RNA–Protein interactions for RNA: ENST00000533183.1

PKHD1L1-203, Transcript of PKHD1 like 1, humanhuman

TSL 3

Gene PKHD1L1, Length 807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-203ENST00000533183 AEBP2Q6ZN18 517 aaPredicted RBP36.73■■■■□ 3.47
PKHD1L1-203ENST00000533183 CHIC1Q5VXU3 224 aa35.88■■■■□ 3.33
PKHD1L1-203ENST00000533183 PHF23Q9BUL5 403 aaPredicted RBP31.55■■■□□ 2.64
PKHD1L1-203ENST00000533183 SENP3Q9H4L4 574 aaPredicted RBP31.17■■■□□ 2.58
PKHD1L1-203ENST00000533183 PLPPR3Q6T4P5 718 aa29.12■■■□□ 2.25
PKHD1L1-203ENST00000533183 FOXD1Q16676 465 aa28.93■■■□□ 2.22
PKHD1L1-203ENST00000533183 PPP6R1Q9UPN7 881 aa27.84■■■□□ 2.05
PKHD1L1-203ENST00000533183 ADRA2BP18089 450 aa27.8■■■□□ 2.04
PKHD1L1-203ENST00000533183 PIAS4Q8N2W9 510 aaPredicted RBP27.26■■□□□ 1.95
PKHD1L1-203ENST00000533183 MSH5O43196 834 aa26.69■■□□□ 1.86
PKHD1L1-203ENST00000533183 PPP4R3CPQ6ZMV5 832 aa25.66■■□□□ 1.7
PKHD1L1-203ENST00000533183 SCAF1Q9H7N4 1312 aaKnown RBP25.44■■□□□ 1.66
PKHD1L1-203ENST00000533183 MAPK8IP2Q13387 824 aaPredicted RBP25.23■■□□□ 1.63
PKHD1L1-203ENST00000533183 KCNA4P22459 653 aa25.05■■□□□ 1.6
PKHD1L1-203ENST00000533183 NCBP3Q53F19 620 aaKnown RBP24.98■■□□□ 1.59
PKHD1L1-203ENST00000533183 CNKSR2Q8WXI2 1034 aa24.95■■□□□ 1.58
PKHD1L1-203ENST00000533183 DMRT2Q9Y5R5 561 aa24.89■■□□□ 1.58
PKHD1L1-203ENST00000533183 NPM3O75607 178 aaKnown RBP24.62■■□□□ 1.53
PKHD1L1-203ENST00000533183 RNF216Q9NWF9 866 aaPredicted RBP24.46■■□□□ 1.51
PKHD1L1-203ENST00000533183 HOXD11P31277 338 aaPredicted RBP24.38■■□□□ 1.49
PKHD1L1-203ENST00000533183 POTEDQ86YR6 584 aa24.31■■□□□ 1.48
PKHD1L1-203ENST00000533183 DNAJC5BQ9UF47 199 aa23.95■■□□□ 1.42
PKHD1L1-203ENST00000533183 SLC4A1APQ9BWU0 796 aaKnown RBP23.85■■□□□ 1.41
PKHD1L1-203ENST00000533183 DCAF8L1A6NGE4 600 aa23.77■■□□□ 1.4
PKHD1L1-203ENST00000533183 SLC4A2P04920 1241 aa23.26■■□□□ 1.31
PKHD1L1-203ENST00000533183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.21■■□□□ 1.31
PKHD1L1-203ENST00000533183 EHMT2Q96KQ7 1210 aa23.14■■□□□ 1.29
PKHD1L1-203ENST00000533183 FOXD4L1Q9NU39 408 aa23.07■■□□□ 1.28
PKHD1L1-203ENST00000533183 ZBTB22O15209 634 aa23.05■■□□□ 1.28
PKHD1L1-203ENST00000533183 CSRNP3Q8WYN3 585 aa22.92■■□□□ 1.26
PKHD1L1-203ENST00000533183 RNF39Q9H2S5 420 aa22.87■■□□□ 1.25
PKHD1L1-203ENST00000533183 U3KPZ7 1027 aaPredicted RBP22.84■■□□□ 1.25
PKHD1L1-203ENST00000533183 MYCNP04198 464 aaPredicted RBP22.75■■□□□ 1.23
PKHD1L1-203ENST00000533183 C1QBPQ07021 282 aaKnown RBP22.6■■□□□ 1.21
PKHD1L1-203ENST00000533183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.55■■□□□ 1.2
PKHD1L1-203ENST00000533183 HNRNPUL2Q1KMD3 747 aaKnown RBP22.55■■□□□ 1.2
PKHD1L1-203ENST00000533183 SAMD1Q6SPF0 538 aaPredicted RBP22.47■■□□□ 1.19
PKHD1L1-203ENST00000533183 APLP2Q06481 763 aa22.32■■□□□ 1.16
PKHD1L1-203ENST00000533183 ATXN8OSP0DMR3 200 aa22.28■■□□□ 1.16
PKHD1L1-203ENST00000533183 CACNB1Q02641 598 aaPredicted RBP22.26■■□□□ 1.15
PKHD1L1-203ENST00000533183 SPINK5Q9NQ38 1064 aaPredicted RBP22.2■■□□□ 1.14
PKHD1L1-203ENST00000533183 ATF5Q9Y2D1 282 aaPredicted RBP22.14■■□□□ 1.13
PKHD1L1-203ENST00000533183 CAPN15O75808 1086 aa22.1■■□□□ 1.13
PKHD1L1-203ENST00000533183 ZNF219Q9P2Y4 722 aaPredicted RBP22.01■■□□□ 1.11
PKHD1L1-203ENST00000533183 TRHP20396 242 aaPredicted RBP21.99■■□□□ 1.11
PKHD1L1-203ENST00000533183 DSG3P32926 999 aa21.75■■□□□ 1.07
PKHD1L1-203ENST00000533183 ABCB7O75027 752 aa21.68■■□□□ 1.06
PKHD1L1-203ENST00000533183 POLA2Q14181 598 aa21.65■■□□□ 1.06
PKHD1L1-203ENST00000533183 ZBTB12Q9Y330 459 aaPredicted RBP21.3■■□□□ 1
PKHD1L1-203ENST00000533183 FBLN2P98095 1184 aa21.21■□□□□ 0.99
PKHD1L1-203ENST00000533183 MKRN4PQ13434 485 aaPredicted RBP21.19■□□□□ 0.98
PKHD1L1-203ENST00000533183 OSCARQ8IYS5 282 aa20.9■□□□□ 0.94
PKHD1L1-203ENST00000533183 SPDYE2BA6NHP3 402 aa20.73■□□□□ 0.91
PKHD1L1-203ENST00000533183 SPDYE6P0CI01 402 aa20.73■□□□□ 0.91
PKHD1L1-203ENST00000533183 SPDYE2Q495Y8 402 aa20.73■□□□□ 0.91
PKHD1L1-203ENST00000533183 RBM42Q9BTD8 480 aaKnown RBP20.73■□□□□ 0.91
PKHD1L1-203ENST00000533183 SPDYE4A6NLX3 237 aa20.7■□□□□ 0.9
PKHD1L1-203ENST00000533183 FKBP8Q14318 412 aa20.7■□□□□ 0.9
PKHD1L1-203ENST00000533183 ZNF692Q9BU19 519 aaPredicted RBP20.63■□□□□ 0.89
PKHD1L1-203ENST00000533183 SSUH2Q9Y2M2 353 aa20.58■□□□□ 0.89
PKHD1L1-203ENST00000533183 AKT1S1Q96B36 256 aa20.48■□□□□ 0.87
PKHD1L1-203ENST00000533183 PROM2Q8N271 834 aa20.38■□□□□ 0.85
PKHD1L1-203ENST00000533183 PABPN1Q86U42 306 aaKnown RBP eCLIP20.36■□□□□ 0.85
PKHD1L1-203ENST00000533183 REM2Q8IYK8 340 aaPredicted RBP20.27■□□□□ 0.84
PKHD1L1-203ENST00000533183 SPDYE1Q8NFV5 336 aaPredicted RBP20.12■□□□□ 0.81
PKHD1L1-203ENST00000533183 PITPNM1O00562 1244 aa20.04■□□□□ 0.8
PKHD1L1-203ENST00000533183 STAG3Q9UJ98 1225 aa20.04■□□□□ 0.8
PKHD1L1-203ENST00000533183 CLEC11AQ9Y240 323 aa20.01■□□□□ 0.79
PKHD1L1-203ENST00000533183 FBXO3Q9UK99 471 aa19.98■□□□□ 0.79
PKHD1L1-203ENST00000533183 CHRDL2Q6WN34 429 aa19.86■□□□□ 0.77
PKHD1L1-203ENST00000533183 PRR29P0C7W0 189 aa19.83■□□□□ 0.77
PKHD1L1-203ENST00000533183 VASPP50552 380 aaPredicted RBP19.71■□□□□ 0.75
PKHD1L1-203ENST00000533183 FXR2P51116 673 aaKnown RBP eCLIP19.68■□□□□ 0.74
PKHD1L1-203ENST00000533183 MIER1Q8N108 512 aa19.63■□□□□ 0.73
PKHD1L1-203ENST00000533183 PIP4P2Q8N4L2 257 aa19.62■□□□□ 0.73
PKHD1L1-203ENST00000533183 PLCD3Q8N3E9 789 aa19.59■□□□□ 0.73
PKHD1L1-203ENST00000533183 CREBZFQ9NS37 354 aa19.59■□□□□ 0.73
PKHD1L1-203ENST00000533183 PRKAR2AP13861 404 aaKnown RBP19.53■□□□□ 0.72
PKHD1L1-203ENST00000533183 CHADLQ6NUI6 762 aa19.53■□□□□ 0.72
PKHD1L1-203ENST00000533183 PLEKHG5O94827 1062 aa19.52■□□□□ 0.72
PKHD1L1-203ENST00000533183 IFNLR1Q8IU57 520 aaPredicted RBP19.44■□□□□ 0.7
PKHD1L1-203ENST00000533183 MNX1P50219 401 aaPredicted RBP19.4■□□□□ 0.7
PKHD1L1-203ENST00000533183 ZBTB47Q9UFB7 747 aaPredicted RBP19.39■□□□□ 0.69
PKHD1L1-203ENST00000533183 KLHL34Q8N239 644 aa19.36■□□□□ 0.69
PKHD1L1-203ENST00000533183 FARP1Q9Y4F1 1045 aaPredicted RBP19.36■□□□□ 0.69
PKHD1L1-203ENST00000533183 NPM1P06748 294 aaKnown RBP eCLIP19.26■□□□□ 0.67
PKHD1L1-203ENST00000533183 POTEHQ6S545 545 aa19.25■□□□□ 0.67
PKHD1L1-203ENST00000533183 SPOCK2Q92563 424 aa19.21■□□□□ 0.67
PKHD1L1-203ENST00000533183 NUBP1P53384 320 aa19.14■□□□□ 0.65
PKHD1L1-203ENST00000533183 RASEFQ8IZ41 740 aa19.05■□□□□ 0.64
PKHD1L1-203ENST00000533183 C19orf67A6NJJ6 358 aa19.01■□□□□ 0.63
PKHD1L1-203ENST00000533183 HAX1O00165 279 aa18.97■□□□□ 0.63
PKHD1L1-203ENST00000533183 CD44P16070 742 aaKnown RBP18.97■□□□□ 0.63
PKHD1L1-203ENST00000533183 FAM212AQ96EL1 285 aa18.97■□□□□ 0.63
PKHD1L1-203ENST00000533183 TSPYL2Q9H2G4 693 aaPredicted RBP18.94■□□□□ 0.62
PKHD1L1-203ENST00000533183 PAK3O75914 559 aaPredicted RBP18.93■□□□□ 0.62
PKHD1L1-203ENST00000533183 DCAF8Q5TAQ9 597 aa18.93■□□□□ 0.62
PKHD1L1-203ENST00000533183 GSE1Q14687 1217 aa18.92■□□□□ 0.62
PKHD1L1-203ENST00000533183 CIZ1Q9ULV3 898 aaPredicted RBP18.9■□□□□ 0.62
PKHD1L1-203ENST00000533183 ZRANB1Q9UGI0 708 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms