RNA–Protein interactions for RNA: ENST00000530742.5

CLINT1-210, Transcript of clathrin interactor 1, humanhuman

TSL 5 BASIC

Gene CLINT1, Length 3,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-210ENST00000530742 STRCQ7RTU9 1775 aa15.23■□□□□ 0.03
CLINT1-210ENST00000530742 NHSL1Q5SYE7 1610 aa15.23■□□□□ 0.03
CLINT1-210ENST00000530742 ERBB4Q15303 1308 aa15.23■□□□□ 0.03
CLINT1-210ENST00000530742 RBM33Q96EV2 1170 aaKnown RBP15.23■□□□□ 0.03
CLINT1-210ENST00000530742 TM6SF1Q9BZW5 370 aa15.23■□□□□ 0.03
CLINT1-210ENST00000530742 SPG7Q9UQ90 795 aa15.23■□□□□ 0.03
CLINT1-210ENST00000530742 KCPQ6ZWJ8 1503 aa15.23■□□□□ 0.03
CLINT1-210ENST00000530742 GRM8O00222 908 aa15.23■□□□□ 0.03
CLINT1-210ENST00000530742 TSHZ3Q63HK5 1081 aa15.23■□□□□ 0.03
CLINT1-210ENST00000530742 ZGPATQ8N5A5 531 aaKnown RBP15.23■□□□□ 0.03
CLINT1-210ENST00000530742 SPATA31A3Q5VYP0 1347 aa15.22■□□□□ 0.03
CLINT1-210ENST00000530742 GAS2L3Q86XJ1 694 aa15.22■□□□□ 0.03
CLINT1-210ENST00000530742 NEK4P51957 841 aa15.22■□□□□ 0.03
CLINT1-210ENST00000530742 LARP1Q6PKG0 1096 aaKnown RBP15.21■□□□□ 0.03
CLINT1-210ENST00000530742 DCAF5Q96JK2 942 aa15.21■□□□□ 0.03
CLINT1-210ENST00000530742 PPP1R9BQ96SB3 815 aa15.21■□□□□ 0.03
CLINT1-210ENST00000530742 ALDH8A1Q9H2A2 487 aaPredicted RBP15.21■□□□□ 0.03
CLINT1-210ENST00000530742 ECHDC1Q9NTX5 307 aa15.21■□□□□ 0.03
CLINT1-210ENST00000530742 TRIM6-TRIM34B2RNG4 842 aa15.21■□□□□ 0.03
CLINT1-210ENST00000530742 IGKV5-2P06315 115 aa15.21■□□□□ 0.03
CLINT1-210ENST00000530742 NUTM1Q86Y26 1132 aa15.21■□□□□ 0.03
CLINT1-210ENST00000530742 IL1RAPL2Q9NP60 686 aa15.21■□□□□ 0.03
CLINT1-210ENST00000530742 TNS2Q63HR2 1409 aa15.21■□□□□ 0.02
CLINT1-210ENST00000530742 RABL6Q3YEC7 729 aaPredicted RBP15.2■□□□□ 0.02
CLINT1-210ENST00000530742 IFNL2Q8IZJ0 200 aa15.2■□□□□ 0.02
CLINT1-210ENST00000530742 TMEM87AQ8NBN3 555 aa15.2■□□□□ 0.02
CLINT1-210ENST00000530742 RILPL2Q969X0 211 aa15.2■□□□□ 0.02
CLINT1-210ENST00000530742 TATP17735 454 aaPredicted RBP15.2■□□□□ 0.02
CLINT1-210ENST00000530742 PKP1Q13835 747 aa15.2■□□□□ 0.02
CLINT1-210ENST00000530742 METTL22Q9BUU2 404 aaPredicted RBP15.2■□□□□ 0.02
CLINT1-210ENST00000530742 SNX14Q9Y5W7 946 aa15.2■□□□□ 0.02
CLINT1-210ENST00000530742 TOGARAM1Q9Y4F4 1720 aa15.2■□□□□ 0.02
CLINT1-210ENST00000530742 CLASRPQ8N2M8 674 aaKnown RBP15.19■□□□□ 0.02
CLINT1-210ENST00000530742 EVI5LQ96CN4 794 aa15.19■□□□□ 0.02
CLINT1-210ENST00000530742 SUCLG2Q96I99 432 aa15.19■□□□□ 0.02
CLINT1-210ENST00000530742 ANO2Q9NQ90 1003 aa15.19■□□□□ 0.02
CLINT1-210ENST00000530742 NEURL1BA8MQ27 555 aa15.19■□□□□ 0.02
CLINT1-210ENST00000530742 HIP1O00291 1037 aa15.19■□□□□ 0.02
CLINT1-210ENST00000530742 CADPS2Q86UW7 1296 aa15.19■□□□□ 0.02
CLINT1-210ENST00000530742 PLCH1Q4KWH8 1693 aa15.19■□□□□ 0.02
CLINT1-210ENST00000530742 SASH1O94885 1247 aa15.19■□□□□ 0.02
CLINT1-210ENST00000530742 RUFY2Q8WXA3 655 aa15.19■□□□□ 0.02
CLINT1-210ENST00000530742 FOXD4L1Q9NU39 408 aa15.19■□□□□ 0.02
CLINT1-210ENST00000530742 PRAMEF22A3QJZ6 481 aa15.18■□□□□ 0.02
CLINT1-210ENST00000530742 RAPGEF4Q8WZA2 1011 aa15.18■□□□□ 0.02
CLINT1-210ENST00000530742 GPATCH3Q96I76 525 aa15.18■□□□□ 0.02
CLINT1-210ENST00000530742 COPRSQ9NQ92 184 aa15.18■□□□□ 0.02
CLINT1-210ENST00000530742 RPAP1Q9BWH6 1393 aaPredicted RBP15.18■□□□□ 0.02
CLINT1-210ENST00000530742 NKX1-1Q15270 411 aaPredicted RBP15.18■□□□□ 0.02
CLINT1-210ENST00000530742 MED23Q9ULK4 1368 aa15.18■□□□□ 0.02
CLINT1-210ENST00000530742 RFX5P48382 616 aaPredicted RBP15.17■□□□□ 0.02
CLINT1-210ENST00000530742 GCKRQ14397 625 aa15.17■□□□□ 0.02
CLINT1-210ENST00000530742 C9orf78Q9NZ63 289 aaPredicted RBP15.17■□□□□ 0.02
CLINT1-210ENST00000530742 TSGA10IPQ3SY00 556 aa15.17■□□□□ 0.02
CLINT1-210ENST00000530742 WNK3Q9BYP7 1800 aa15.17■□□□□ 0.02
CLINT1-210ENST00000530742 LRP6O75581 1613 aa15.17■□□□□ 0.02
CLINT1-210ENST00000530742 SNRPA1P09661 255 aaKnown RBP15.17■□□□□ 0.02
CLINT1-210ENST00000530742 ATF3P18847 181 aa15.17■□□□□ 0.02
CLINT1-210ENST00000530742 CASP7P55210 303 aa15.17■□□□□ 0.02
CLINT1-210ENST00000530742 NECTIN1Q15223 517 aa15.17■□□□□ 0.02
CLINT1-210ENST00000530742 PANK2Q9BZ23 570 aa15.17■□□□□ 0.02
CLINT1-210ENST00000530742 GZF1Q9H116 711 aaPredicted RBP15.17■□□□□ 0.02
CLINT1-210ENST00000530742 ANXA1P04083 346 aa15.16■□□□□ 0.02
CLINT1-210ENST00000530742 PDIA4P13667 645 aaKnown RBP15.16■□□□□ 0.02
CLINT1-210ENST00000530742 XPCQ01831 940 aaPredicted RBP15.16■□□□□ 0.02
CLINT1-210ENST00000530742 GPT2Q8TD30 523 aa15.16■□□□□ 0.02
CLINT1-210ENST00000530742 BICC1Q9H694 974 aaKnown RBP15.16■□□□□ 0.02
CLINT1-210ENST00000530742 ZSWIM6Q9HCJ5 1215 aa15.16■□□□□ 0.02
CLINT1-210ENST00000530742 COL5A2P05997 1499 aaPredicted RBP15.16■□□□□ 0.02
CLINT1-210ENST00000530742 DDX60Q8IY21 1712 aaKnown RBP15.15■□□□□ 0.02
CLINT1-210ENST00000530742 CYP27B1O15528 508 aa15.15■□□□□ 0.02
CLINT1-210ENST00000530742 MBD3O95983 291 aa15.15■□□□□ 0.02
CLINT1-210ENST00000530742 CWF19L2Q2TBE0 894 aaKnown RBP15.15■□□□□ 0.02
CLINT1-210ENST00000530742 VPS53Q5VIR6 699 aa15.15■□□□□ 0.02
CLINT1-210ENST00000530742 DDX49Q9Y6V7 483 aaKnown RBP15.15■□□□□ 0.02
CLINT1-210ENST00000530742 MCTP1Q6DN14 999 aa15.15■□□□□ 0.02
CLINT1-210ENST00000530742 CLCN1P35523 988 aa15.15■□□□□ 0.02
CLINT1-210ENST00000530742 ZSCAN23Q3MJ62 389 aa15.14■□□□□ 0.01
CLINT1-210ENST00000530742 MAP4K1Q92918 833 aa15.14■□□□□ 0.01
CLINT1-210ENST00000530742 SOS2Q07890 1332 aaPredicted RBP15.14■□□□□ 0.01
CLINT1-210ENST00000530742 RRAGDQ9NQL2 400 aaPredicted RBP15.14■□□□□ 0.01
CLINT1-210ENST00000530742 LAMA4Q16363 1823 aa15.14■□□□□ 0.01
CLINT1-210ENST00000530742 CCDC173Q0VFZ6 552 aa15.14■□□□□ 0.01
CLINT1-210ENST00000530742 FMNL2Q96PY5 1086 aa15.14■□□□□ 0.01
CLINT1-210ENST00000530742 TCHHQ07283 1943 aa15.13■□□□□ 0.01
CLINT1-210ENST00000530742 CICQ96RK0 1608 aaPredicted RBP15.13■□□□□ 0.01
CLINT1-210ENST00000530742 ANKRD36CQ5JPF3 1778 aa15.13■□□□□ 0.01
CLINT1-210ENST00000530742 WDR33Q9C0J8 1336 aaKnown RBP15.13■□□□□ 0.01
CLINT1-210ENST00000530742 HS1BP3Q53T59 392 aa15.13■□□□□ 0.01
CLINT1-210ENST00000530742 RASEFQ8IZ41 740 aa15.13■□□□□ 0.01
CLINT1-210ENST00000530742 EAF2Q96CJ1 260 aaPredicted RBP15.13■□□□□ 0.01
CLINT1-210ENST00000530742 ZNF496Q96IT1 587 aaPredicted RBP15.13■□□□□ 0.01
CLINT1-210ENST00000530742 LIMCH1Q9UPQ0 1083 aa15.13■□□□□ 0.01
CLINT1-210ENST00000530742 USPL1Q5W0Q7 1092 aa15.13■□□□□ 0.01
CLINT1-210ENST00000530742 ZSCAN31Q96LW9 406 aaPredicted RBP15.13■□□□□ 0.01
CLINT1-210ENST00000530742 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.13■□□□□ 0.01
CLINT1-210ENST00000530742 CCDC171Q6TFL3 1326 aa15.12■□□□□ 0.01
CLINT1-210ENST00000530742 MYH15Q9Y2K3 1946 aa15.12■□□□□ 0.01
CLINT1-210ENST00000530742 NFATC2IPQ8NCF5 419 aa15.12■□□□□ 0.01
CLINT1-210ENST00000530742 PDLIM2Q96JY6 352 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms