RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 CENPBP07199 599 aaPredicted RBP11.12□□□□□ -0.63
CTSF-208ENST00000530565 CHRNA5P30532 468 aa11.12□□□□□ -0.63
CTSF-208ENST00000530565 CRKLP46109 303 aaKnown RBP11.12□□□□□ -0.63
CTSF-208ENST00000530565 DALRD3Q5D0E6 543 aaKnown RBP11.12□□□□□ -0.63
CTSF-208ENST00000530565 TSR2Q969E8 191 aaKnown RBP11.12□□□□□ -0.63
CTSF-208ENST00000530565 RRAGCQ9HB90 399 aa11.12□□□□□ -0.63
CTSF-208ENST00000530565 SPINK5Q9NQ38 1064 aaPredicted RBP11.12□□□□□ -0.63
CTSF-208ENST00000530565 RNF181Q9P0P0 153 aa11.12□□□□□ -0.63
CTSF-208ENST00000530565 USP16Q9Y5T5 823 aa11.12□□□□□ -0.63
CTSF-208ENST00000530565 KDM2BQ8NHM5 1336 aa11.11□□□□□ -0.63
CTSF-208ENST00000530565 POLRMTO00411 1230 aaKnown RBP11.11□□□□□ -0.63
CTSF-208ENST00000530565 TM4SF1P30408 202 aa11.11□□□□□ -0.63
CTSF-208ENST00000530565 PRELPP51888 382 aa11.11□□□□□ -0.63
CTSF-208ENST00000530565 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
CTSF-208ENST00000530565 KRT24Q2M2I5 525 aa11.11□□□□□ -0.63
CTSF-208ENST00000530565 INTS5Q6P9B9 1019 aaKnown RBP11.11□□□□□ -0.63
CTSF-208ENST00000530565 C16orf71Q8IYS4 520 aaPredicted RBP11.11□□□□□ -0.63
CTSF-208ENST00000530565 FANCIQ9NVI1 1328 aa11.1□□□□□ -0.63
CTSF-208ENST00000530565 MYH16Q9H6N6 1097 aa11.1□□□□□ -0.63
CTSF-208ENST00000530565 ZBTB1Q9Y2K1 713 aa11.1□□□□□ -0.63
CTSF-208ENST00000530565 CCDC88AQ3V6T2 1871 aa11.1□□□□□ -0.63
CTSF-208ENST00000530565 E9PSI1 815 aa11.09□□□□□ -0.63
CTSF-208ENST00000530565 A1BGP04217 495 aa11.09□□□□□ -0.63
CTSF-208ENST00000530565 HOXB7P09629 217 aa11.09□□□□□ -0.63
CTSF-208ENST00000530565 RASSF7Q02833 373 aa11.09□□□□□ -0.63
CTSF-208ENST00000530565 YTHDC1Q96MU7 727 aaKnown RBP11.09□□□□□ -0.63
CTSF-208ENST00000530565 EIF2S2P20042 333 aaKnown RBP11.08□□□□□ -0.64
CTSF-208ENST00000530565 CANXP27824 592 aaKnown RBP11.08□□□□□ -0.64
CTSF-208ENST00000530565 SLFN5Q08AF3 891 aa11.08□□□□□ -0.64
CTSF-208ENST00000530565 DUSP27Q5VZP5 1158 aa11.08□□□□□ -0.64
CTSF-208ENST00000530565 C8orf58Q8NAV2 365 aa11.08□□□□□ -0.64
CTSF-208ENST00000530565 SMC1BQ8NDV3 1235 aa11.08□□□□□ -0.64
CTSF-208ENST00000530565 CDCA7LQ96GN5 454 aa11.08□□□□□ -0.64
CTSF-208ENST00000530565 SOS1Q07889 1333 aaPredicted RBP11.08□□□□□ -0.64
CTSF-208ENST00000530565 ZBED9Q6R2W3 1325 aa11.08□□□□□ -0.64
CTSF-208ENST00000530565 ZC3H4Q9UPT8 1303 aaKnown RBP11.08□□□□□ -0.64
CTSF-208ENST00000530565 ELL2O00472 640 aaPredicted RBP11.07□□□□□ -0.64
CTSF-208ENST00000530565 CAPN15O75808 1086 aa11.07□□□□□ -0.64
CTSF-208ENST00000530565 IL6STP40189 918 aaPredicted RBP11.07□□□□□ -0.64
CTSF-208ENST00000530565 PIP4K2AP48426 406 aaPredicted RBP11.07□□□□□ -0.64
CTSF-208ENST00000530565 EIF5P55010 431 aaKnown RBP11.07□□□□□ -0.64
CTSF-208ENST00000530565 TNS4Q8IZW8 715 aa11.07□□□□□ -0.64
CTSF-208ENST00000530565 TSPYL6Q8N831 410 aa11.07□□□□□ -0.64
CTSF-208ENST00000530565 ERBB4Q15303 1308 aa11.07□□□□□ -0.64
CTSF-208ENST00000530565 ANKRD31Q8N7Z5 1873 aa11.06□□□□□ -0.64
CTSF-208ENST00000530565 COL15A1P39059 1388 aa11.06□□□□□ -0.64
CTSF-208ENST00000530565 POTECB2RU33 542 aa11.06□□□□□ -0.64
CTSF-208ENST00000530565 NBPF26B4DH59 902 aa11.06□□□□□ -0.64
CTSF-208ENST00000530565 EXOSC9Q06265 439 aaKnown RBP11.06□□□□□ -0.64
CTSF-208ENST00000530565 TWISTNBQ3B726 338 aaPredicted RBP11.06□□□□□ -0.64
CTSF-208ENST00000530565 HDGFL1Q5TGJ6 251 aa11.06□□□□□ -0.64
CTSF-208ENST00000530565 USPL1Q5W0Q7 1092 aa11.06□□□□□ -0.64
CTSF-208ENST00000530565 NBPF10Q6P3W6 841 aaKnown RBP11.06□□□□□ -0.64
CTSF-208ENST00000530565 TRMT2AQ8IZ69 625 aaKnown RBP11.06□□□□□ -0.64
CTSF-208ENST00000530565 NBPF15Q8N660 670 aa11.06□□□□□ -0.64
CTSF-208ENST00000530565 NECTIN2Q92692 538 aa11.06□□□□□ -0.64
CTSF-208ENST00000530565 BCL2L12Q9HB09 334 aa11.06□□□□□ -0.64
CTSF-208ENST00000530565 DICER1Q9UPY3 1922 aaKnown RBP11.05□□□□□ -0.64
CTSF-208ENST00000530565 CARMIL3Q8ND23 1372 aa11.05□□□□□ -0.64
CTSF-208ENST00000530565 GLTPD2A6NH11 291 aa11.05□□□□□ -0.64
CTSF-208ENST00000530565 HSPA1AP0DMV8 641 aaKnown RBP11.05□□□□□ -0.64
CTSF-208ENST00000530565 HSPA1BP0DMV9 641 aaKnown RBP11.05□□□□□ -0.64
CTSF-208ENST00000530565 COL11A2P13942 1736 aaPredicted RBP11.05□□□□□ -0.64
CTSF-208ENST00000530565 NFIXQ14938 502 aa11.05□□□□□ -0.64
CTSF-208ENST00000530565 ZNF330Q9Y3S2 320 aaPredicted RBP11.05□□□□□ -0.64
CTSF-208ENST00000530565 FER1L6Q2WGJ9 1857 aa11.04□□□□□ -0.64
CTSF-208ENST00000530565 A0A087WZG4 1122 aa11.04□□□□□ -0.64
CTSF-208ENST00000530565 NFKBIEO00221 500 aa11.04□□□□□ -0.64
CTSF-208ENST00000530565 VAMP4O75379 141 aa11.04□□□□□ -0.64
CTSF-208ENST00000530565 MYL6BP14649 208 aa11.04□□□□□ -0.64
CTSF-208ENST00000530565 LMNB1P20700 586 aa11.04□□□□□ -0.64
CTSF-208ENST00000530565 PDIA6Q15084 440 aa11.04□□□□□ -0.64
CTSF-208ENST00000530565 NPM2Q86SE8 214 aaKnown RBP11.04□□□□□ -0.64
CTSF-208ENST00000530565 CHMP4AQ9BY43 222 aa11.04□□□□□ -0.64
CTSF-208ENST00000530565 DDX21Q9NR30 783 aaKnown RBP eCLIP11.04□□□□□ -0.64
CTSF-208ENST00000530565 CHPF2Q9P2E5 772 aa11.04□□□□□ -0.64
CTSF-208ENST00000530565 ANXA1P04083 346 aa11.03□□□□□ -0.64
CTSF-208ENST00000530565 VEGFAP15692 232 aaPredicted RBP11.03□□□□□ -0.64
CTSF-208ENST00000530565 PROSER3Q2NL68 480 aa11.03□□□□□ -0.64
CTSF-208ENST00000530565 CCDC30Q5VVM6 783 aa11.03□□□□□ -0.64
CTSF-208ENST00000530565 LRP10Q7Z4F1 713 aa11.03□□□□□ -0.64
CTSF-208ENST00000530565 DBF4Q9UBU7 674 aaPredicted RBP11.03□□□□□ -0.64
CTSF-208ENST00000530565 NARFQ9UHQ1 456 aa11.03□□□□□ -0.64
CTSF-208ENST00000530565 SCN7AQ01118 1682 aa11.03□□□□□ -0.64
CTSF-208ENST00000530565 ZPR1O75312 459 aa11.02□□□□□ -0.65
CTSF-208ENST00000530565 SERPINB2P05120 415 aa11.02□□□□□ -0.65
CTSF-208ENST00000530565 DZIP3Q86Y13 1208 aaKnown RBP11.02□□□□□ -0.65
CTSF-208ENST00000530565 TBC1D2BQ9UPU7 963 aa11.02□□□□□ -0.65
CTSF-208ENST00000530565 BCORQ6W2J9 1755 aa11.02□□□□□ -0.65
CTSF-208ENST00000530565 TTLL6Q8N841 843 aa11.01□□□□□ -0.65
CTSF-208ENST00000530565 STK31Q9BXU1 1019 aa11.01□□□□□ -0.65
CTSF-208ENST00000530565 HYPKQ9NX55 129 aa11.01□□□□□ -0.65
CTSF-208ENST00000530565 ARFGEF2Q9Y6D5 1785 aa11□□□□□ -0.65
CTSF-208ENST00000530565 TCERG1O14776 1098 aaKnown RBP11□□□□□ -0.65
CTSF-208ENST00000530565 CAMTA2O94983 1202 aa11□□□□□ -0.65
CTSF-208ENST00000530565 KIF6Q6ZMV9 814 aa11□□□□□ -0.65
CTSF-208ENST00000530565 TTLL7Q6ZT98 887 aa11□□□□□ -0.65
CTSF-208ENST00000530565 C2CD5Q86YS7 1000 aa11□□□□□ -0.65
CTSF-208ENST00000530565 XAGE3Q8WTP9 111 aa11□□□□□ -0.65
CTSF-208ENST00000530565 CACNA1SQ13698 1873 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms