ENST00000533889 AIMP1Q12904 312 aaKnown RBP22.9■■□□□ 1.26
CAPN5-207ENST00000533889 LRP10Q7Z4F1 713 aa22.9■■□□□ 1.26
CAPN5-207ENST00000533889 PPP1R42Q7Z4L9 355 aa22.9■■□□□ 1.26
CAPN5-207ENST00000533889 RPGRQ92834 1020 aaKnown RBP22.9■■□□□ 1.26
CAPN5-207ENST00000533889 DICER1Q9UPY3 1922 aaKnown RBP22.89■■□□□ 1.25
CAPN5-207ENST00000533889 KRT24Q2M2I5 525 aa22.89■■□□□ 1.25
CAPN5-207ENST00000533889 PARP10Q53GL7 1025 aa22.89■■□□□ 1.25
CAPN5-207ENST00000533889 OLFM4Q6UX06 510 aa22.89■■□□□ 1.25
CAPN5-207ENST00000533889 COPS6Q7L5N1 327 aa22.89■■□□□ 1.25
CAPN5-207ENST00000533889 RTKN2Q8IZC4 609 aa22.89■■□□□ 1.25
CAPN5-207ENST00000533889 SMC1BQ8NDV3 1235 aa22.89■■□□□ 1.25
CAPN5-207ENST00000533889 IBTKQ9P2D0 1353 aaPredicted RBP22.89■■□□□ 1.25
CAPN5-207ENST00000533889 FKBP4Q02790 459 aaKnown RBP eCLIP22.88■■□□□ 1.25
CAPN5-207ENST00000533889 CRY2Q49AN0 593 aa22.88■■□□□ 1.25
CAPN5-207ENST00000533889 XAGE3Q8WTP9 111 aa22.88■■□□□ 1.25
CAPN5-207ENST00000533889 NTSR2O95665 410 aa22.87■■□□□ 1.25
CAPN5-207ENST00000533889 DDX21Q9NR30 783 aaKnown RBP eCLIP22.87■■□□□ 1.25
CAPN5-207ENST00000533889 UTP14AQ9BVJ6 771 aaKnown RBP22.86■■□□□ 1.25
CAPN5-207ENST00000533889 ZNF277Q9NRM2 450 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms