RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 C9orf131Q5VYM1 1079 aa20.79■□□□□ 0.92
LDLRAD3-205ENST00000532490 CNBD1Q8NA66 436 aa20.79■□□□□ 0.92
LDLRAD3-205ENST00000532490 TRIM35Q9UPQ4 493 aa20.79■□□□□ 0.92
LDLRAD3-205ENST00000532490 ZNF652Q9Y2D9 606 aa20.79■□□□□ 0.92
LDLRAD3-205ENST00000532490 COL11A2P13942 1736 aaPredicted RBP20.78■□□□□ 0.92
LDLRAD3-205ENST00000532490 ERVV-1B6SEH8 477 aa20.76■□□□□ 0.91
LDLRAD3-205ENST00000532490 NEUROD2Q15784 382 aa20.76■□□□□ 0.91
LDLRAD3-205ENST00000532490 NIP7Q9Y221 180 aaKnown RBP eCLIP20.76■□□□□ 0.91
LDLRAD3-205ENST00000532490 ERBB4Q15303 1308 aa20.76■□□□□ 0.91
LDLRAD3-205ENST00000532490 CHL1O00533 1208 aa20.75■□□□□ 0.91
LDLRAD3-205ENST00000532490 KIF3CO14782 793 aa20.75■□□□□ 0.91
LDLRAD3-205ENST00000532490 PRELPP51888 382 aa20.75■□□□□ 0.91
LDLRAD3-205ENST00000532490 ST5P78524 1137 aa20.75■□□□□ 0.91
LDLRAD3-205ENST00000532490 TTLL7Q6ZT98 887 aa20.75■□□□□ 0.91
LDLRAD3-205ENST00000532490 LRP10Q7Z4F1 713 aa20.75■□□□□ 0.91
LDLRAD3-205ENST00000532490 NBPF5PQ86XG9 351 aaPredicted RBP20.75■□□□□ 0.91
LDLRAD3-205ENST00000532490 NGEFQ8N5V2 710 aa20.75■□□□□ 0.91
LDLRAD3-205ENST00000532490 NUP98P52948 1817 aa20.74■□□□□ 0.91
LDLRAD3-205ENST00000532490 KLRG2A4D1S0 409 aaPredicted RBP20.74■□□□□ 0.91
LDLRAD3-205ENST00000532490 SRGNP10124 158 aa20.74■□□□□ 0.91
LDLRAD3-205ENST00000532490 MYL6BP14649 208 aa20.74■□□□□ 0.91
LDLRAD3-205ENST00000532490 RASSF7Q02833 373 aa20.74■□□□□ 0.91
LDLRAD3-205ENST00000532490 PDIA6Q15084 440 aa20.74■□□□□ 0.91
LDLRAD3-205ENST00000532490 ZNF622Q969S3 477 aaKnown RBP eCLIP20.74■□□□□ 0.91
LDLRAD3-205ENST00000532490 MAP3K15Q6ZN16 1313 aa20.74■□□□□ 0.91
LDLRAD3-205ENST00000532490 TPTE2Q6XPS3 522 aa20.73■□□□□ 0.91
LDLRAD3-205ENST00000532490 RNF181Q9P0P0 153 aa20.73■□□□□ 0.91
LDLRAD3-205ENST00000532490 NPHP1O15259 732 aa20.72■□□□□ 0.91
LDLRAD3-205ENST00000532490 STYK1Q6J9G0 422 aa20.72■□□□□ 0.91
LDLRAD3-205ENST00000532490 NFKBIEO00221 500 aa20.71■□□□□ 0.91
LDLRAD3-205ENST00000532490 MASTLQ96GX5 879 aa20.71■□□□□ 0.91
LDLRAD3-205ENST00000532490 SLX4Q8IY92 1834 aa20.71■□□□□ 0.91
LDLRAD3-205ENST00000532490 SENP3-EIF4A1A0A087X0R7 540 aa20.7■□□□□ 0.9
LDLRAD3-205ENST00000532490 EIF2S2P20042 333 aaKnown RBP20.7■□□□□ 0.9
LDLRAD3-205ENST00000532490 PROSER3Q2NL68 480 aa20.7■□□□□ 0.9
LDLRAD3-205ENST00000532490 KIF6Q6ZMV9 814 aa20.7■□□□□ 0.9
LDLRAD3-205ENST00000532490 CNKSR1Q969H4 720 aa20.7■□□□□ 0.9
LDLRAD3-205ENST00000532490 ARFGEF2Q9Y6D5 1785 aa20.69■□□□□ 0.9
LDLRAD3-205ENST00000532490 FER1L6Q2WGJ9 1857 aa20.69■□□□□ 0.9
LDLRAD3-205ENST00000532490 CCDC88AQ3V6T2 1871 aa20.69■□□□□ 0.9
LDLRAD3-205ENST00000532490 C21orf2O43822 256 aa20.69■□□□□ 0.9
LDLRAD3-205ENST00000532490 LMNB1P20700 586 aa20.69■□□□□ 0.9
LDLRAD3-205ENST00000532490 KRT24Q2M2I5 525 aa20.69■□□□□ 0.9
LDLRAD3-205ENST00000532490 ZBTB3Q9H5J0 574 aa20.69■□□□□ 0.9
LDLRAD3-205ENST00000532490 NMRK2Q9NPI5 230 aa20.69■□□□□ 0.9
LDLRAD3-205ENST00000532490 FAM177BA6PVY3 158 aa20.68■□□□□ 0.9
LDLRAD3-205ENST00000532490 CCDC184Q52MB2 194 aa20.68■□□□□ 0.9
LDLRAD3-205ENST00000532490 PRPF40BQ6NWY9 871 aaKnown RBP20.68■□□□□ 0.9
LDLRAD3-205ENST00000532490 ZNF34Q8IZ26 560 aa20.68■□□□□ 0.9
LDLRAD3-205ENST00000532490 APAF1O14727 1248 aa20.67■□□□□ 0.9
LDLRAD3-205ENST00000532490 ANXA1P04083 346 aa20.67■□□□□ 0.9
LDLRAD3-205ENST00000532490 NPR1P16066 1061 aa20.67■□□□□ 0.9
LDLRAD3-205ENST00000532490 GIGYF2Q6Y7W6 1299 aaKnown RBP20.67■□□□□ 0.9
LDLRAD3-205ENST00000532490 C7orf43Q8WVR3 580 aa20.67■□□□□ 0.9
LDLRAD3-205ENST00000532490 CFAP44Q96MT7 982 aa20.67■□□□□ 0.9
LDLRAD3-205ENST00000532490 ZNF219Q9P2Y4 722 aaPredicted RBP20.67■□□□□ 0.9
LDLRAD3-205ENST00000532490 UBN2Q6ZU65 1347 aa20.67■□□□□ 0.9
LDLRAD3-205ENST00000532490 ZC3H4Q9UPT8 1303 aaKnown RBP20.67■□□□□ 0.9
LDLRAD3-205ENST00000532490 CACNA1SQ13698 1873 aa20.67■□□□□ 0.9
LDLRAD3-205ENST00000532490 NYXQ9GZU5 481 aa20.66■□□□□ 0.9
LDLRAD3-205ENST00000532490 LAS1LQ9Y4W2 734 aaKnown RBP20.66■□□□□ 0.9
LDLRAD3-205ENST00000532490 ABCC12Q96J65 1359 aa20.65■□□□□ 0.9
LDLRAD3-205ENST00000532490 IBTKQ9P2D0 1353 aaPredicted RBP20.65■□□□□ 0.9
LDLRAD3-205ENST00000532490 ZNF853P0CG23 659 aa20.65■□□□□ 0.9
LDLRAD3-205ENST00000532490 GPTP24298 496 aa20.65■□□□□ 0.9
LDLRAD3-205ENST00000532490 SUSD4Q5VX71 490 aa20.65■□□□□ 0.9
LDLRAD3-205ENST00000532490 TNRC6CQ9HCJ0 1690 aaKnown RBP20.64■□□□□ 0.9
LDLRAD3-205ENST00000532490 LTBP3Q9NS15 1303 aa20.64■□□□□ 0.89
LDLRAD3-205ENST00000532490 ZNF316A6NFI3 1004 aaPredicted RBP20.64■□□□□ 0.89
LDLRAD3-205ENST00000532490 ERFEQ4G0M1 354 aa20.64■□□□□ 0.89
LDLRAD3-205ENST00000532490 NUTM1Q86Y26 1132 aa20.64■□□□□ 0.89
LDLRAD3-205ENST00000532490 NECTIN2Q92692 538 aa20.64■□□□□ 0.89
LDLRAD3-205ENST00000532490 DICER1Q9UPY3 1922 aaKnown RBP20.63■□□□□ 0.89
LDLRAD3-205ENST00000532490 KDM2BQ8NHM5 1336 aa20.63■□□□□ 0.89
LDLRAD3-205ENST00000532490 TOMM70O94826 608 aa20.63■□□□□ 0.89
LDLRAD3-205ENST00000532490 HOXB7P09629 217 aa20.63■□□□□ 0.89
LDLRAD3-205ENST00000532490 CRY2Q49AN0 593 aa20.63■□□□□ 0.89
LDLRAD3-205ENST00000532490 COPS6Q7L5N1 327 aa20.63■□□□□ 0.89
LDLRAD3-205ENST00000532490 DDX21Q9NR30 783 aaKnown RBP eCLIP20.63■□□□□ 0.89
LDLRAD3-205ENST00000532490 RIC1Q4ADV7 1423 aa20.62■□□□□ 0.89
LDLRAD3-205ENST00000532490 CEP350Q5VT06 3117 aa20.62■□□□□ 0.89
LDLRAD3-205ENST00000532490 NTSR2O95665 410 aa20.62■□□□□ 0.89
LDLRAD3-205ENST00000532490 GTF2E1P29083 439 aaPredicted RBP20.62■□□□□ 0.89
LDLRAD3-205ENST00000532490 SOGA3Q5TF21 947 aa20.62■□□□□ 0.89
LDLRAD3-205ENST00000532490 MBIPQ9NS73 344 aa20.62■□□□□ 0.89
LDLRAD3-205ENST00000532490 TIAM2Q8IVF5 1701 aa20.61■□□□□ 0.89
LDLRAD3-205ENST00000532490 HSPA6P17066 643 aa20.61■□□□□ 0.89
LDLRAD3-205ENST00000532490 XAGE3Q8WTP9 111 aa20.61■□□□□ 0.89
LDLRAD3-205ENST00000532490 TAOK3Q9H2K8 898 aa20.61■□□□□ 0.89
LDLRAD3-205ENST00000532490 GLTPD2A6NH11 291 aa20.6■□□□□ 0.89
LDLRAD3-205ENST00000532490 PARP10Q53GL7 1025 aa20.6■□□□□ 0.89
LDLRAD3-205ENST00000532490 RRAGCQ9HB90 399 aa20.6■□□□□ 0.89
LDLRAD3-205ENST00000532490 IFT57Q9NWB7 429 aa20.6■□□□□ 0.89
LDLRAD3-205ENST00000532490 CHPF2Q9P2E5 772 aa20.6■□□□□ 0.89
LDLRAD3-205ENST00000532490 ALDH1B1P30837 517 aa20.59■□□□□ 0.89
LDLRAD3-205ENST00000532490 AIMP1Q12904 312 aaKnown RBP20.59■□□□□ 0.89
LDLRAD3-205ENST00000532490 HDGFL1Q5TGJ6 251 aa20.59■□□□□ 0.89
LDLRAD3-205ENST00000532490 HOXA10P31260 410 aaPredicted RBP20.58■□□□□ 0.89
LDLRAD3-205ENST00000532490 CCDC93Q567U6 631 aa20.58■□□□□ 0.89
LDLRAD3-205ENST00000532490 DUSP27Q5VZP5 1158 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms