RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 ATP10DQ9P241 1426 aa14.06□□□□□ -0.16
GPATCH4-216ENST00000531900 BRCA1P38398 1863 aaKnown RBP14.06□□□□□ -0.16
GPATCH4-216ENST00000531900 SERPINB2P05120 415 aa14.05□□□□□ -0.16
GPATCH4-216ENST00000531900 TBC1D9BQ66K14 1250 aa14.05□□□□□ -0.16
GPATCH4-216ENST00000531900 CHMP4AQ9BY43 222 aa14.05□□□□□ -0.16
GPATCH4-216ENST00000531900 DDX21Q9NR30 783 aaKnown RBP eCLIP14.05□□□□□ -0.16
GPATCH4-216ENST00000531900 ZNF652Q9Y2D9 606 aa14.05□□□□□ -0.16
GPATCH4-216ENST00000531900 ZNF330Q9Y3S2 320 aaPredicted RBP14.05□□□□□ -0.16
GPATCH4-216ENST00000531900 LAS1LQ9Y4W2 734 aaKnown RBP14.05□□□□□ -0.16
GPATCH4-216ENST00000531900 KRT24Q2M2I5 525 aa14.04□□□□□ -0.16
GPATCH4-216ENST00000531900 DUSP27Q5VZP5 1158 aa14.04□□□□□ -0.16
GPATCH4-216ENST00000531900 ARHGAP27Q6ZUM4 889 aa14.04□□□□□ -0.16
GPATCH4-216ENST00000531900 MAP3K15Q6ZN16 1313 aa14.04□□□□□ -0.16
GPATCH4-216ENST00000531900 CARMIL3Q8ND23 1372 aa14.04□□□□□ -0.16
GPATCH4-216ENST00000531900 SENP3-EIF4A1A0A087X0R7 540 aa14.03□□□□□ -0.16
GPATCH4-216ENST00000531900 EIF2S2P20042 333 aaKnown RBP14.03□□□□□ -0.16
GPATCH4-216ENST00000531900 KCNA3P22001 575 aa14.03□□□□□ -0.16
GPATCH4-216ENST00000531900 DALRD3Q5D0E6 543 aaKnown RBP14.03□□□□□ -0.16
GPATCH4-216ENST00000531900 SETDB2Q96T68 719 aa14.03□□□□□ -0.16
GPATCH4-216ENST00000531900 DBF4Q9UBU7 674 aaPredicted RBP14.03□□□□□ -0.16
GPATCH4-216ENST00000531900 ZNF521Q96K83 1311 aa14.03□□□□□ -0.16
GPATCH4-216ENST00000531900 ADCY9O60503 1353 aa14.03□□□□□ -0.16
GPATCH4-216ENST00000531900 CACNA1FO60840 1977 aa14.02□□□□□ -0.16
GPATCH4-216ENST00000531900 N4BP2Q86UW6 1770 aaPredicted RBP14.02□□□□□ -0.16
GPATCH4-216ENST00000531900 MYL6BP14649 208 aa14.02□□□□□ -0.17
GPATCH4-216ENST00000531900 PROSER3Q2NL68 480 aa14.02□□□□□ -0.17
GPATCH4-216ENST00000531900 HDGFL1Q5TGJ6 251 aa14.02□□□□□ -0.17
GPATCH4-216ENST00000531900 DIEXFQ68CQ4 756 aaKnown RBP14.02□□□□□ -0.17
GPATCH4-216ENST00000531900 TTLL7Q6ZT98 887 aa14.02□□□□□ -0.17
GPATCH4-216ENST00000531900 ZNF526Q8TF50 670 aaPredicted RBP14.02□□□□□ -0.17
GPATCH4-216ENST00000531900 PDZRN3Q9UPQ7 1066 aa14.02□□□□□ -0.17
GPATCH4-216ENST00000531900 HLFQ16534 295 aa14.01□□□□□ -0.17
GPATCH4-216ENST00000531900 PRR5LQ6MZQ0 368 aa14.01□□□□□ -0.17
GPATCH4-216ENST00000531900 GIGYF2Q6Y7W6 1299 aaKnown RBP14.01□□□□□ -0.17
GPATCH4-216ENST00000531900 KIF6Q6ZMV9 814 aa14.01□□□□□ -0.17
GPATCH4-216ENST00000531900 C8orf58Q8NAV2 365 aa14.01□□□□□ -0.17
GPATCH4-216ENST00000531900 IBTKQ9P2D0 1353 aaPredicted RBP14□□□□□ -0.17
GPATCH4-216ENST00000531900 ANKRD31Q8N7Z5 1873 aa14□□□□□ -0.17
GPATCH4-216ENST00000531900 CHRNA5P30532 468 aa14□□□□□ -0.17
GPATCH4-216ENST00000531900 BICDL1Q6ZP65 573 aa14□□□□□ -0.17
GPATCH4-216ENST00000531900 ZNF34Q8IZ26 560 aa14□□□□□ -0.17
GPATCH4-216ENST00000531900 BRIP1Q9BX63 1249 aa14□□□□□ -0.17
GPATCH4-216ENST00000531900 HYPKQ9NX55 129 aa14□□□□□ -0.17
GPATCH4-216ENST00000531900 DLEC1Q9Y238 1755 aa14□□□□□ -0.17
GPATCH4-216ENST00000531900 ARFGEF1Q9Y6D6 1849 aa13.99□□□□□ -0.17
GPATCH4-216ENST00000531900 KLRG2A4D1S0 409 aaPredicted RBP13.99□□□□□ -0.17
GPATCH4-216ENST00000531900 COPS6Q7L5N1 327 aa13.99□□□□□ -0.17
GPATCH4-216ENST00000531900 CHPF2Q9P2E5 772 aa13.99□□□□□ -0.17
GPATCH4-216ENST00000531900 NIP7Q9Y221 180 aaKnown RBP eCLIP13.99□□□□□ -0.17
GPATCH4-216ENST00000531900 ANXA1P04083 346 aa13.98□□□□□ -0.17
GPATCH4-216ENST00000531900 TPTE2Q6XPS3 522 aa13.98□□□□□ -0.17
GPATCH4-216ENST00000531900 XAGE3Q8WTP9 111 aa13.98□□□□□ -0.17
GPATCH4-216ENST00000531900 TSR2Q969E8 191 aaKnown RBP13.98□□□□□ -0.17
GPATCH4-216ENST00000531900 FANCIQ9NVI1 1328 aa13.97□□□□□ -0.17
GPATCH4-216ENST00000531900 ANKRD36CQ5JPF3 1778 aa13.97□□□□□ -0.17
GPATCH4-216ENST00000531900 H0YIN7 160 aa13.97□□□□□ -0.17
GPATCH4-216ENST00000531900 NPHP1O15259 732 aa13.97□□□□□ -0.17
GPATCH4-216ENST00000531900 PDE6BP35913 854 aa13.97□□□□□ -0.17
GPATCH4-216ENST00000531900 HSP90AB3PQ58FF7 597 aa13.97□□□□□ -0.17
GPATCH4-216ENST00000531900 CCDC30Q5VVM6 783 aa13.97□□□□□ -0.17
GPATCH4-216ENST00000531900 TSPYL6Q8N831 410 aa13.97□□□□□ -0.17
GPATCH4-216ENST00000531900 CNBD1Q8NA66 436 aa13.97□□□□□ -0.17
GPATCH4-216ENST00000531900 RIC1Q4ADV7 1423 aa13.97□□□□□ -0.17
GPATCH4-216ENST00000531900 ELL2O00472 640 aaPredicted RBP13.96□□□□□ -0.17
GPATCH4-216ENST00000531900 GOLGA2Q08379 1002 aa13.96□□□□□ -0.17
GPATCH4-216ENST00000531900 PARP10Q53GL7 1025 aa13.96□□□□□ -0.17
GPATCH4-216ENST00000531900 C9orf131Q5VYM1 1079 aa13.96□□□□□ -0.17
GPATCH4-216ENST00000531900 ANKRD13DQ6ZTN6 518 aa13.96□□□□□ -0.17
GPATCH4-216ENST00000531900 NBPF5PQ86XG9 351 aaPredicted RBP13.96□□□□□ -0.17
GPATCH4-216ENST00000531900 C2CD5Q86YS7 1000 aa13.96□□□□□ -0.17
GPATCH4-216ENST00000531900 TTLL6Q8N841 843 aa13.96□□□□□ -0.17
GPATCH4-216ENST00000531900 PLBD2Q8NHP8 589 aa13.96□□□□□ -0.17
GPATCH4-216ENST00000531900 NECTIN2Q92692 538 aa13.96□□□□□ -0.17
GPATCH4-216ENST00000531900 NYXQ9GZU5 481 aa13.96□□□□□ -0.17
GPATCH4-216ENST00000531900 ZBTB3Q9H5J0 574 aa13.96□□□□□ -0.17
GPATCH4-216ENST00000531900 MYH16Q9H6N6 1097 aa13.96□□□□□ -0.17
GPATCH4-216ENST00000531900 SPINK5Q9NQ38 1064 aaPredicted RBP13.96□□□□□ -0.17
GPATCH4-216ENST00000531900 RNF123Q5XPI4 1314 aa13.95□□□□□ -0.18
GPATCH4-216ENST00000531900 UBN2Q6ZU65 1347 aa13.95□□□□□ -0.18
GPATCH4-216ENST00000531900 ST5P78524 1137 aa13.95□□□□□ -0.18
GPATCH4-216ENST00000531900 TRIM28Q13263 835 aaKnown RBP13.95□□□□□ -0.18
GPATCH4-216ENST00000531900 TCIRG1Q13488 830 aa13.95□□□□□ -0.18
GPATCH4-216ENST00000531900 TWISTNBQ3B726 338 aaPredicted RBP13.95□□□□□ -0.18
GPATCH4-216ENST00000531900 MIER1Q8N108 512 aa13.95□□□□□ -0.18
GPATCH4-216ENST00000531900 SALL2Q9Y467 1007 aaPredicted RBP13.95□□□□□ -0.18
GPATCH4-216ENST00000531900 VAMP4O75379 141 aa13.94□□□□□ -0.18
GPATCH4-216ENST00000531900 RNF181Q9P0P0 153 aa13.94□□□□□ -0.18
GPATCH4-216ENST00000531900 NTSR2O95665 410 aa13.93□□□□□ -0.18
GPATCH4-216ENST00000531900 SRGNP10124 158 aa13.93□□□□□ -0.18
GPATCH4-216ENST00000531900 AIMP1Q12904 312 aaKnown RBP13.93□□□□□ -0.18
GPATCH4-216ENST00000531900 SLC10A5Q5PT55 438 aa13.93□□□□□ -0.18
GPATCH4-216ENST00000531900 SUSD4Q5VX71 490 aa13.93□□□□□ -0.18
GPATCH4-216ENST00000531900 ISCA1Q9BUE6 129 aa13.93□□□□□ -0.18
GPATCH4-216ENST00000531900 COL11A2P13942 1736 aaPredicted RBP13.93□□□□□ -0.18
GPATCH4-216ENST00000531900 ARFGEF2Q9Y6D5 1785 aa13.92□□□□□ -0.18
GPATCH4-216ENST00000531900 KIF3CO14782 793 aa13.92□□□□□ -0.18
GPATCH4-216ENST00000531900 EXOSC9Q06265 439 aaKnown RBP13.92□□□□□ -0.18
GPATCH4-216ENST00000531900 CRY2Q49AN0 593 aa13.92□□□□□ -0.18
GPATCH4-216ENST00000531900 STYK1Q6J9G0 422 aa13.92□□□□□ -0.18
GPATCH4-216ENST00000531900 PPP1R42Q7Z4L9 355 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms