RNA–Protein interactions for RNA: ENST00000533183.1

PKHD1L1-203, Transcript of PKHD1 like 1, humanhuman

TSL 3

Gene PKHD1L1, Length 807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-203ENST00000533183 USTQ9Y2C2 406 aa12.8□□□□□ -0.36
PKHD1L1-203ENST00000533183 PCDHGC4Q9Y5F7 938 aa12.8□□□□□ -0.36
PKHD1L1-203ENST00000533183 ATP2B4P23634 1241 aa12.79□□□□□ -0.36
PKHD1L1-203ENST00000533183 RTN1Q16799 776 aa12.79□□□□□ -0.36
PKHD1L1-203ENST00000533183 LRRC69Q6ZNQ3 347 aa12.79□□□□□ -0.36
PKHD1L1-203ENST00000533183 CNTNAP3BQ96NU0 1288 aa12.79□□□□□ -0.36
PKHD1L1-203ENST00000533183 CNTNAP3Q9BZ76 1288 aa12.79□□□□□ -0.36
PKHD1L1-203ENST00000533183 NEUROD4Q9HD90 331 aa12.79□□□□□ -0.36
PKHD1L1-203ENST00000533183 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.79□□□□□ -0.36
PKHD1L1-203ENST00000533183 PHF24Q9UPV7 400 aa12.79□□□□□ -0.36
PKHD1L1-203ENST00000533183 ATXN7O15265 892 aaPredicted RBP12.78□□□□□ -0.36
PKHD1L1-203ENST00000533183 BNIP3LO60238 219 aa12.78□□□□□ -0.36
PKHD1L1-203ENST00000533183 SAMD5Q5TGI4 173 aa12.78□□□□□ -0.36
PKHD1L1-203ENST00000533183 CARNS1A5YM72 827 aa12.77□□□□□ -0.37
PKHD1L1-203ENST00000533183 COL26A1Q96A83 441 aa12.77□□□□□ -0.37
PKHD1L1-203ENST00000533183 QTRT2Q9H974 415 aaKnown RBP12.77□□□□□ -0.37
PKHD1L1-203ENST00000533183 ANKIB1Q9P2G1 1089 aa12.77□□□□□ -0.37
PKHD1L1-203ENST00000533183 ATXN7L1Q9ULK2 861 aaPredicted RBP12.77□□□□□ -0.37
PKHD1L1-203ENST00000533183 ABHD17AQ96GS6 310 aa12.76□□□□□ -0.37
PKHD1L1-203ENST00000533183 MYO19Q96H55 970 aa12.76□□□□□ -0.37
PKHD1L1-203ENST00000533183 SUSD3Q96L08 255 aa12.76□□□□□ -0.37
PKHD1L1-203ENST00000533183 FAM157BP0CG42 384 aa12.75□□□□□ -0.37
PKHD1L1-203ENST00000533183 HIF1AQ16665 826 aa12.75□□□□□ -0.37
PKHD1L1-203ENST00000533183 RETREG2Q8NC44 543 aa12.75□□□□□ -0.37
PKHD1L1-203ENST00000533183 HSH2DQ96JZ2 352 aa12.75□□□□□ -0.37
PKHD1L1-203ENST00000533183 MBIPQ9NS73 344 aa12.75□□□□□ -0.37
PKHD1L1-203ENST00000533183 TNP2Q05952 138 aa12.74□□□□□ -0.37
PKHD1L1-203ENST00000533183 ZNF280CQ8ND82 737 aa12.74□□□□□ -0.37
PKHD1L1-203ENST00000533183 MKNK1Q9BUB5 465 aa12.74□□□□□ -0.37
PKHD1L1-203ENST00000533183 PTCD1O75127 700 aaKnown RBP12.73□□□□□ -0.37
PKHD1L1-203ENST00000533183 SSFA2P28290 1259 aa12.73□□□□□ -0.37
PKHD1L1-203ENST00000533183 CAPN12Q6ZSI9 719 aa12.73□□□□□ -0.37
PKHD1L1-203ENST00000533183 DCDC2BA2VCK2 349 aa12.72□□□□□ -0.37
PKHD1L1-203ENST00000533183 MAPTP10636 758 aaKnown RBP12.72□□□□□ -0.37
PKHD1L1-203ENST00000533183 MX2P20592 715 aa12.72□□□□□ -0.37
PKHD1L1-203ENST00000533183 KHNYNO15037 678 aaKnown RBP12.71□□□□□ -0.37
PKHD1L1-203ENST00000533183 FGFR3P22607 806 aa12.71□□□□□ -0.37
PKHD1L1-203ENST00000533183 SRSF11Q05519 484 aaKnown RBP12.71□□□□□ -0.37
PKHD1L1-203ENST00000533183 KLK14Q9P0G3 267 aa12.71□□□□□ -0.37
PKHD1L1-203ENST00000533183 HCN2Q9UL51 889 aa12.71□□□□□ -0.37
PKHD1L1-203ENST00000533183 LRFN2Q9ULH4 789 aa12.71□□□□□ -0.37
PKHD1L1-203ENST00000533183 EFSO43281 561 aa12.7□□□□□ -0.38
PKHD1L1-203ENST00000533183 DGKZQ13574 1117 aa12.7□□□□□ -0.38
PKHD1L1-203ENST00000533183 C11orf91Q3C1V1 193 aa12.7□□□□□ -0.38
PKHD1L1-203ENST00000533183 COX20Q5RI15 118 aa12.7□□□□□ -0.38
PKHD1L1-203ENST00000533183 IER5Q5VY09 327 aa12.7□□□□□ -0.38
PKHD1L1-203ENST00000533183 BCS1LQ9Y276 419 aa12.7□□□□□ -0.38
PKHD1L1-203ENST00000533183 TGFBR3LH3BV60 316 aa12.69□□□□□ -0.38
PKHD1L1-203ENST00000533183 C16orf46Q6P387 395 aa12.69□□□□□ -0.38
PKHD1L1-203ENST00000533183 SAP130Q9H0E3 1048 aa12.69□□□□□ -0.38
PKHD1L1-203ENST00000533183 IGF1RP08069 1367 aa12.69□□□□□ -0.38
PKHD1L1-203ENST00000533183 ADAMTS2O95450 1211 aa12.68□□□□□ -0.38
PKHD1L1-203ENST00000533183 SLURP2P0DP57 97 aa12.68□□□□□ -0.38
PKHD1L1-203ENST00000533183 INSM1Q01101 510 aaPredicted RBP12.68□□□□□ -0.38
PKHD1L1-203ENST00000533183 CTBSQ01459 385 aa12.68□□□□□ -0.38
PKHD1L1-203ENST00000533183 PDE4CQ08493 712 aa12.68□□□□□ -0.38
PKHD1L1-203ENST00000533183 LAMC2Q13753 1193 aa12.68□□□□□ -0.38
PKHD1L1-203ENST00000533183 NAA30Q147X3 362 aaPredicted RBP12.68□□□□□ -0.38
PKHD1L1-203ENST00000533183 PHLDB3Q6NSJ2 640 aa12.68□□□□□ -0.38
PKHD1L1-203ENST00000533183 CEP63Q96MT8 703 aa12.68□□□□□ -0.38
PKHD1L1-203ENST00000533183 NSFL1CQ9UNZ2 370 aaKnown RBP12.68□□□□□ -0.38
PKHD1L1-203ENST00000533183 TYRO3Q06418 890 aa12.67□□□□□ -0.38
PKHD1L1-203ENST00000533183 BTLAQ7Z6A9 289 aa12.67□□□□□ -0.38
PKHD1L1-203ENST00000533183 DMGDHQ9UI17 866 aaKnown RBP12.67□□□□□ -0.38
PKHD1L1-203ENST00000533183 LORP23490 312 aaPredicted RBP12.66□□□□□ -0.38
PKHD1L1-203ENST00000533183 FAM182BQ5T319 152 aa12.66□□□□□ -0.38
PKHD1L1-203ENST00000533183 STRN4Q9NRL3 753 aa12.66□□□□□ -0.38
PKHD1L1-203ENST00000533183 MARK1Q9P0L2 795 aa12.66□□□□□ -0.38
PKHD1L1-203ENST00000533183 SEPT3Q9UH03 358 aa12.66□□□□□ -0.38
PKHD1L1-203ENST00000533183 C2CD2LO14523 706 aa12.65□□□□□ -0.38
PKHD1L1-203ENST00000533183 CD33P20138 364 aa12.65□□□□□ -0.38
PKHD1L1-203ENST00000533183 SCNN1AP37088 669 aa12.65□□□□□ -0.38
PKHD1L1-203ENST00000533183 MAP2K3P46734 347 aa12.65□□□□□ -0.38
PKHD1L1-203ENST00000533183 BRD7Q9NPI1 651 aa12.65□□□□□ -0.38
PKHD1L1-203ENST00000533183 BMP4P12644 408 aa12.64□□□□□ -0.39
PKHD1L1-203ENST00000533183 SFSWAPQ12872 951 aaKnown RBP12.64□□□□□ -0.39
PKHD1L1-203ENST00000533183 B4GALNT3Q6L9W6 998 aa12.64□□□□□ -0.39
PKHD1L1-203ENST00000533183 IFT43Q96FT9 208 aa12.64□□□□□ -0.39
PKHD1L1-203ENST00000533183 KCNQ4P56696 695 aa12.63□□□□□ -0.39
PKHD1L1-203ENST00000533183 ZSCAN1Q8NBB4 408 aa12.63□□□□□ -0.39
PKHD1L1-203ENST00000533183 TNFRSF10BO14763 440 aa12.62□□□□□ -0.39
PKHD1L1-203ENST00000533183 MICAL2O94851 1124 aa12.61□□□□□ -0.39
PKHD1L1-203ENST00000533183 BRD2P25440 801 aaKnown RBP12.61□□□□□ -0.39
PKHD1L1-203ENST00000533183 IDH3AP50213 366 aa12.61□□□□□ -0.39
PKHD1L1-203ENST00000533183 KCNH4Q9UQ05 1017 aa12.61□□□□□ -0.39
PKHD1L1-203ENST00000533183 INPP5BP32019 993 aa12.6□□□□□ -0.39
PKHD1L1-203ENST00000533183 TREML1Q86YW5 311 aa12.59□□□□□ -0.39
PKHD1L1-203ENST00000533183 ETFBKMTQ8IXQ9 262 aa12.59□□□□□ -0.39
PKHD1L1-203ENST00000533183 WHAMMQ8TF30 809 aa12.59□□□□□ -0.39
PKHD1L1-203ENST00000533183 ACDQ96AP0 544 aa12.59□□□□□ -0.39
PKHD1L1-203ENST00000533183 GRIN2CQ14957 1233 aa12.58□□□□□ -0.4
PKHD1L1-203ENST00000533183 ZNF385CQ66K41 422 aaPredicted RBP12.58□□□□□ -0.4
PKHD1L1-203ENST00000533183 LYPD4Q6UWN0 246 aa12.58□□□□□ -0.4
PKHD1L1-203ENST00000533183 OXCT2Q9BYC2 517 aaPredicted RBP12.58□□□□□ -0.4
PKHD1L1-203ENST00000533183 STIM2Q9P246 746 aa12.58□□□□□ -0.4
PKHD1L1-203ENST00000533183 MTMR7Q9Y216 660 aa12.58□□□□□ -0.4
PKHD1L1-203ENST00000533183 ARSDP51689 593 aa12.57□□□□□ -0.4
PKHD1L1-203ENST00000533183 FAM26DQ5JW98 314 aa12.57□□□□□ -0.4
PKHD1L1-203ENST00000533183 HELQQ8TDG4 1101 aa12.57□□□□□ -0.4
PKHD1L1-203ENST00000533183 GTF3C2Q8WUA4 911 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms