RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 TSGA10IPQ3SY00 556 aa13.92□□□□□ -0.18
TRIM3-210ENST00000530724 FOXD4L5Q5VV16 416 aaPredicted RBP13.92□□□□□ -0.18
TRIM3-210ENST00000530724 UNC5CLQ8IV45 518 aa13.92□□□□□ -0.18
TRIM3-210ENST00000530724 CCDC112Q8NEF3 446 aa13.92□□□□□ -0.18
TRIM3-210ENST00000530724 FOXD4L4Q8WXT5 416 aaPredicted RBP13.92□□□□□ -0.18
TRIM3-210ENST00000530724 NUDT16Q96DE0 195 aaKnown RBP13.92□□□□□ -0.18
TRIM3-210ENST00000530724 STK31Q9BXU1 1019 aa13.92□□□□□ -0.18
TRIM3-210ENST00000530724 PNMA6EA0A0J9YXQ4 647 aa13.91□□□□□ -0.18
TRIM3-210ENST00000530724 HIP1O00291 1037 aa13.91□□□□□ -0.18
TRIM3-210ENST00000530724 CTAGE5O15320 804 aa13.91□□□□□ -0.18
TRIM3-210ENST00000530724 GLRX3O76003 335 aaKnown RBP13.91□□□□□ -0.18
TRIM3-210ENST00000530724 DCTN1Q14203 1278 aa13.91□□□□□ -0.18
TRIM3-210ENST00000530724 TERF2Q15554 542 aa13.91□□□□□ -0.18
TRIM3-210ENST00000530724 G2E3Q7L622 706 aa13.91□□□□□ -0.18
TRIM3-210ENST00000530724 KRT222Q8N1A0 295 aa13.91□□□□□ -0.18
TRIM3-210ENST00000530724 C17orf53Q8N3J3 647 aaPredicted RBP13.91□□□□□ -0.18
TRIM3-210ENST00000530724 ERO1AQ96HE7 468 aa13.91□□□□□ -0.18
TRIM3-210ENST00000530724 USP44Q9H0E7 712 aa13.91□□□□□ -0.18
TRIM3-210ENST00000530724 IGSF1Q8N6C5 1336 aa13.9□□□□□ -0.18
TRIM3-210ENST00000530724 PEAK1Q9H792 1746 aa13.9□□□□□ -0.18
TRIM3-210ENST00000530724 TRIM6-TRIM34B2RNG4 842 aa13.9□□□□□ -0.18
TRIM3-210ENST00000530724 PTGS1P23219 599 aa13.9□□□□□ -0.18
TRIM3-210ENST00000530724 GJB2P29033 226 aa13.9□□□□□ -0.18
TRIM3-210ENST00000530724 DNM1Q05193 864 aaKnown RBP13.9□□□□□ -0.18
TRIM3-210ENST00000530724 NECTIN1Q15223 517 aa13.9□□□□□ -0.18
TRIM3-210ENST00000530724 ATL3Q6DD88 541 aa13.9□□□□□ -0.18
TRIM3-210ENST00000530724 SULT6B1Q6IMI4 303 aa13.9□□□□□ -0.18
TRIM3-210ENST00000530724 TICAM2Q86XR7 235 aa13.9□□□□□ -0.18
TRIM3-210ENST00000530724 RASEFQ8IZ41 740 aa13.9□□□□□ -0.18
TRIM3-210ENST00000530724 JARID2Q92833 1246 aaPredicted RBP13.9□□□□□ -0.18
TRIM3-210ENST00000530724 IL25Q9H293 177 aa13.9□□□□□ -0.18
TRIM3-210ENST00000530724 CBX8Q9HC52 389 aa13.9□□□□□ -0.18
TRIM3-210ENST00000530724 CYP46A1Q9Y6A2 500 aa13.9□□□□□ -0.18
TRIM3-210ENST00000530724 CEP170BQ9Y4F5 1589 aaPredicted RBP13.89□□□□□ -0.19
TRIM3-210ENST00000530724 SBNO1A3KN83 1393 aa13.89□□□□□ -0.19
TRIM3-210ENST00000530724 TNNT1P13805 278 aa13.89□□□□□ -0.19
TRIM3-210ENST00000530724 ST3GAL1Q11201 340 aa13.89□□□□□ -0.19
TRIM3-210ENST00000530724 WAPLQ7Z5K2 1190 aa13.89□□□□□ -0.19
TRIM3-210ENST00000530724 TTC6Q86TZ1 520 aa13.89□□□□□ -0.19
TRIM3-210ENST00000530724 RHPN1Q8TCX5 695 aa13.89□□□□□ -0.19
TRIM3-210ENST00000530724 RILPL2Q969X0 211 aa13.89□□□□□ -0.19
TRIM3-210ENST00000530724 TSPYL1Q9H0U9 437 aa13.89□□□□□ -0.19
TRIM3-210ENST00000530724 L2HGDHQ9H9P8 463 aa13.89□□□□□ -0.19
TRIM3-210ENST00000530724 FIBPO43427 364 aa13.88□□□□□ -0.19
TRIM3-210ENST00000530724 PSMA5P28066 241 aa13.88□□□□□ -0.19
TRIM3-210ENST00000530724 NUTM2DQ5VT03 806 aaPredicted RBP13.88□□□□□ -0.19
TRIM3-210ENST00000530724 CCDC186Q7Z3E2 898 aa13.88□□□□□ -0.19
TRIM3-210ENST00000530724 PDRG1Q9NUG6 133 aa13.88□□□□□ -0.19
TRIM3-210ENST00000530724 TSPYL4Q9UJ04 414 aa13.88□□□□□ -0.19
TRIM3-210ENST00000530724 USP6P35125 1406 aa13.88□□□□□ -0.19
TRIM3-210ENST00000530724 USP54Q70EL1 1684 aa13.88□□□□□ -0.19
TRIM3-210ENST00000530724 MED1Q15648 1581 aaPredicted RBP13.88□□□□□ -0.19
TRIM3-210ENST00000530724 RFX7Q2KHR2 1363 aa13.87□□□□□ -0.19
TRIM3-210ENST00000530724 TULP2O00295 520 aa13.87□□□□□ -0.19
TRIM3-210ENST00000530724 ATP8B1O43520 1251 aa13.87□□□□□ -0.19
TRIM3-210ENST00000530724 IQCB1Q15051 598 aa13.87□□□□□ -0.19
TRIM3-210ENST00000530724 IMPACTQ9P2X3 320 aa13.87□□□□□ -0.19
TRIM3-210ENST00000530724 HDAC5Q9UQL6 1122 aa13.87□□□□□ -0.19
TRIM3-210ENST00000530724 FLT4P35916 1363 aa13.86□□□□□ -0.19
TRIM3-210ENST00000530724 CFAP65Q6ZU64 1925 aaKnown RBP13.86□□□□□ -0.19
TRIM3-210ENST00000530724 UBTFL1P0CB47 393 aaPredicted RBP13.86□□□□□ -0.19
TRIM3-210ENST00000530724 H2AFXP16104 143 aaPredicted RBP13.86□□□□□ -0.19
TRIM3-210ENST00000530724 FBLN1P23142 703 aa13.86□□□□□ -0.19
TRIM3-210ENST00000530724 GSDMDP57764 484 aa13.86□□□□□ -0.19
TRIM3-210ENST00000530724 RRS1Q15050 365 aaKnown RBP13.86□□□□□ -0.19
TRIM3-210ENST00000530724 MCM10Q7L590 875 aa13.86□□□□□ -0.19
TRIM3-210ENST00000530724 RGS22Q8NE09 1264 aa13.86□□□□□ -0.19
TRIM3-210ENST00000530724 MAP4K1Q92918 833 aa13.86□□□□□ -0.19
TRIM3-210ENST00000530724 OSBPL5Q9H0X9 879 aaPredicted RBP13.86□□□□□ -0.19
TRIM3-210ENST00000530724 TNMDQ9H2S6 317 aa13.86□□□□□ -0.19
TRIM3-210ENST00000530724 TMEM51Q9NW97 253 aa13.86□□□□□ -0.19
TRIM3-210ENST00000530724 HMG20BQ9P0W2 317 aa13.86□□□□□ -0.19
TRIM3-210ENST00000530724 CALCOCO1Q9P1Z2 691 aa13.86□□□□□ -0.19
TRIM3-210ENST00000530724 LRRFIP2Q9Y608 721 aaKnown RBP13.86□□□□□ -0.19
TRIM3-210ENST00000530724 F6X3S4 739 aa13.85□□□□□ -0.19
TRIM3-210ENST00000530724 APBB1O00213 710 aa13.85□□□□□ -0.19
TRIM3-210ENST00000530724 CEP135Q66GS9 1140 aa13.85□□□□□ -0.19
TRIM3-210ENST00000530724 ERC1Q8IUD2 1116 aa13.85□□□□□ -0.19
TRIM3-210ENST00000530724 LRRC8AQ8IWT6 810 aa13.85□□□□□ -0.19
TRIM3-210ENST00000530724 CACTINQ8WUQ7 758 aaKnown RBP13.85□□□□□ -0.19
TRIM3-210ENST00000530724 LEO1Q8WVC0 666 aaPredicted RBP13.85□□□□□ -0.19
TRIM3-210ENST00000530724 ZSCAN16Q9H4T2 348 aaPredicted RBP13.85□□□□□ -0.19
TRIM3-210ENST00000530724 LMTK3Q96Q04 1460 aa13.85□□□□□ -0.19
TRIM3-210ENST00000530724 SPDYE4A6NLX3 237 aa13.84□□□□□ -0.19
TRIM3-210ENST00000530724 LARGE1O95461 756 aa13.84□□□□□ -0.19
TRIM3-210ENST00000530724 NPM1P06748 294 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRIM3-210ENST00000530724 ZKSCAN1P17029 563 aaPredicted RBP13.84□□□□□ -0.19
TRIM3-210ENST00000530724 LIG1P18858 919 aa13.84□□□□□ -0.19
TRIM3-210ENST00000530724 CASTP20810 708 aaKnown RBP13.84□□□□□ -0.19
TRIM3-210ENST00000530724 ZNF165P49910 485 aa13.84□□□□□ -0.19
TRIM3-210ENST00000530724 ME3Q16798 604 aa13.84□□□□□ -0.19
TRIM3-210ENST00000530724 ANO6Q4KMQ2 910 aa13.84□□□□□ -0.19
TRIM3-210ENST00000530724 EVI5LQ96CN4 794 aa13.84□□□□□ -0.19
TRIM3-210ENST00000530724 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
TRIM3-210ENST00000530724 MRC1P22897 1456 aa13.84□□□□□ -0.19
TRIM3-210ENST00000530724 MAP3K19Q56UN5 1328 aa13.84□□□□□ -0.19
TRIM3-210ENST00000530724 PSDA5PKW4 1024 aaPredicted RBP13.83□□□□□ -0.2
TRIM3-210ENST00000530724 MTHFSDQ2M296 383 aaKnown RBP13.83□□□□□ -0.2
TRIM3-210ENST00000530724 CCDC93Q567U6 631 aa13.83□□□□□ -0.2
TRIM3-210ENST00000530724 TSHZ3Q63HK5 1081 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms