RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 ZNF652Q9Y2D9 606 aa21.92■■□□□ 1.1
SF3B2-209ENST00000530322 CHD4Q14839 1912 aa21.91■■□□□ 1.1
SF3B2-209ENST00000530322 HLFQ16534 295 aa21.91■■□□□ 1.1
SF3B2-209ENST00000530322 PROSER3Q2NL68 480 aa21.91■■□□□ 1.1
SF3B2-209ENST00000530322 DUSP27Q5VZP5 1158 aa21.91■■□□□ 1.1
SF3B2-209ENST00000530322 SETDB2Q96T68 719 aa21.91■■□□□ 1.1
SF3B2-209ENST00000530322 MAP3K15Q6ZN16 1313 aa21.9■■□□□ 1.1
SF3B2-209ENST00000530322 ERVV-1B6SEH8 477 aa21.9■■□□□ 1.1
SF3B2-209ENST00000530322 DPEP1P16444 411 aa21.9■■□□□ 1.1
SF3B2-209ENST00000530322 IL16Q14005 1332 aa21.89■■□□□ 1.1
SF3B2-209ENST00000530322 CCER2I3L3R5 266 aa21.89■■□□□ 1.09
SF3B2-209ENST00000530322 ANXA1P04083 346 aa21.89■■□□□ 1.09
SF3B2-209ENST00000530322 KCNA3P22001 575 aa21.89■■□□□ 1.09
SF3B2-209ENST00000530322 HDGFL1Q5TGJ6 251 aa21.89■■□□□ 1.09
SF3B2-209ENST00000530322 KIF6Q6ZMV9 814 aa21.89■■□□□ 1.09
SF3B2-209ENST00000530322 DDX21Q9NR30 783 aaKnown RBP eCLIP21.89■■□□□ 1.09
SF3B2-209ENST00000530322 WWC3Q9ULE0 1092 aa21.89■■□□□ 1.09
SF3B2-209ENST00000530322 SALL2Q9Y467 1007 aaPredicted RBP21.89■■□□□ 1.09
SF3B2-209ENST00000530322 ANKRD31Q8N7Z5 1873 aa21.89■■□□□ 1.09
SF3B2-209ENST00000530322 GRIN3BO60391 1043 aa21.87■■□□□ 1.09
SF3B2-209ENST00000530322 PRR5LQ6MZQ0 368 aa21.87■■□□□ 1.09
SF3B2-209ENST00000530322 C8orf58Q8NAV2 365 aa21.87■■□□□ 1.09
SF3B2-209ENST00000530322 TSR2Q969E8 191 aaKnown RBP21.87■■□□□ 1.09
SF3B2-209ENST00000530322 CHPF2Q9P2E5 772 aa21.87■■□□□ 1.09
SF3B2-209ENST00000530322 WDR63Q8IWG1 891 aa21.86■■□□□ 1.09
SF3B2-209ENST00000530322 ZBTB3Q9H5J0 574 aa21.86■■□□□ 1.09
SF3B2-209ENST00000530322 NIP7Q9Y221 180 aaKnown RBP eCLIP21.86■■□□□ 1.09
SF3B2-209ENST00000530322 DLEC1Q9Y238 1755 aa21.86■■□□□ 1.09
SF3B2-209ENST00000530322 ELL2O00472 640 aaPredicted RBP21.85■■□□□ 1.09
SF3B2-209ENST00000530322 CHRNA5P30532 468 aa21.85■■□□□ 1.09
SF3B2-209ENST00000530322 CNBD1Q8NA66 436 aa21.85■■□□□ 1.09
SF3B2-209ENST00000530322 DBF4Q9UBU7 674 aaPredicted RBP21.85■■□□□ 1.09
SF3B2-209ENST00000530322 ATP10DQ9P241 1426 aa21.85■■□□□ 1.09
SF3B2-209ENST00000530322 DIEXFQ68CQ4 756 aaKnown RBP21.84■■□□□ 1.09
SF3B2-209ENST00000530322 GIGYF2Q6Y7W6 1299 aaKnown RBP21.84■■□□□ 1.09
SF3B2-209ENST00000530322 COPS6Q7L5N1 327 aa21.84■■□□□ 1.09
SF3B2-209ENST00000530322 XAGE3Q8WTP9 111 aa21.84■■□□□ 1.09
SF3B2-209ENST00000530322 ARFGEF1Q9Y6D6 1849 aa21.83■■□□□ 1.09
SF3B2-209ENST00000530322 NBPF5PQ86XG9 351 aaPredicted RBP21.83■■□□□ 1.09
SF3B2-209ENST00000530322 CCDC24Q8N4L8 307 aa21.83■■□□□ 1.09
SF3B2-209ENST00000530322 TSPYL6Q8N831 410 aa21.83■■□□□ 1.09
SF3B2-209ENST00000530322 BRIP1Q9BX63 1249 aa21.83■■□□□ 1.09
SF3B2-209ENST00000530322 PIM2Q9P1W9 311 aa21.83■■□□□ 1.09
SF3B2-209ENST00000530322 YY1P25490 414 aa21.82■■□□□ 1.08
SF3B2-209ENST00000530322 AIMP1Q12904 312 aaKnown RBP21.82■■□□□ 1.08
SF3B2-209ENST00000530322 BCS1LQ9Y276 419 aa21.82■■□□□ 1.08
SF3B2-209ENST00000530322 NPHP1O15259 732 aa21.81■■□□□ 1.08
SF3B2-209ENST00000530322 HYPKQ9NX55 129 aa21.81■■□□□ 1.08
SF3B2-209ENST00000530322 ANKRD36CQ5JPF3 1778 aa21.81■■□□□ 1.08
SF3B2-209ENST00000530322 UBN2Q6ZU65 1347 aa21.8■■□□□ 1.08
SF3B2-209ENST00000530322 FANCIQ9NVI1 1328 aa21.8■■□□□ 1.08
SF3B2-209ENST00000530322 COL11A2P13942 1736 aaPredicted RBP21.8■■□□□ 1.08
SF3B2-209ENST00000530322 ST5P78524 1137 aa21.8■■□□□ 1.08
SF3B2-209ENST00000530322 TPTE2Q6XPS3 522 aa21.8■■□□□ 1.08
SF3B2-209ENST00000530322 ZNF34Q8IZ26 560 aa21.8■■□□□ 1.08
SF3B2-209ENST00000530322 ZNF521Q96K83 1311 aa21.8■■□□□ 1.08
SF3B2-209ENST00000530322 FAM177BA6PVY3 158 aa21.79■■□□□ 1.08
SF3B2-209ENST00000530322 H0YIN7 160 aa21.79■■□□□ 1.08
SF3B2-209ENST00000530322 GPTP24298 496 aa21.79■■□□□ 1.08
SF3B2-209ENST00000530322 PDE6BP35913 854 aa21.79■■□□□ 1.08
SF3B2-209ENST00000530322 C2CD5Q86YS7 1000 aa21.79■■□□□ 1.08
SF3B2-209ENST00000530322 SPINK5Q9NQ38 1064 aaPredicted RBP21.79■■□□□ 1.08
SF3B2-209ENST00000530322 DALRD3Q5D0E6 543 aaKnown RBP21.78■■□□□ 1.08
SF3B2-209ENST00000530322 CHMP4AQ9BY43 222 aa21.78■■□□□ 1.08
SF3B2-209ENST00000530322 PDZRN3Q9UPQ7 1066 aa21.78■■□□□ 1.08
SF3B2-209ENST00000530322 IBTKQ9P2D0 1353 aaPredicted RBP21.77■■□□□ 1.08
SF3B2-209ENST00000530322 TWISTNBQ3B726 338 aaPredicted RBP21.77■■□□□ 1.08
SF3B2-209ENST00000530322 CCDC30Q5VVM6 783 aa21.77■■□□□ 1.08
SF3B2-209ENST00000530322 MIER1Q8N108 512 aa21.77■■□□□ 1.08
SF3B2-209ENST00000530322 SUSD4Q5VX71 490 aa21.76■■□□□ 1.07
SF3B2-209ENST00000530322 PLBD2Q8NHP8 589 aa21.76■■□□□ 1.07
SF3B2-209ENST00000530322 NYXQ9GZU5 481 aa21.76■■□□□ 1.07
SF3B2-209ENST00000530322 ARFGEF2Q9Y6D5 1785 aa21.76■■□□□ 1.07
SF3B2-209ENST00000530322 TCIRG1Q13488 830 aa21.75■■□□□ 1.07
SF3B2-209ENST00000530322 PARP10Q53GL7 1025 aa21.75■■□□□ 1.07
SF3B2-209ENST00000530322 HSP90AB3PQ58FF7 597 aa21.75■■□□□ 1.07
SF3B2-209ENST00000530322 ANKRD13DQ6ZTN6 518 aa21.75■■□□□ 1.07
SF3B2-209ENST00000530322 PHAXQ9H814 394 aaKnown RBP21.75■■□□□ 1.07
SF3B2-209ENST00000530322 KLRG2A4D1S0 409 aaPredicted RBP21.74■■□□□ 1.07
SF3B2-209ENST00000530322 NTSR2O95665 410 aa21.74■■□□□ 1.07
SF3B2-209ENST00000530322 SRGNP10124 158 aa21.74■■□□□ 1.07
SF3B2-209ENST00000530322 GOLGA2Q08379 1002 aa21.74■■□□□ 1.07
SF3B2-209ENST00000530322 MYH16Q9H6N6 1097 aa21.74■■□□□ 1.07
SF3B2-209ENST00000530322 ABCC12Q96J65 1359 aa21.74■■□□□ 1.07
SF3B2-209ENST00000530322 TNRC6CQ9HCJ0 1690 aaKnown RBP21.73■■□□□ 1.07
SF3B2-209ENST00000530322 GTF2E1P29083 439 aaPredicted RBP21.73■■□□□ 1.07
SF3B2-209ENST00000530322 EXOSC9Q06265 439 aaKnown RBP21.73■■□□□ 1.07
SF3B2-209ENST00000530322 ERFEQ4G0M1 354 aa21.73■■□□□ 1.07
SF3B2-209ENST00000530322 NUTM1Q86Y26 1132 aa21.73■■□□□ 1.07
SF3B2-209ENST00000530322 TTLL6Q8N841 843 aa21.73■■□□□ 1.07
SF3B2-209ENST00000530322 PPP1R42Q7Z4L9 355 aa21.72■■□□□ 1.07
SF3B2-209ENST00000530322 ZNF622Q969S3 477 aaKnown RBP eCLIP21.72■■□□□ 1.072e-11■■□□□ 13.2
SF3B2-209ENST00000530322 CACNA1SQ13698 1873 aa21.72■■□□□ 1.07
SF3B2-209ENST00000530322 CACNA1FO60840 1977 aa21.72■■□□□ 1.07
SF3B2-209ENST00000530322 RIC1Q4ADV7 1423 aa21.72■■□□□ 1.07
SF3B2-209ENST00000530322 STYK1Q6J9G0 422 aa21.71■■□□□ 1.07
SF3B2-209ENST00000530322 ARHGAP27Q6ZUM4 889 aa21.71■■□□□ 1.07
SF3B2-209ENST00000530322 NLRP10Q86W26 655 aa21.71■■□□□ 1.07
SF3B2-209ENST00000530322 TCERG1O14776 1098 aaKnown RBP21.7■■□□□ 1.06
SF3B2-209ENST00000530322 VAMP4O75379 141 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms