RNA–Protein interactions for RNA: ENST00000532006.1

LCN10-208, Transcript of lipocalin 10, humanhuman

TSL 1 (best)

Gene LCN10, Length 443 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN10-208ENST00000532006 PIP4K2AP48426 406 aaPredicted RBP18.61■□□□□ 0.57
LCN10-208ENST00000532006 TPTE2Q6XPS3 522 aa18.61■□□□□ 0.57
LCN10-208ENST00000532006 THUMPD2Q9BTF0 503 aaKnown RBP18.61■□□□□ 0.57
LCN10-208ENST00000532006 KIF6Q6ZMV9 814 aa18.6■□□□□ 0.57
LCN10-208ENST00000532006 CNKSR1Q969H4 720 aa18.6■□□□□ 0.57
LCN10-208ENST00000532006 ZNF622Q969S3 477 aaKnown RBP eCLIP18.6■□□□□ 0.57
LCN10-208ENST00000532006 NIP7Q9Y221 180 aaKnown RBP eCLIP18.6■□□□□ 0.57
LCN10-208ENST00000532006 KDM2BQ8NHM5 1336 aa18.59■□□□□ 0.57
LCN10-208ENST00000532006 SENP3-EIF4A1A0A087X0R7 540 aa18.59■□□□□ 0.57
LCN10-208ENST00000532006 SOGA3Q5TF21 947 aa18.59■□□□□ 0.57
LCN10-208ENST00000532006 STYK1Q6J9G0 422 aa18.59■□□□□ 0.57
LCN10-208ENST00000532006 RNF181Q9P0P0 153 aa18.59■□□□□ 0.57
LCN10-208ENST00000532006 LMNB1P20700 586 aa18.58■□□□□ 0.56
LCN10-208ENST00000532006 NYXQ9GZU5 481 aa18.58■□□□□ 0.56
LCN10-208ENST00000532006 RRP7AQ9Y3A4 280 aaKnown RBP18.58■□□□□ 0.56
LCN10-208ENST00000532006 ANKRD31Q8N7Z5 1873 aa18.58■□□□□ 0.56
LCN10-208ENST00000532006 GTF2E1P29083 439 aaPredicted RBP18.57■□□□□ 0.56
LCN10-208ENST00000532006 MASTLQ96GX5 879 aa18.57■□□□□ 0.56
LCN10-208ENST00000532006 MAP3K15Q6ZN16 1313 aa18.56■□□□□ 0.56
LCN10-208ENST00000532006 SRGNP10124 158 aa18.56■□□□□ 0.56
LCN10-208ENST00000532006 NEUROD2Q15784 382 aa18.56■□□□□ 0.56
LCN10-208ENST00000532006 CCDC146Q8IYE0 955 aa18.56■□□□□ 0.56
LCN10-208ENST00000532006 ADAMTS8Q9UP79 889 aa18.56■□□□□ 0.56
LCN10-208ENST00000532006 SBF1O95248 1867 aa18.56■□□□□ 0.56
LCN10-208ENST00000532006 NGEFQ8N5V2 710 aa18.55■□□□□ 0.56
LCN10-208ENST00000532006 MYL6BP14649 208 aa18.54■□□□□ 0.56
LCN10-208ENST00000532006 NPR1P16066 1061 aa18.54■□□□□ 0.56
LCN10-208ENST00000532006 CALD1Q05682 793 aaKnown RBP18.54■□□□□ 0.56
LCN10-208ENST00000532006 KIF3CO14782 793 aa18.53■□□□□ 0.56
LCN10-208ENST00000532006 HLFQ16534 295 aa18.53■□□□□ 0.56
LCN10-208ENST00000532006 C16orf71Q8IYS4 520 aaPredicted RBP18.53■□□□□ 0.56
LCN10-208ENST00000532006 CCDC24Q8N4L8 307 aa18.53■□□□□ 0.56
LCN10-208ENST00000532006 KLRG2A4D1S0 409 aaPredicted RBP18.52■□□□□ 0.56
LCN10-208ENST00000532006 CHL1O00533 1208 aa18.52■□□□□ 0.56
LCN10-208ENST00000532006 TOMM70O94826 608 aa18.52■□□□□ 0.56
LCN10-208ENST00000532006 EIF2S2P20042 333 aaKnown RBP18.52■□□□□ 0.56
LCN10-208ENST00000532006 IBTKQ9P2D0 1353 aaPredicted RBP18.52■□□□□ 0.55
LCN10-208ENST00000532006 COL11A2P13942 1736 aaPredicted RBP18.52■□□□□ 0.55
LCN10-208ENST00000532006 LTBP3Q9NS15 1303 aa18.51■□□□□ 0.55
LCN10-208ENST00000532006 NUP98P52948 1817 aa18.51■□□□□ 0.55
LCN10-208ENST00000532006 C21orf2O43822 256 aa18.51■□□□□ 0.55
LCN10-208ENST00000532006 HOXB7P09629 217 aa18.51■□□□□ 0.55
LCN10-208ENST00000532006 ALDH1B1P30837 517 aa18.51■□□□□ 0.55
LCN10-208ENST00000532006 RASSF7Q02833 373 aa18.51■□□□□ 0.55
LCN10-208ENST00000532006 PARP10Q53GL7 1025 aa18.51■□□□□ 0.55
LCN10-208ENST00000532006 PRPF40BQ6NWY9 871 aaKnown RBP18.51■□□□□ 0.55
LCN10-208ENST00000532006 TRIM35Q9UPQ4 493 aa18.51■□□□□ 0.55
LCN10-208ENST00000532006 ARFGEF2Q9Y6D5 1785 aa18.5■□□□□ 0.55
LCN10-208ENST00000532006 GIGYF2Q6Y7W6 1299 aaKnown RBP18.5■□□□□ 0.55
LCN10-208ENST00000532006 TTLL7Q6ZT98 887 aa18.5■□□□□ 0.55
LCN10-208ENST00000532006 PPP1R42Q7Z4L9 355 aa18.5■□□□□ 0.55
LCN10-208ENST00000532006 LAS1LQ9Y4W2 734 aaKnown RBP18.5■□□□□ 0.55
LCN10-208ENST00000532006 FAM177BA6PVY3 158 aa18.49■□□□□ 0.55
LCN10-208ENST00000532006 NFKBIEO00221 500 aa18.49■□□□□ 0.55
LCN10-208ENST00000532006 HSPA6P17066 643 aa18.49■□□□□ 0.55
LCN10-208ENST00000532006 HSP90AB3PQ58FF7 597 aa18.49■□□□□ 0.55
LCN10-208ENST00000532006 DPY19L2Q6NUT2 758 aa18.49■□□□□ 0.55
LCN10-208ENST00000532006 CFAP44Q96MT7 982 aa18.49■□□□□ 0.55
LCN10-208ENST00000532006 CHMP4AQ9BY43 222 aa18.49■□□□□ 0.55
LCN10-208ENST00000532006 TAOK3Q9H2K8 898 aa18.49■□□□□ 0.55
LCN10-208ENST00000532006 ZBTB3Q9H5J0 574 aa18.49■□□□□ 0.55
LCN10-208ENST00000532006 TNRC6CQ9HCJ0 1690 aaKnown RBP18.48■□□□□ 0.55
LCN10-208ENST00000532006 NMRK2Q9NPI5 230 aa18.48■□□□□ 0.55
LCN10-208ENST00000532006 RIC1Q4ADV7 1423 aa18.48■□□□□ 0.55
LCN10-208ENST00000532006 FER1L6Q2WGJ9 1857 aa18.48■□□□□ 0.55
LCN10-208ENST00000532006 GLTPD2A6NH11 291 aa18.47■□□□□ 0.55
LCN10-208ENST00000532006 PDIA6Q15084 440 aa18.47■□□□□ 0.55
LCN10-208ENST00000532006 CCDC93Q567U6 631 aa18.47■□□□□ 0.55
LCN10-208ENST00000532006 ZNF34Q8IZ26 560 aa18.47■□□□□ 0.55
LCN10-208ENST00000532006 RBM46Q8TBY0 533 aaKnown RBP18.47■□□□□ 0.55
LCN10-208ENST00000532006 DDX21Q9NR30 783 aaKnown RBP eCLIP18.47■□□□□ 0.55
LCN10-208ENST00000532006 ZNF219Q9P2Y4 722 aaPredicted RBP18.47■□□□□ 0.55
LCN10-208ENST00000532006 CCDC88AQ3V6T2 1871 aa18.47■□□□□ 0.55
LCN10-208ENST00000532006 RNF123Q5XPI4 1314 aa18.47■□□□□ 0.55
LCN10-208ENST00000532006 SLX4Q8IY92 1834 aa18.46■□□□□ 0.55
LCN10-208ENST00000532006 ERFEQ4G0M1 354 aa18.46■□□□□ 0.55
LCN10-208ENST00000532006 RTKN2Q8IZC4 609 aa18.46■□□□□ 0.55
LCN10-208ENST00000532006 CACNA1SQ13698 1873 aa18.46■□□□□ 0.54
LCN10-208ENST00000532006 DICER1Q9UPY3 1922 aaKnown RBP18.45■□□□□ 0.54
LCN10-208ENST00000532006 GPTP24298 496 aa18.45■□□□□ 0.54
LCN10-208ENST00000532006 GNAI1P63096 354 aa18.45■□□□□ 0.54
LCN10-208ENST00000532006 FSTL1Q12841 308 aa18.45■□□□□ 0.54
LCN10-208ENST00000532006 CRY2Q49AN0 593 aa18.45■□□□□ 0.54
LCN10-208ENST00000532006 GRIPAP1Q4V328 841 aa18.45■□□□□ 0.54
LCN10-208ENST00000532006 CC2D2BQ6DHV5 1058 aa18.45■□□□□ 0.54
LCN10-208ENST00000532006 RPGRQ92834 1020 aaKnown RBP18.45■□□□□ 0.54
LCN10-208ENST00000532006 ZNF316A6NFI3 1004 aaPredicted RBP18.44■□□□□ 0.54
LCN10-208ENST00000532006 APAF1O14727 1248 aa18.44■□□□□ 0.54
LCN10-208ENST00000532006 VEGFAP15692 232 aaPredicted RBP18.44■□□□□ 0.54
LCN10-208ENST00000532006 HDGFL1Q5TGJ6 251 aa18.44■□□□□ 0.54
LCN10-208ENST00000532006 LRP10Q7Z4F1 713 aa18.44■□□□□ 0.54
LCN10-208ENST00000532006 RRAGCQ9HB90 399 aa18.44■□□□□ 0.54
LCN10-208ENST00000532006 IFT57Q9NWB7 429 aa18.44■□□□□ 0.54
LCN10-208ENST00000532006 DBF4Q9UBU7 674 aaPredicted RBP18.44■□□□□ 0.54
LCN10-208ENST00000532006 TIAM2Q8IVF5 1701 aa18.43■□□□□ 0.54
LCN10-208ENST00000532006 APLP1P51693 650 aa18.43■□□□□ 0.54
LCN10-208ENST00000532006 SUSD4Q5VX71 490 aa18.43■□□□□ 0.54
LCN10-208ENST00000532006 COPS6Q7L5N1 327 aa18.43■□□□□ 0.54
LCN10-208ENST00000532006 NUTM1Q86Y26 1132 aa18.43■□□□□ 0.54
LCN10-208ENST00000532006 C7orf43Q8WVR3 580 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms