RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 DPEP1P16444 411 aa22.22■■□□□ 1.15
CTSB-229ENST00000533572 EIF2S2P20042 333 aaKnown RBP22.22■■□□□ 1.15
CTSB-229ENST00000533572 SLFN5Q08AF3 891 aa22.22■■□□□ 1.15
CTSB-229ENST00000533572 YTHDC1Q96MU7 727 aaKnown RBP22.22■■□□□ 1.15
CTSB-229ENST00000533572 CHMP4AQ9BY43 222 aa22.22■■□□□ 1.15
CTSB-229ENST00000533572 CHD4Q14839 1912 aa22.21■■□□□ 1.15
CTSB-229ENST00000533572 BCORQ6W2J9 1755 aa22.21■■□□□ 1.15
CTSB-229ENST00000533572 MYL6BP14649 208 aa22.21■■□□□ 1.15
CTSB-229ENST00000533572 CLEC4GQ6UXB4 293 aa22.21■■□□□ 1.15
CTSB-229ENST00000533572 KIF6Q6ZMV9 814 aa22.21■■□□□ 1.15
CTSB-229ENST00000533572 N4BP2Q86UW6 1770 aaPredicted RBP22.2■■□□□ 1.14
CTSB-229ENST00000533572 BCS1LQ9Y276 419 aa22.2■■□□□ 1.14
CTSB-229ENST00000533572 FANCIQ9NVI1 1328 aa22.19■■□□□ 1.14
CTSB-229ENST00000533572 AFDNP55196 1824 aaKnown RBP22.19■■□□□ 1.14
CTSB-229ENST00000533572 RGL2O15211 777 aa22.18■■□□□ 1.14
CTSB-229ENST00000533572 HOXB7P09629 217 aa22.18■■□□□ 1.14
CTSB-229ENST00000533572 TRMT2AQ8IZ69 625 aaKnown RBP22.18■■□□□ 1.14
CTSB-229ENST00000533572 PIM2Q9P1W9 311 aa22.18■■□□□ 1.14
CTSB-229ENST00000533572 KIAA1551Q9HCM1 1747 aa22.17■■□□□ 1.14
CTSB-229ENST00000533572 NRXN2Q9P2S2 1712 aa22.17■■□□□ 1.14
CTSB-229ENST00000533572 CNBD1Q8NA66 436 aa22.17■■□□□ 1.14
CTSB-229ENST00000533572 ZNF784Q8NCA9 323 aaPredicted RBP22.17■■□□□ 1.14
CTSB-229ENST00000533572 GOLGB1Q14789 3259 aaKnown RBP22.17■■□□□ 1.14
CTSB-229ENST00000533572 CHRNA5P30532 468 aa22.16■■□□□ 1.14
CTSB-229ENST00000533572 ST5P78524 1137 aa22.16■■□□□ 1.14
CTSB-229ENST00000533572 NECTIN2Q92692 538 aa22.16■■□□□ 1.14
CTSB-229ENST00000533572 TSR2Q969E8 191 aaKnown RBP22.16■■□□□ 1.14
CTSB-229ENST00000533572 SPINK5Q9NQ38 1064 aaPredicted RBP22.16■■□□□ 1.14
CTSB-229ENST00000533572 NIP7Q9Y221 180 aaKnown RBP eCLIP22.16■■□□□ 1.143e-7■■■■□ 21.9
CTSB-229ENST00000533572 MAP3K15Q6ZN16 1313 aa22.15■■□□□ 1.14
CTSB-229ENST00000533572 NBPF5PQ86XG9 351 aaPredicted RBP22.15■■□□□ 1.14
CTSB-229ENST00000533572 CDCA7LQ96GN5 454 aa22.15■■□□□ 1.14
CTSB-229ENST00000533572 ERVV-1B6SEH8 477 aa22.14■■□□□ 1.13
CTSB-229ENST00000533572 CT47B1P0C2W7 299 aaPredicted RBP22.14■■□□□ 1.13
CTSB-229ENST00000533572 KRT24Q2M2I5 525 aa22.14■■□□□ 1.13
CTSB-229ENST00000533572 DALRD3Q5D0E6 543 aaKnown RBP22.14■■□□□ 1.13
CTSB-229ENST00000533572 HDGFL1Q5TGJ6 251 aa22.14■■□□□ 1.13
CTSB-229ENST00000533572 DUSP27Q5VZP5 1158 aa22.14■■□□□ 1.13
CTSB-229ENST00000533572 PRR5LQ6MZQ0 368 aa22.14■■□□□ 1.13
CTSB-229ENST00000533572 H0YIN7 160 aa22.13■■□□□ 1.13
CTSB-229ENST00000533572 PDE6BP35913 854 aa22.13■■□□□ 1.13
CTSB-229ENST00000533572 TTLL7Q6ZT98 887 aa22.13■■□□□ 1.13
CTSB-229ENST00000533572 C2CD5Q86YS7 1000 aa22.13■■□□□ 1.13
CTSB-229ENST00000533572 ZBTB3Q9H5J0 574 aa22.13■■□□□ 1.13
CTSB-229ENST00000533572 PDZRN3Q9UPQ7 1066 aa22.13■■□□□ 1.13
CTSB-229ENST00000533572 HLFQ16534 295 aa22.12■■□□□ 1.13
CTSB-229ENST00000533572 BRIP1Q9BX63 1249 aa22.12■■□□□ 1.13
CTSB-229ENST00000533572 KCNA3P22001 575 aa22.11■■□□□ 1.13
CTSB-229ENST00000533572 GTF2E1P29083 439 aaPredicted RBP22.11■■□□□ 1.13
CTSB-229ENST00000533572 EXOSC9Q06265 439 aaKnown RBP22.11■■□□□ 1.13
CTSB-229ENST00000533572 CCDC24Q8N4L8 307 aa22.11■■□□□ 1.13
CTSB-229ENST00000533572 ZNF428Q96B54 188 aa22.11■■□□□ 1.13
CTSB-229ENST00000533572 FAM177BA6PVY3 158 aa22.1■■□□□ 1.13
CTSB-229ENST00000533572 ANXA1P04083 346 aa22.1■■□□□ 1.13
CTSB-229ENST00000533572 BRCA1P38398 1863 aaKnown RBP22.1■■□□□ 1.13
CTSB-229ENST00000533572 TWISTNBQ3B726 338 aaPredicted RBP22.1■■□□□ 1.13
CTSB-229ENST00000533572 TPTE2Q6XPS3 522 aa22.1■■□□□ 1.13
CTSB-229ENST00000533572 DDX21Q9NR30 783 aaKnown RBP eCLIP22.1■■□□□ 1.13
CTSB-229ENST00000533572 AIMP1Q12904 312 aaKnown RBP22.09■■□□□ 1.13
CTSB-229ENST00000533572 PDIA6Q15084 440 aa22.09■■□□□ 1.13
CTSB-229ENST00000533572 PROSER3Q2NL68 480 aa22.09■■□□□ 1.13
CTSB-229ENST00000533572 ARHGAP27Q6ZUM4 889 aa22.09■■□□□ 1.13
CTSB-229ENST00000533572 ATP10DQ9P241 1426 aa22.08■■□□□ 1.13
CTSB-229ENST00000533572 C8orf58Q8NAV2 365 aa22.08■■□□□ 1.13
CTSB-229ENST00000533572 ZNF622Q969S3 477 aaKnown RBP eCLIP22.08■■□□□ 1.13
CTSB-229ENST00000533572 NYXQ9GZU5 481 aa22.08■■□□□ 1.13
CTSB-229ENST00000533572 CHPF2Q9P2E5 772 aa22.08■■□□□ 1.13
CTSB-229ENST00000533572 DBF4Q9UBU7 674 aaPredicted RBP22.08■■□□□ 1.13
CTSB-229ENST00000533572 GIGYF2Q6Y7W6 1299 aaKnown RBP22.07■■□□□ 1.12
CTSB-229ENST00000533572 COPS6Q7L5N1 327 aa22.07■■□□□ 1.12
CTSB-229ENST00000533572 TTLL6Q8N841 843 aa22.07■■□□□ 1.12
CTSB-229ENST00000533572 XAGE3Q8WTP9 111 aa22.07■■□□□ 1.12
CTSB-229ENST00000533572 NUP98P52948 1817 aa22.06■■□□□ 1.12
CTSB-229ENST00000533572 ELL2O00472 640 aaPredicted RBP22.06■■□□□ 1.12
CTSB-229ENST00000533572 GPTP24298 496 aa22.06■■□□□ 1.12
CTSB-229ENST00000533572 CCDC30Q5VVM6 783 aa22.06■■□□□ 1.12
CTSB-229ENST00000533572 LRP10Q7Z4F1 713 aa22.06■■□□□ 1.12
CTSB-229ENST00000533572 ARFGEF1Q9Y6D6 1849 aa22.06■■□□□ 1.12
CTSB-229ENST00000533572 HSP90AB3PQ58FF7 597 aa22.05■■□□□ 1.12
CTSB-229ENST00000533572 ANKRD31Q8N7Z5 1873 aa22.05■■□□□ 1.12
CTSB-229ENST00000533572 DLEC1Q9Y238 1755 aa22.04■■□□□ 1.12
CTSB-229ENST00000533572 VAMP4O75379 141 aa22.04■■□□□ 1.12
CTSB-229ENST00000533572 TSPYL6Q8N831 410 aa22.04■■□□□ 1.12
CTSB-229ENST00000533572 HYPKQ9NX55 129 aa22.04■■□□□ 1.12
CTSB-229ENST00000533572 PARP10Q53GL7 1025 aa22.03■■□□□ 1.12
CTSB-229ENST00000533572 PPP1R42Q7Z4L9 355 aa22.03■■□□□ 1.12
CTSB-229ENST00000533572 IBTKQ9P2D0 1353 aaPredicted RBP22.02■■□□□ 1.12
CTSB-229ENST00000533572 CNKSR1Q969H4 720 aa22.02■■□□□ 1.12
CTSB-229ENST00000533572 MASTLQ96GX5 879 aa22.02■■□□□ 1.12
CTSB-229ENST00000533572 STK31Q9BXU1 1019 aa22.02■■□□□ 1.12
CTSB-229ENST00000533572 C1QTNF8P60827 252 aa22.01■■□□□ 1.11
CTSB-229ENST00000533572 ALDH1L2Q3SY69 923 aa22.01■■□□□ 1.11
CTSB-229ENST00000533572 STYK1Q6J9G0 422 aa22.01■■□□□ 1.11
CTSB-229ENST00000533572 ZNF34Q8IZ26 560 aa22.01■■□□□ 1.11
CTSB-229ENST00000533572 COL11A2P13942 1736 aaPredicted RBP22■■□□□ 1.11
CTSB-229ENST00000533572 SRGNP10124 158 aa22■■□□□ 1.11
CTSB-229ENST00000533572 NUTM1Q86Y26 1132 aa22■■□□□ 1.11
CTSB-229ENST00000533572 UBN2Q6ZU65 1347 aa22■■□□□ 1.11
CTSB-229ENST00000533572 SUSD4Q5VX71 490 aa21.99■■□□□ 1.11
CTSB-229ENST00000533572 PLBD2Q8NHP8 589 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms