RNA–Protein interactions for RNA: ENST00000531046.1

LINC01016-204, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 1 (best)

Gene LINC01016, Length 822 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-204ENST00000531046 DUSP27Q5VZP5 1158 aa16.86■□□□□ 0.29
LINC01016-204ENST00000531046 CLEC4GQ6UXB4 293 aa16.86■□□□□ 0.29
LINC01016-204ENST00000531046 ZNF652Q9Y2D9 606 aa16.86■□□□□ 0.29
LINC01016-204ENST00000531046 NRXN2Q9P2S2 1712 aa16.86■□□□□ 0.29
LINC01016-204ENST00000531046 ERBB4Q15303 1308 aa16.86■□□□□ 0.29
LINC01016-204ENST00000531046 CARMIL3Q8ND23 1372 aa16.86■□□□□ 0.29
LINC01016-204ENST00000531046 FAM177BA6PVY3 158 aa16.85■□□□□ 0.29
LINC01016-204ENST00000531046 ELL2O00472 640 aaPredicted RBP16.85■□□□□ 0.29
LINC01016-204ENST00000531046 GRIN3BO60391 1043 aa16.85■□□□□ 0.29
LINC01016-204ENST00000531046 KCNA3P22001 575 aa16.85■□□□□ 0.29
LINC01016-204ENST00000531046 CCDC27Q2M243 656 aa16.85■□□□□ 0.29
LINC01016-204ENST00000531046 KIF6Q6ZMV9 814 aa16.85■□□□□ 0.29
LINC01016-204ENST00000531046 ZBTB3Q9H5J0 574 aa16.85■□□□□ 0.29
LINC01016-204ENST00000531046 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
LINC01016-204ENST00000531046 NPHP1O15259 732 aa16.84■□□□□ 0.29
LINC01016-204ENST00000531046 AIMP1Q12904 312 aaKnown RBP16.84■□□□□ 0.29
LINC01016-204ENST00000531046 HDGFL1Q5TGJ6 251 aa16.84■□□□□ 0.29
LINC01016-204ENST00000531046 PRR5LQ6MZQ0 368 aa16.84■□□□□ 0.29
LINC01016-204ENST00000531046 LRP10Q7Z4F1 713 aa16.84■□□□□ 0.29
LINC01016-204ENST00000531046 TSR2Q969E8 191 aaKnown RBP16.84■□□□□ 0.29
LINC01016-204ENST00000531046 NIP7Q9Y221 180 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC01016-204ENST00000531046 MAP3K15Q6ZN16 1313 aa16.84■□□□□ 0.29
LINC01016-204ENST00000531046 C8orf58Q8NAV2 365 aa16.83■□□□□ 0.28
LINC01016-204ENST00000531046 CHPF2Q9P2E5 772 aa16.83■□□□□ 0.28
LINC01016-204ENST00000531046 ERVV-1B6SEH8 477 aa16.82■□□□□ 0.28
LINC01016-204ENST00000531046 HOXB7P09629 217 aa16.82■□□□□ 0.28
LINC01016-204ENST00000531046 NBPF5PQ86XG9 351 aaPredicted RBP16.82■□□□□ 0.28
LINC01016-204ENST00000531046 CNBD1Q8NA66 436 aa16.82■□□□□ 0.28
LINC01016-204ENST00000531046 XAGE3Q8WTP9 111 aa16.82■□□□□ 0.28
LINC01016-204ENST00000531046 DDX21Q9NR30 783 aaKnown RBP eCLIP16.82■□□□□ 0.28
LINC01016-204ENST00000531046 PIM2Q9P1W9 311 aa16.82■□□□□ 0.28
LINC01016-204ENST00000531046 CHD4Q14839 1912 aa16.82■□□□□ 0.28
LINC01016-204ENST00000531046 GPTP24298 496 aa16.81■□□□□ 0.28
LINC01016-204ENST00000531046 COPS6Q7L5N1 327 aa16.81■□□□□ 0.28
LINC01016-204ENST00000531046 C2CD5Q86YS7 1000 aa16.81■□□□□ 0.28
LINC01016-204ENST00000531046 NUP98P52948 1817 aa16.81■□□□□ 0.28
LINC01016-204ENST00000531046 RGL2O15211 777 aa16.8■□□□□ 0.28
LINC01016-204ENST00000531046 ST5P78524 1137 aa16.8■□□□□ 0.28
LINC01016-204ENST00000531046 TSPYL6Q8N831 410 aa16.8■□□□□ 0.28
LINC01016-204ENST00000531046 BRCA1P38398 1863 aaKnown RBP16.8■□□□□ 0.28
LINC01016-204ENST00000531046 ANKRD31Q8N7Z5 1873 aa16.8■□□□□ 0.28
LINC01016-204ENST00000531046 H0YIN7 160 aa16.79■□□□□ 0.28
LINC01016-204ENST00000531046 NCBP3Q53F19 620 aaKnown RBP16.79■□□□□ 0.28
LINC01016-204ENST00000531046 DALRD3Q5D0E6 543 aaKnown RBP16.79■□□□□ 0.28
LINC01016-204ENST00000531046 GIGYF2Q6Y7W6 1299 aaKnown RBP16.79■□□□□ 0.28
LINC01016-204ENST00000531046 BRIP1Q9BX63 1249 aa16.79■□□□□ 0.28
LINC01016-204ENST00000531046 DBF4Q9UBU7 674 aaPredicted RBP16.79■□□□□ 0.28
LINC01016-204ENST00000531046 IL16Q14005 1332 aa16.78■□□□□ 0.28
LINC01016-204ENST00000531046 TPTE2Q6XPS3 522 aa16.78■□□□□ 0.28
LINC01016-204ENST00000531046 ATP10DQ9P241 1426 aa16.78■□□□□ 0.28
LINC01016-204ENST00000531046 UBN2Q6ZU65 1347 aa16.77■□□□□ 0.28
LINC01016-204ENST00000531046 PDE6BP35913 854 aa16.77■□□□□ 0.28
LINC01016-204ENST00000531046 DIEXFQ68CQ4 756 aaKnown RBP16.77■□□□□ 0.28
LINC01016-204ENST00000531046 ARHGAP27Q6ZUM4 889 aa16.77■□□□□ 0.28
LINC01016-204ENST00000531046 WDR63Q8IWG1 891 aa16.77■□□□□ 0.28
LINC01016-204ENST00000531046 ZNF622Q969S3 477 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC01016-204ENST00000531046 CCER2I3L3R5 266 aa16.76■□□□□ 0.27
LINC01016-204ENST00000531046 GTF2E1P29083 439 aaPredicted RBP16.76■□□□□ 0.27
LINC01016-204ENST00000531046 SUSD4Q5VX71 490 aa16.76■□□□□ 0.27
LINC01016-204ENST00000531046 NUTM1Q86Y26 1132 aa16.76■□□□□ 0.27
LINC01016-204ENST00000531046 ZNF34Q8IZ26 560 aa16.76■□□□□ 0.27
LINC01016-204ENST00000531046 HYPKQ9NX55 129 aa16.76■□□□□ 0.27
LINC01016-204ENST00000531046 FANCIQ9NVI1 1328 aa16.75■□□□□ 0.27
LINC01016-204ENST00000531046 TCERG1O14776 1098 aaKnown RBP16.75■□□□□ 0.27
LINC01016-204ENST00000531046 TTLL6Q8N841 843 aa16.75■□□□□ 0.27
LINC01016-204ENST00000531046 ZNF428Q96B54 188 aa16.75■□□□□ 0.27
LINC01016-204ENST00000531046 PHAXQ9H814 394 aaKnown RBP16.75■□□□□ 0.27
LINC01016-204ENST00000531046 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
LINC01016-204ENST00000531046 COL11A2P13942 1736 aaPredicted RBP16.75■□□□□ 0.27
LINC01016-204ENST00000531046 DLEC1Q9Y238 1755 aa16.74■□□□□ 0.27
LINC01016-204ENST00000531046 ERFEQ4G0M1 354 aa16.74■□□□□ 0.27
LINC01016-204ENST00000531046 NYXQ9GZU5 481 aa16.74■□□□□ 0.27
LINC01016-204ENST00000531046 ABCC12Q96J65 1359 aa16.74■□□□□ 0.27
LINC01016-204ENST00000531046 ARFGEF1Q9Y6D6 1849 aa16.73■□□□□ 0.27
LINC01016-204ENST00000531046 SRGNP10124 158 aa16.73■□□□□ 0.27
LINC01016-204ENST00000531046 TWISTNBQ3B726 338 aaPredicted RBP16.73■□□□□ 0.27
LINC01016-204ENST00000531046 CCDC30Q5VVM6 783 aa16.73■□□□□ 0.27
LINC01016-204ENST00000531046 ANKRD13DQ6ZTN6 518 aa16.73■□□□□ 0.27
LINC01016-204ENST00000531046 MIER1Q8N108 512 aa16.73■□□□□ 0.27
LINC01016-204ENST00000531046 PLBD2Q8NHP8 589 aa16.73■□□□□ 0.27
LINC01016-204ENST00000531046 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
LINC01016-204ENST00000531046 PDZRN3Q9UPQ7 1066 aa16.73■□□□□ 0.27
LINC01016-204ENST00000531046 NTSR2O95665 410 aa16.72■□□□□ 0.27
LINC01016-204ENST00000531046 EXOSC9Q06265 439 aaKnown RBP16.72■□□□□ 0.27
LINC01016-204ENST00000531046 TCIRG1Q13488 830 aa16.72■□□□□ 0.27
LINC01016-204ENST00000531046 PARP10Q53GL7 1025 aa16.72■□□□□ 0.27
LINC01016-204ENST00000531046 ZNF784Q8NCA9 323 aaPredicted RBP16.72■□□□□ 0.27
LINC01016-204ENST00000531046 GOLGA2Q08379 1002 aa16.71■□□□□ 0.27
LINC01016-204ENST00000531046 HSP90AB3PQ58FF7 597 aa16.71■□□□□ 0.27
LINC01016-204ENST00000531046 PPP1R42Q7Z4L9 355 aa16.71■□□□□ 0.27
LINC01016-204ENST00000531046 ANKRD36CQ5JPF3 1778 aa16.7■□□□□ 0.26
LINC01016-204ENST00000531046 ATP5J2-PTCD1G3V325 749 aa16.7■□□□□ 0.26
LINC01016-204ENST00000531046 STYK1Q6J9G0 422 aa16.7■□□□□ 0.26
LINC01016-204ENST00000531046 RIC3Q7Z5B4 369 aa16.7■□□□□ 0.26
LINC01016-204ENST00000531046 NLRP10Q86W26 655 aa16.7■□□□□ 0.26
LINC01016-204ENST00000531046 MASTLQ96GX5 879 aa16.7■□□□□ 0.26
LINC01016-204ENST00000531046 UTP14AQ9BVJ6 771 aaKnown RBP16.7■□□□□ 0.26
LINC01016-204ENST00000531046 CHMP4AQ9BY43 222 aa16.7■□□□□ 0.26
LINC01016-204ENST00000531046 ZNF521Q96K83 1311 aa16.7■□□□□ 0.26
LINC01016-204ENST00000531046 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms