RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 LRP10Q7Z4F1 713 aa22.3■■□□□ 1.16
NXF1-216ENST00000533499 RIC3Q7Z5B4 369 aa22.3■■□□□ 1.16
NXF1-216ENST00000533499 USP42Q9H9J4 1324 aaKnown RBP22.3■■□□□ 1.16
NXF1-216ENST00000533499 DDX58O95786 925 aaKnown RBP22.29■■□□□ 1.16
NXF1-216ENST00000533499 BICDL1Q6ZP65 573 aa22.29■■□□□ 1.16
NXF1-216ENST00000533499 ATF5Q9Y2D1 282 aaPredicted RBP22.29■■□□□ 1.16
NXF1-216ENST00000533499 MAP3K15Q6ZN16 1313 aa22.29■■□□□ 1.16
NXF1-216ENST00000533499 CACNA1FO60840 1977 aa22.29■■□□□ 1.16
NXF1-216ENST00000533499 BCAR3O75815 825 aa22.28■■□□□ 1.16
NXF1-216ENST00000533499 CAMTA2O94983 1202 aa22.28■■□□□ 1.16
NXF1-216ENST00000533499 ANKRD13DQ6ZTN6 518 aa22.28■■□□□ 1.16
NXF1-216ENST00000533499 FRAT1Q92837 279 aaPredicted RBP22.28■■□□□ 1.16
NXF1-216ENST00000533499 HLFQ16534 295 aa22.27■■□□□ 1.16
NXF1-216ENST00000533499 RCAN3Q9UKA8 241 aa22.27■■□□□ 1.16
NXF1-216ENST00000533499 ZNF652Q9Y2D9 606 aa22.27■■□□□ 1.16
NXF1-216ENST00000533499 GYS1P13807 737 aa22.26■■□□□ 1.15
NXF1-216ENST00000533499 FKBP8Q14318 412 aa22.26■■□□□ 1.15
NXF1-216ENST00000533499 PLBD2Q8NHP8 589 aa22.25■■□□□ 1.15
NXF1-216ENST00000533499 SLC16A10Q8TF71 515 aa22.25■■□□□ 1.15
NXF1-216ENST00000533499 NOB1Q9ULX3 412 aaKnown RBP22.25■■□□□ 1.15
NXF1-216ENST00000533499 PI4KAP2A4QPH2 592 aa22.24■■□□□ 1.15
NXF1-216ENST00000533499 GPTP24298 496 aa22.24■■□□□ 1.15
NXF1-216ENST00000533499 NLGN1Q8N2Q7 840 aa22.24■■□□□ 1.15
NXF1-216ENST00000533499 PI4KAP1Q8N8J0 262 aa22.24■■□□□ 1.15
NXF1-216ENST00000533499 BCL2L12Q9HB09 334 aa22.24■■□□□ 1.15
NXF1-216ENST00000533499 MAP3K2Q9Y2U5 619 aa22.24■■□□□ 1.15
NXF1-216ENST00000533499 CASZ1Q86V15 1759 aa22.24■■□□□ 1.15
NXF1-216ENST00000533499 FAM177BA6PVY3 158 aa22.23■■□□□ 1.15
NXF1-216ENST00000533499 ERVV-1B6SEH8 477 aa22.23■■□□□ 1.15
NXF1-216ENST00000533499 KSR2Q6VAB6 950 aa22.23■■□□□ 1.15
NXF1-216ENST00000533499 MTFR1LQ9H019 292 aa22.23■■□□□ 1.15
NXF1-216ENST00000533499 SCN7AQ01118 1682 aa22.23■■□□□ 1.15
NXF1-216ENST00000533499 F6X3S4 739 aa22.22■■□□□ 1.15
NXF1-216ENST00000533499 TBC1D9BQ66K14 1250 aa22.22■■□□□ 1.15
NXF1-216ENST00000533499 SLC4A10Q6U841 1118 aa22.22■■□□□ 1.15
NXF1-216ENST00000533499 MYD88Q99836 296 aa22.22■■□□□ 1.15
NXF1-216ENST00000533499 NIP7Q9Y221 180 aaKnown RBP eCLIP22.22■■□□□ 1.15
NXF1-216ENST00000533499 KIF16BQ96L93 1317 aa22.22■■□□□ 1.15
NXF1-216ENST00000533499 BCORQ6W2J9 1755 aa22.22■■□□□ 1.15
NXF1-216ENST00000533499 NUP98P52948 1817 aa22.22■■□□□ 1.15
NXF1-216ENST00000533499 ATP5J2-PTCD1G3V325 749 aa22.21■■□□□ 1.15
NXF1-216ENST00000533499 GIGYF2Q6Y7W6 1299 aaKnown RBP22.21■■□□□ 1.15
NXF1-216ENST00000533499 NPHP1O15259 732 aa22.2■■□□□ 1.14
NXF1-216ENST00000533499 MMP10P09238 476 aa22.2■■□□□ 1.14
NXF1-216ENST00000533499 POLD1P28340 1107 aa22.2■■□□□ 1.14
NXF1-216ENST00000533499 HSP90AB3PQ58FF7 597 aa22.2■■□□□ 1.14
NXF1-216ENST00000533499 CLEC4GQ6UXB4 293 aa22.2■■□□□ 1.14
NXF1-216ENST00000533499 DNAAF4Q8WXU2 420 aa22.2■■□□□ 1.14
NXF1-216ENST00000533499 SETDB2Q96T68 719 aa22.2■■□□□ 1.14
NXF1-216ENST00000533499 ARFGEF2Q9Y6D5 1785 aa22.2■■□□□ 1.14
NXF1-216ENST00000533499 IPO8O15397 1037 aaKnown RBP22.19■■□□□ 1.14
NXF1-216ENST00000533499 NEXNQ0ZGT2 675 aa22.19■■□□□ 1.14
NXF1-216ENST00000533499 NFIXQ14938 502 aa22.19■■□□□ 1.14
NXF1-216ENST00000533499 PARP3Q9Y6F1 533 aa22.19■■□□□ 1.14
NXF1-216ENST00000533499 PTPRCP08575 1304 aa22.19■■□□□ 1.14
NXF1-216ENST00000533499 ADCY9O60503 1353 aa22.19■■□□□ 1.14
NXF1-216ENST00000533499 TCIRG1Q13488 830 aa22.18■■□□□ 1.14
NXF1-216ENST00000533499 API5Q9BZZ5 524 aaKnown RBP22.18■■□□□ 1.14
NXF1-216ENST00000533499 SPON1Q9HCB6 807 aa22.18■■□□□ 1.14
NXF1-216ENST00000533499 ZKSCAN2Q63HK3 967 aa22.17■■□□□ 1.14
NXF1-216ENST00000533499 METTL22Q9BUU2 404 aaPredicted RBP22.17■■□□□ 1.14
NXF1-216ENST00000533499 KLHL34Q8N239 644 aa22.16■■□□□ 1.14
NXF1-216ENST00000533499 CLUAP1Q96AJ1 413 aa22.16■■□□□ 1.14
NXF1-216ENST00000533499 GTF2E1P29083 439 aaPredicted RBP22.15■■□□□ 1.14
NXF1-216ENST00000533499 BRPF1P55201 1214 aaPredicted RBP22.15■■□□□ 1.14
NXF1-216ENST00000533499 DDR1Q08345 913 aa22.15■■□□□ 1.14
NXF1-216ENST00000533499 NBPF5PQ86XG9 351 aaPredicted RBP22.15■■□□□ 1.14
NXF1-216ENST00000533499 PLIN1O60240 522 aa22.14■■□□□ 1.13
NXF1-216ENST00000533499 SERPINB2P05120 415 aa22.14■■□□□ 1.13
NXF1-216ENST00000533499 TM4SF1P30408 202 aa22.14■■□□□ 1.13
NXF1-216ENST00000533499 ZNF34Q8IZ26 560 aa22.14■■□□□ 1.13
NXF1-216ENST00000533499 TNNQ9UQP3 1299 aa22.14■■□□□ 1.13
NXF1-216ENST00000533499 ANKRD36CQ5JPF3 1778 aa22.14■■□□□ 1.13
NXF1-216ENST00000533499 RGL2O15211 777 aa22.13■■□□□ 1.13
NXF1-216ENST00000533499 CWF19L2Q2TBE0 894 aaKnown RBP22.13■■□□□ 1.13
NXF1-216ENST00000533499 ATF7IPQ6VMQ6 1270 aa22.13■■□□□ 1.13
NXF1-216ENST00000533499 FTSJ3Q8IY81 847 aaKnown RBP22.13■■□□□ 1.13
NXF1-216ENST00000533499 CCDC24Q8N4L8 307 aa22.13■■□□□ 1.13
NXF1-216ENST00000533499 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.13■■□□□ 1.13
NXF1-216ENST00000533499 PPP1R1BQ9UD71 204 aaPredicted RBP22.13■■□□□ 1.13
NXF1-216ENST00000533499 ATP10DQ9P241 1426 aa22.13■■□□□ 1.13
NXF1-216ENST00000533499 CARMIL3Q8ND23 1372 aa22.12■■□□□ 1.13
NXF1-216ENST00000533499 UBN2Q6ZU65 1347 aa22.12■■□□□ 1.13
NXF1-216ENST00000533499 POLRMTO00411 1230 aaKnown RBP22.12■■□□□ 1.13
NXF1-216ENST00000533499 PARP10Q53GL7 1025 aa22.12■■□□□ 1.13
NXF1-216ENST00000533499 RTL5Q5HYW3 569 aaPredicted RBP22.12■■□□□ 1.13
NXF1-216ENST00000533499 SUSD4Q5VX71 490 aa22.12■■□□□ 1.13
NXF1-216ENST00000533499 NLRP10Q86W26 655 aa22.12■■□□□ 1.13
NXF1-216ENST00000533499 ISCA1Q9BUE6 129 aa22.12■■□□□ 1.13
NXF1-216ENST00000533499 AFDNP55196 1824 aaKnown RBP22.12■■□□□ 1.13
NXF1-216ENST00000533499 TRIM27P14373 513 aa22.11■■□□□ 1.13
NXF1-216ENST00000533499 PPP1R42Q7Z4L9 355 aa22.11■■□□□ 1.13
NXF1-216ENST00000533499 ARHGAP45Q92619 1136 aa22.11■■□□□ 1.13
NXF1-216ENST00000533499 UTP14AQ9BVJ6 771 aaKnown RBP22.11■■□□□ 1.13
NXF1-216ENST00000533499 SRCIN1Q9C0H9 1055 aa22.11■■□□□ 1.13
NXF1-216ENST00000533499 CWC25Q9NXE8 425 aaPredicted RBP22.11■■□□□ 1.13
NXF1-216ENST00000533499 TRMT112Q9UI30 125 aaKnown RBP22.11■■□□□ 1.13
NXF1-216ENST00000533499 CENPBP07199 599 aaPredicted RBP22.1■■□□□ 1.13
NXF1-216ENST00000533499 NUTM1Q86Y26 1132 aa22.1■■□□□ 1.13
NXF1-216ENST00000533499 CNBD1Q8NA66 436 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms