RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 EIF2S2P20042 333 aaKnown RBP39.57■■■■□ 3.93
SSSCA1-207ENST00000533115 HLFQ16534 295 aa39.57■■■■□ 3.93
SSSCA1-207ENST00000533115 CCDC24Q8N4L8 307 aa39.57■■■■□ 3.93
SSSCA1-207ENST00000533115 NPHP1O15259 732 aa39.56■■■■□ 3.92
SSSCA1-207ENST00000533115 ANKRD31Q8N7Z5 1873 aa39.56■■■■□ 3.92
SSSCA1-207ENST00000533115 DLEC1Q9Y238 1755 aa39.55■■■■□ 3.92
SSSCA1-207ENST00000533115 PDE6BP35913 854 aa39.55■■■■□ 3.92
SSSCA1-207ENST00000533115 NIP7Q9Y221 180 aaKnown RBP eCLIP39.55■■■■□ 3.92
SSSCA1-207ENST00000533115 ERVV-1B6SEH8 477 aa39.54■■■■□ 3.92
SSSCA1-207ENST00000533115 ST5P78524 1137 aa39.54■■■■□ 3.92
SSSCA1-207ENST00000533115 KIF6Q6ZMV9 814 aa39.54■■■■□ 3.92
SSSCA1-207ENST00000533115 TTLL7Q6ZT98 887 aa39.54■■■■□ 3.92
SSSCA1-207ENST00000533115 NBPF5PQ86XG9 351 aaPredicted RBP39.54■■■■□ 3.92
SSSCA1-207ENST00000533115 CFAP44Q96MT7 982 aa39.54■■■■□ 3.92
SSSCA1-207ENST00000533115 PDZRN3Q9UPQ7 1066 aa39.54■■■■□ 3.92
SSSCA1-207ENST00000533115 ADCY9O60503 1353 aa39.54■■■■□ 3.92
SSSCA1-207ENST00000533115 MAP3K15Q6ZN16 1313 aa39.53■■■■□ 3.92
SSSCA1-207ENST00000533115 ATP10DQ9P241 1426 aa39.51■■■■□ 3.92
SSSCA1-207ENST00000533115 PDIA6Q15084 440 aa39.51■■■■□ 3.92
SSSCA1-207ENST00000533115 MRS2Q9HD23 443 aa39.51■■■■□ 3.92
SSSCA1-207ENST00000533115 KRT24Q2M2I5 525 aa39.5■■■■□ 3.91
SSSCA1-207ENST00000533115 TTLL6Q8N841 843 aa39.5■■■■□ 3.91
SSSCA1-207ENST00000533115 LRP10Q7Z4F1 713 aa39.48■■■■□ 3.91
SSSCA1-207ENST00000533115 CALD1Q05682 793 aaKnown RBP39.47■■■■□ 3.91
SSSCA1-207ENST00000533115 TPTE2Q6XPS3 522 aa39.47■■■■□ 3.91
SSSCA1-207ENST00000533115 ZBTB3Q9H5J0 574 aa39.47■■■■□ 3.91
SSSCA1-207ENST00000533115 NUP98P52948 1817 aa39.47■■■■□ 3.91
SSSCA1-207ENST00000533115 ZNF853P0CG23 659 aa39.46■■■■□ 3.91
SSSCA1-207ENST00000533115 NECTIN2Q92692 538 aa39.46■■■■□ 3.91
SSSCA1-207ENST00000533115 PROSER3Q2NL68 480 aa39.45■■■■□ 3.91
SSSCA1-207ENST00000533115 ZNF622Q969S3 477 aaKnown RBP eCLIP39.45■■■■□ 3.91
SSSCA1-207ENST00000533115 MBIPQ9NS73 344 aa39.45■■■■□ 3.91
SSSCA1-207ENST00000533115 ANXA1P04083 346 aa39.44■■■■□ 3.9
SSSCA1-207ENST00000533115 COL11A2P13942 1736 aaPredicted RBP39.44■■■■□ 3.9
SSSCA1-207ENST00000533115 IFT57Q9NWB7 429 aa39.44■■■■□ 3.9
SSSCA1-207ENST00000533115 FAM177BA6PVY3 158 aa39.43■■■■□ 3.9
SSSCA1-207ENST00000533115 HOXB7P09629 217 aa39.43■■■■□ 3.9
SSSCA1-207ENST00000533115 GNAI1P63096 354 aa39.42■■■■□ 3.9
SSSCA1-207ENST00000533115 GIGYF2Q6Y7W6 1299 aaKnown RBP39.4■■■■□ 3.9
SSSCA1-207ENST00000533115 DDX21Q9NR30 783 aaKnown RBP eCLIP39.4■■■■□ 3.9
SSSCA1-207ENST00000533115 SRGNP10124 158 aa39.39■■■■□ 3.9
SSSCA1-207ENST00000533115 HDGFL1Q5TGJ6 251 aa39.38■■■■□ 3.89
SSSCA1-207ENST00000533115 STYK1Q6J9G0 422 aa39.38■■■■□ 3.89
SSSCA1-207ENST00000533115 NYXQ9GZU5 481 aa39.38■■■■□ 3.89
SSSCA1-207ENST00000533115 GTF2E1P29083 439 aaPredicted RBP39.37■■■■□ 3.89
SSSCA1-207ENST00000533115 C9orf131Q5VYM1 1079 aa39.37■■■■□ 3.89
SSSCA1-207ENST00000533115 DUSP27Q5VZP5 1158 aa39.37■■■■□ 3.89
SSSCA1-207ENST00000533115 MASTLQ96GX5 879 aa39.37■■■■□ 3.89
SSSCA1-207ENST00000533115 GPBP1L1Q9HC44 474 aaPredicted RBP39.37■■■■□ 3.89
SSSCA1-207ENST00000533115 GPTP24298 496 aa39.36■■■■□ 3.89
SSSCA1-207ENST00000533115 COPS6Q7L5N1 327 aa39.36■■■■□ 3.89
SSSCA1-207ENST00000533115 ZNF34Q8IZ26 560 aa39.36■■■■□ 3.89
SSSCA1-207ENST00000533115 ZNF526Q8TF50 670 aaPredicted RBP39.36■■■■□ 3.89
SSSCA1-207ENST00000533115 CNKSR1Q969H4 720 aa39.36■■■■□ 3.89
SSSCA1-207ENST00000533115 KLRG2A4D1S0 409 aaPredicted RBP39.35■■■■□ 3.89
SSSCA1-207ENST00000533115 XAGE3Q8WTP9 111 aa39.35■■■■□ 3.89
SSSCA1-207ENST00000533115 CHPF2Q9P2E5 772 aa39.35■■■■□ 3.89
SSSCA1-207ENST00000533115 UBN2Q6ZU65 1347 aa39.35■■■■□ 3.89
SSSCA1-207ENST00000533115 AIMP1Q12904 312 aaKnown RBP39.34■■■■□ 3.89
SSSCA1-207ENST00000533115 CCDC27Q2M243 656 aa39.34■■■■□ 3.89
SSSCA1-207ENST00000533115 SENP3-EIF4A1A0A087X0R7 540 aa39.32■■■■□ 3.89
SSSCA1-207ENST00000533115 IBTKQ9P2D0 1353 aaPredicted RBP39.32■■■■□ 3.88
SSSCA1-207ENST00000533115 RASSF7Q02833 373 aa39.31■■■■□ 3.88
SSSCA1-207ENST00000533115 SUSD4Q5VX71 490 aa39.31■■■■□ 3.88
SSSCA1-207ENST00000533115 NUTM1Q86Y26 1132 aa39.31■■■■□ 3.88
SSSCA1-207ENST00000533115 RNF181Q9P0P0 153 aa39.31■■■■□ 3.88
SSSCA1-207ENST00000533115 DBF4Q9UBU7 674 aaPredicted RBP39.31■■■■□ 3.88
SSSCA1-207ENST00000533115 C21orf2O43822 256 aa39.3■■■■□ 3.88
SSSCA1-207ENST00000533115 NPR1P16066 1061 aa39.3■■■■□ 3.88
SSSCA1-207ENST00000533115 SBF1O95248 1867 aa39.3■■■■□ 3.88
SSSCA1-207ENST00000533115 WWC1Q8IX03 1113 aa39.29■■■■□ 3.88
SSSCA1-207ENST00000533115 ZNF219Q9P2Y4 722 aaPredicted RBP39.29■■■■□ 3.88
SSSCA1-207ENST00000533115 ERFEQ4G0M1 354 aa39.28■■■■□ 3.88
SSSCA1-207ENST00000533115 NCBP3Q53F19 620 aaKnown RBP39.28■■■■□ 3.88
SSSCA1-207ENST00000533115 PARP10Q53GL7 1025 aa39.28■■■■□ 3.88
SSSCA1-207ENST00000533115 PRPF40BQ6NWY9 871 aaKnown RBP39.28■■■■□ 3.88
SSSCA1-207ENST00000533115 ABCC12Q96J65 1359 aa39.28■■■■□ 3.88
SSSCA1-207ENST00000533115 SLX4Q8IY92 1834 aa39.27■■■■□ 3.88
SSSCA1-207ENST00000533115 C1QTNF8P60827 252 aa39.26■■■■□ 3.88
SSSCA1-207ENST00000533115 PPP1R42Q7Z4L9 355 aa39.26■■■■□ 3.88
SSSCA1-207ENST00000533115 ARFGEF2Q9Y6D5 1785 aa39.26■■■■□ 3.87
SSSCA1-207ENST00000533115 NFKBIEO00221 500 aa39.25■■■■□ 3.87
SSSCA1-207ENST00000533115 ELL2O00472 640 aaPredicted RBP39.25■■■■□ 3.87
SSSCA1-207ENST00000533115 NTSR2O95665 410 aa39.25■■■■□ 3.87
SSSCA1-207ENST00000533115 HSP90AB3PQ58FF7 597 aa39.25■■■■□ 3.87
SSSCA1-207ENST00000533115 CACNA1SQ13698 1873 aa39.25■■■■□ 3.87
SSSCA1-207ENST00000533115 LMNB1P20700 586 aa39.24■■■■□ 3.87
SSSCA1-207ENST00000533115 C8orf58Q8NAV2 365 aa39.24■■■■□ 3.87
SSSCA1-207ENST00000533115 HYPKQ9NX55 129 aa39.24■■■■□ 3.87
SSSCA1-207ENST00000533115 TNRC6CQ9HCJ0 1690 aaKnown RBP39.24■■■■□ 3.87
SSSCA1-207ENST00000533115 RIC1Q4ADV7 1423 aa39.23■■■■□ 3.87
SSSCA1-207ENST00000533115 PRELPP51888 382 aa39.22■■■■□ 3.87
SSSCA1-207ENST00000533115 ANKRD36CQ5JPF3 1778 aa39.21■■■■□ 3.87
SSSCA1-207ENST00000533115 TCIRG1Q13488 830 aa39.21■■■■□ 3.87
SSSCA1-207ENST00000533115 CRY2Q49AN0 593 aa39.21■■■■□ 3.87
SSSCA1-207ENST00000533115 SOGA3Q5TF21 947 aa39.2■■■■□ 3.87
SSSCA1-207ENST00000533115 PLBD2Q8NHP8 589 aa39.2■■■■□ 3.87
SSSCA1-207ENST00000533115 UTP14AQ9BVJ6 771 aaKnown RBP39.2■■■■□ 3.87
SSSCA1-207ENST00000533115 ANKRD13DQ6ZTN6 518 aa39.19■■■■□ 3.86
SSSCA1-207ENST00000533115 FAM9BQ8IZU0 186 aa39.19■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms