RNA–Protein interactions for RNA: ENST00000533671.1

NXF1-217, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-217ENST00000533671 N4BP2Q86UW6 1770 aaPredicted RBP22.63■■□□□ 1.21
NXF1-217ENST00000533671 TGFB2P61812 414 aa22.62■■□□□ 1.21
NXF1-217ENST00000533671 TTLL7Q6ZT98 887 aa22.62■■□□□ 1.21
NXF1-217ENST00000533671 CHMP4AQ9BY43 222 aa22.62■■□□□ 1.21
NXF1-217ENST00000533671 CARMIL3Q8ND23 1372 aa22.62■■□□□ 1.21
NXF1-217ENST00000533671 MAP3K15Q6ZN16 1313 aa22.61■■□□□ 1.21
NXF1-217ENST00000533671 ZBTB3Q9H5J0 574 aa22.61■■□□□ 1.21
NXF1-217ENST00000533671 DDX21Q9NR30 783 aaKnown RBP eCLIP22.61■■□□□ 1.21
NXF1-217ENST00000533671 ERVV-1B6SEH8 477 aa22.6■■□□□ 1.21
NXF1-217ENST00000533671 AIMP1Q12904 312 aaKnown RBP22.6■■□□□ 1.21
NXF1-217ENST00000533671 PDIA6Q15084 440 aa22.6■■□□□ 1.21
NXF1-217ENST00000533671 PROSER3Q2NL68 480 aa22.6■■□□□ 1.21
NXF1-217ENST00000533671 CHPF2Q9P2E5 772 aa22.6■■□□□ 1.21
NXF1-217ENST00000533671 DBF4Q9UBU7 674 aaPredicted RBP22.6■■□□□ 1.21
NXF1-217ENST00000533671 WWC3Q9ULE0 1092 aa22.6■■□□□ 1.21
NXF1-217ENST00000533671 NIP7Q9Y221 180 aaKnown RBP eCLIP22.6■■□□□ 1.21
NXF1-217ENST00000533671 NRXN2Q9P2S2 1712 aa22.6■■□□□ 1.21
NXF1-217ENST00000533671 RGL2O15211 777 aa22.59■■□□□ 1.21
NXF1-217ENST00000533671 HLFQ16534 295 aa22.59■■□□□ 1.21
NXF1-217ENST00000533671 C8orf58Q8NAV2 365 aa22.59■■□□□ 1.21
NXF1-217ENST00000533671 A0A0G2JLW4 131 aa22.58■■□□□ 1.21
NXF1-217ENST00000533671 COPS6Q7L5N1 327 aa22.58■■□□□ 1.21
NXF1-217ENST00000533671 NBPF5PQ86XG9 351 aaPredicted RBP22.57■■□□□ 1.2
NXF1-217ENST00000533671 CNBD1Q8NA66 436 aa22.57■■□□□ 1.2
NXF1-217ENST00000533671 XAGE3Q8WTP9 111 aa22.57■■□□□ 1.2
NXF1-217ENST00000533671 PXDNLA1KZ92 1463 aa22.56■■□□□ 1.2
NXF1-217ENST00000533671 FAM177BA6PVY3 158 aa22.56■■□□□ 1.2
NXF1-217ENST00000533671 DPEP1P16444 411 aa22.56■■□□□ 1.2
NXF1-217ENST00000533671 ST5P78524 1137 aa22.56■■□□□ 1.2
NXF1-217ENST00000533671 GOLGA2Q08379 1002 aa22.56■■□□□ 1.2
NXF1-217ENST00000533671 CCDC30Q5VVM6 783 aa22.56■■□□□ 1.2
NXF1-217ENST00000533671 MYH16Q9H6N6 1097 aa22.56■■□□□ 1.2
NXF1-217ENST00000533671 HYPKQ9NX55 129 aa22.56■■□□□ 1.2
NXF1-217ENST00000533671 FANCIQ9NVI1 1328 aa22.56■■□□□ 1.2
NXF1-217ENST00000533671 KIAA1551Q9HCM1 1747 aa22.55■■□□□ 1.2
NXF1-217ENST00000533671 GTF2E1P29083 439 aaPredicted RBP22.55■■□□□ 1.2
NXF1-217ENST00000533671 TWISTNBQ3B726 338 aaPredicted RBP22.55■■□□□ 1.2
NXF1-217ENST00000533671 TSPYL6Q8N831 410 aa22.55■■□□□ 1.2
NXF1-217ENST00000533671 GRIN3BO60391 1043 aa22.54■■□□□ 1.2
NXF1-217ENST00000533671 PRR5LQ6MZQ0 368 aa22.54■■□□□ 1.2
NXF1-217ENST00000533671 TPTE2Q6XPS3 522 aa22.54■■□□□ 1.2
NXF1-217ENST00000533671 GIGYF2Q6Y7W6 1299 aaKnown RBP22.54■■□□□ 1.2
NXF1-217ENST00000533671 LRP10Q7Z4F1 713 aa22.54■■□□□ 1.2
NXF1-217ENST00000533671 CCDC24Q8N4L8 307 aa22.54■■□□□ 1.2
NXF1-217ENST00000533671 CHD4Q14839 1912 aa22.53■■□□□ 1.2
NXF1-217ENST00000533671 GPTP24298 496 aa22.53■■□□□ 1.2
NXF1-217ENST00000533671 STK31Q9BXU1 1019 aa22.53■■□□□ 1.2
NXF1-217ENST00000533671 YBX3P16989 372 aaKnown RBP eCLIP22.52■■□□□ 1.2
NXF1-217ENST00000533671 CHRNA5P30532 468 aa22.52■■□□□ 1.2
NXF1-217ENST00000533671 PDE6BP35913 854 aa22.52■■□□□ 1.2
NXF1-217ENST00000533671 PIM2Q9P1W9 311 aa22.52■■□□□ 1.2
NXF1-217ENST00000533671 BCS1LQ9Y276 419 aa22.52■■□□□ 1.2
NXF1-217ENST00000533671 H0YIN7 160 aa22.51■■□□□ 1.19
NXF1-217ENST00000533671 HSP90AB3PQ58FF7 597 aa22.51■■□□□ 1.19
NXF1-217ENST00000533671 C2CD5Q86YS7 1000 aa22.51■■□□□ 1.19
NXF1-217ENST00000533671 BRIP1Q9BX63 1249 aa22.51■■□□□ 1.19
NXF1-217ENST00000533671 NYXQ9GZU5 481 aa22.51■■□□□ 1.19
NXF1-217ENST00000533671 BRCA1P38398 1863 aaKnown RBP22.51■■□□□ 1.19
NXF1-217ENST00000533671 ANKRD31Q8N7Z5 1873 aa22.51■■□□□ 1.19
NXF1-217ENST00000533671 ANKRD36CQ5JPF3 1778 aa22.5■■□□□ 1.19
NXF1-217ENST00000533671 ATP10DQ9P241 1426 aa22.5■■□□□ 1.19
NXF1-217ENST00000533671 EXOSC9Q06265 439 aaKnown RBP22.5■■□□□ 1.19
NXF1-217ENST00000533671 ANKRD13DQ6ZTN6 518 aa22.5■■□□□ 1.19
NXF1-217ENST00000533671 PPP1R42Q7Z4L9 355 aa22.49■■□□□ 1.19
NXF1-217ENST00000533671 PLBD2Q8NHP8 589 aa22.49■■□□□ 1.19
NXF1-217ENST00000533671 SPINK5Q9NQ38 1064 aaPredicted RBP22.49■■□□□ 1.19
NXF1-217ENST00000533671 PDZRN3Q9UPQ7 1066 aa22.49■■□□□ 1.19
NXF1-217ENST00000533671 CACNA1FO60840 1977 aa22.49■■□□□ 1.19
NXF1-217ENST00000533671 TCERG1O14776 1098 aaKnown RBP22.48■■□□□ 1.19
NXF1-217ENST00000533671 PARP10Q53GL7 1025 aa22.48■■□□□ 1.19
NXF1-217ENST00000533671 RIC3Q7Z5B4 369 aa22.48■■□□□ 1.19
NXF1-217ENST00000533671 ZNF34Q8IZ26 560 aa22.48■■□□□ 1.19
NXF1-217ENST00000533671 PHAXQ9H814 394 aaKnown RBP22.48■■□□□ 1.19
NXF1-217ENST00000533671 ZNF521Q96K83 1311 aa22.48■■□□□ 1.19
NXF1-217ENST00000533671 KCNA3P22001 575 aa22.47■■□□□ 1.19
NXF1-217ENST00000533671 DALRD3Q5D0E6 543 aaKnown RBP22.47■■□□□ 1.19
NXF1-217ENST00000533671 ZNF622Q969S3 477 aaKnown RBP eCLIP22.47■■□□□ 1.193e-8■■□□□ 12
NXF1-217ENST00000533671 DLEC1Q9Y238 1755 aa22.47■■□□□ 1.19
NXF1-217ENST00000533671 DDX58O95786 925 aaKnown RBP22.46■■□□□ 1.19
NXF1-217ENST00000533671 TCIRG1Q13488 830 aa22.46■■□□□ 1.19
NXF1-217ENST00000533671 UBN2Q6ZU65 1347 aa22.46■■□□□ 1.19
NXF1-217ENST00000533671 ARFGEF2Q9Y6D5 1785 aa22.45■■□□□ 1.19
NXF1-217ENST00000533671 ARFGEF1Q9Y6D6 1849 aa22.45■■□□□ 1.19
NXF1-217ENST00000533671 E9PSI1 815 aa22.45■■□□□ 1.18
NXF1-217ENST00000533671 YY1P25490 414 aa22.45■■□□□ 1.18
NXF1-217ENST00000533671 SUSD4Q5VX71 490 aa22.45■■□□□ 1.18
NXF1-217ENST00000533671 VAMP4O75379 141 aa22.44■■□□□ 1.18
NXF1-217ENST00000533671 SLC4A2P04920 1241 aa22.44■■□□□ 1.18
NXF1-217ENST00000533671 CACNA1SQ13698 1873 aa22.44■■□□□ 1.18
NXF1-217ENST00000533671 NUTM1Q86Y26 1132 aa22.44■■□□□ 1.18
NXF1-217ENST00000533671 UTP14AQ9BVJ6 771 aaKnown RBP22.44■■□□□ 1.18
NXF1-217ENST00000533671 TTLL6Q8N841 843 aa22.43■■□□□ 1.18
NXF1-217ENST00000533671 IBTKQ9P2D0 1353 aaPredicted RBP22.42■■□□□ 1.18
NXF1-217ENST00000533671 ERFEQ4G0M1 354 aa22.42■■□□□ 1.18
NXF1-217ENST00000533671 COL11A2P13942 1736 aaPredicted RBP22.42■■□□□ 1.18
NXF1-217ENST00000533671 ARHGAP27Q6ZUM4 889 aa22.41■■□□□ 1.18
NXF1-217ENST00000533671 NLRP10Q86W26 655 aa22.41■■□□□ 1.18
NXF1-217ENST00000533671 MASTLQ96GX5 879 aa22.41■■□□□ 1.18
NXF1-217ENST00000533671 ATP5J2-PTCD1G3V325 749 aa22.4■■□□□ 1.18
NXF1-217ENST00000533671 NTSR2O95665 410 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms