RNA–Protein interactions for RNA: ENST00000529764.1

LTBP3-215, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-215ENST00000529764 AFDNP55196 1824 aaKnown RBP8.6□□□□□ -1.03
LTBP3-215ENST00000529764 ARFGEF1Q9Y6D6 1849 aa8.6□□□□□ -1.03
LTBP3-215ENST00000529764 EIF4A1P60842 406 aaKnown RBP8.6□□□□□ -1.03
LTBP3-215ENST00000529764 SOGA3Q5TF21 947 aa8.6□□□□□ -1.03
LTBP3-215ENST00000529764 TBC1D9BQ66K14 1250 aa8.6□□□□□ -1.03
LTBP3-215ENST00000529764 C2CD5Q86YS7 1000 aa8.6□□□□□ -1.03
LTBP3-215ENST00000529764 CCDC146Q8IYE0 955 aa8.6□□□□□ -1.03
LTBP3-215ENST00000529764 ZNF622Q969S3 477 aaKnown RBP eCLIP8.6□□□□□ -1.03
LTBP3-215ENST00000529764 BRIP1Q9BX63 1249 aa8.6□□□□□ -1.03
LTBP3-215ENST00000529764 ADAMTS8Q9UP79 889 aa8.6□□□□□ -1.03
LTBP3-215ENST00000529764 RRP7AQ9Y3A4 280 aaKnown RBP8.6□□□□□ -1.03
LTBP3-215ENST00000529764 KDM3BQ7LBC6 1761 aa8.6□□□□□ -1.03
LTBP3-215ENST00000529764 ERVV-1B6SEH8 477 aa8.59□□□□□ -1.03
LTBP3-215ENST00000529764 CAMTA2O94983 1202 aa8.59□□□□□ -1.03
LTBP3-215ENST00000529764 EIF2S2P20042 333 aaKnown RBP8.59□□□□□ -1.03
LTBP3-215ENST00000529764 SAMD1Q6SPF0 538 aaPredicted RBP8.59□□□□□ -1.03
LTBP3-215ENST00000529764 NGEFQ8N5V2 710 aa8.59□□□□□ -1.03
LTBP3-215ENST00000529764 CNKSR1Q969H4 720 aa8.59□□□□□ -1.03
LTBP3-215ENST00000529764 TMX4Q9H1E5 349 aaPredicted RBP8.59□□□□□ -1.03
LTBP3-215ENST00000529764 NIP7Q9Y221 180 aaKnown RBP eCLIP8.59□□□□□ -1.03
LTBP3-215ENST00000529764 BCORQ6W2J9 1755 aa8.58□□□□□ -1.04
LTBP3-215ENST00000529764 KDM2BQ8NHM5 1336 aa8.58□□□□□ -1.04
LTBP3-215ENST00000529764 NRXN2Q9P2S2 1712 aa8.58□□□□□ -1.04
LTBP3-215ENST00000529764 MYL6BP14649 208 aa8.58□□□□□ -1.04
LTBP3-215ENST00000529764 CHRNA5P30532 468 aa8.58□□□□□ -1.04
LTBP3-215ENST00000529764 HSP90AB3PQ58FF7 597 aa8.58□□□□□ -1.04
LTBP3-215ENST00000529764 PPP1R42Q7Z4L9 355 aa8.58□□□□□ -1.04
LTBP3-215ENST00000529764 C16orf71Q8IYS4 520 aaPredicted RBP8.58□□□□□ -1.04
LTBP3-215ENST00000529764 THUMPD2Q9BTF0 503 aaKnown RBP8.58□□□□□ -1.04
LTBP3-215ENST00000529764 BCL2L12Q9HB09 334 aa8.58□□□□□ -1.04
LTBP3-215ENST00000529764 BRCA1P38398 1863 aaKnown RBP8.57□□□□□ -1.04
LTBP3-215ENST00000529764 ATP10DQ9P241 1426 aa8.57□□□□□ -1.04
LTBP3-215ENST00000529764 PRAMEF22A3QJZ6 481 aa8.57□□□□□ -1.04
LTBP3-215ENST00000529764 HOXB7P09629 217 aa8.57□□□□□ -1.04
LTBP3-215ENST00000529764 ALDH1B1P30837 517 aa8.57□□□□□ -1.04
LTBP3-215ENST00000529764 PIP4K2AP48426 406 aaPredicted RBP8.57□□□□□ -1.04
LTBP3-215ENST00000529764 GNAI1P63096 354 aa8.57□□□□□ -1.04
LTBP3-215ENST00000529764 PRR5LQ6MZQ0 368 aa8.57□□□□□ -1.04
LTBP3-215ENST00000529764 ZNF526Q8TF50 670 aaPredicted RBP8.57□□□□□ -1.04
LTBP3-215ENST00000529764 MASTLQ96GX5 879 aa8.57□□□□□ -1.04
LTBP3-215ENST00000529764 CFAP44Q96MT7 982 aa8.57□□□□□ -1.04
LTBP3-215ENST00000529764 MAP3K15Q6ZN16 1313 aa8.56□□□□□ -1.04
LTBP3-215ENST00000529764 ZC3H4Q9UPT8 1303 aaKnown RBP8.56□□□□□ -1.04
LTBP3-215ENST00000529764 LMNB1P20700 586 aa8.56□□□□□ -1.04
LTBP3-215ENST00000529764 KCNA3P22001 575 aa8.56□□□□□ -1.04
LTBP3-215ENST00000529764 C1QTNF8P60827 252 aa8.56□□□□□ -1.04
LTBP3-215ENST00000529764 PARP10Q53GL7 1025 aa8.56□□□□□ -1.04
LTBP3-215ENST00000529764 C9orf131Q5VYM1 1079 aa8.56□□□□□ -1.04
LTBP3-215ENST00000529764 STYK1Q6J9G0 422 aa8.56□□□□□ -1.04
LTBP3-215ENST00000529764 DPY19L2Q6NUT2 758 aa8.56□□□□□ -1.04
LTBP3-215ENST00000529764 MRS2Q9HD23 443 aa8.56□□□□□ -1.04
LTBP3-215ENST00000529764 RNF181Q9P0P0 153 aa8.56□□□□□ -1.04
LTBP3-215ENST00000529764 KIAA1551Q9HCM1 1747 aa8.56□□□□□ -1.04
LTBP3-215ENST00000529764 DLEC1Q9Y238 1755 aa8.56□□□□□ -1.04
LTBP3-215ENST00000529764 FAM177BA6PVY3 158 aa8.55□□□□□ -1.04
LTBP3-215ENST00000529764 NBPF26B4DH59 902 aa8.55□□□□□ -1.04
LTBP3-215ENST00000529764 CHL1O00533 1208 aa8.55□□□□□ -1.04
LTBP3-215ENST00000529764 APAF1O14727 1248 aa8.55□□□□□ -1.04
LTBP3-215ENST00000529764 ABCB7O75027 752 aa8.55□□□□□ -1.04
LTBP3-215ENST00000529764 HSP90B1P14625 803 aaKnown RBP8.55□□□□□ -1.04
LTBP3-215ENST00000529764 NPR1P16066 1061 aa8.55□□□□□ -1.04
LTBP3-215ENST00000529764 HDGFL1Q5TGJ6 251 aa8.55□□□□□ -1.04
LTBP3-215ENST00000529764 NBPF10Q6P3W6 841 aaKnown RBP8.55□□□□□ -1.04
LTBP3-215ENST00000529764 NBPF15Q8N660 670 aa8.55□□□□□ -1.04
LTBP3-215ENST00000529764 RPGRQ92834 1020 aaKnown RBP8.55□□□□□ -1.04
LTBP3-215ENST00000529764 IFT57Q9NWB7 429 aa8.55□□□□□ -1.04
LTBP3-215ENST00000529764 DBF4Q9UBU7 674 aaPredicted RBP8.55□□□□□ -1.04
LTBP3-215ENST00000529764 RNF123Q5XPI4 1314 aa8.54□□□□□ -1.04
LTBP3-215ENST00000529764 NUP98P52948 1817 aa8.54□□□□□ -1.04
LTBP3-215ENST00000529764 AIMP1Q12904 312 aaKnown RBP8.54□□□□□ -1.04
LTBP3-215ENST00000529764 GRIPAP1Q4V328 841 aa8.54□□□□□ -1.04
LTBP3-215ENST00000529764 GIGYF2Q6Y7W6 1299 aaKnown RBP8.54□□□□□ -1.04
LTBP3-215ENST00000529764 ZBTB3Q9H5J0 574 aa8.54□□□□□ -1.04
LTBP3-215ENST00000529764 DDX21Q9NR30 783 aaKnown RBP eCLIP8.54□□□□□ -1.04
LTBP3-215ENST00000529764 HYPKQ9NX55 129 aa8.54□□□□□ -1.04
LTBP3-215ENST00000529764 ADCY9O60503 1353 aa8.53□□□□□ -1.04
LTBP3-215ENST00000529764 IBTKQ9P2D0 1353 aaPredicted RBP8.53□□□□□ -1.04
LTBP3-215ENST00000529764 SENP3-EIF4A1A0A087X0R7 540 aa8.53□□□□□ -1.04
LTBP3-215ENST00000529764 C21orf2O43822 256 aa8.53□□□□□ -1.04
LTBP3-215ENST00000529764 DDX58O95786 925 aaKnown RBP8.53□□□□□ -1.04
LTBP3-215ENST00000529764 SRGNP10124 158 aa8.53□□□□□ -1.04
LTBP3-215ENST00000529764 CCDC93Q567U6 631 aa8.53□□□□□ -1.04
LTBP3-215ENST00000529764 CC2D2BQ6DHV5 1058 aa8.53□□□□□ -1.04
LTBP3-215ENST00000529764 RTKN2Q8IZC4 609 aa8.53□□□□□ -1.04
LTBP3-215ENST00000529764 NECTIN2Q92692 538 aa8.53□□□□□ -1.04
LTBP3-215ENST00000529764 RBM17Q96I25 401 aaKnown RBP8.53□□□□□ -1.04
LTBP3-215ENST00000529764 NLRP3Q96P20 1036 aa8.53□□□□□ -1.04
LTBP3-215ENST00000529764 UTP14AQ9BVJ6 771 aaKnown RBP8.53□□□□□ -1.04
LTBP3-215ENST00000529764 TAOK3Q9H2K8 898 aa8.53□□□□□ -1.04
LTBP3-215ENST00000529764 TRIM35Q9UPQ4 493 aa8.53□□□□□ -1.04
LTBP3-215ENST00000529764 CACNA1SQ13698 1873 aa8.52□□□□□ -1.05
LTBP3-215ENST00000529764 GPTP24298 496 aa8.52□□□□□ -1.05
LTBP3-215ENST00000529764 GOLGA2Q08379 1002 aa8.52□□□□□ -1.05
LTBP3-215ENST00000529764 HLFQ16534 295 aa8.52□□□□□ -1.05
LTBP3-215ENST00000529764 ERFEQ4G0M1 354 aa8.52□□□□□ -1.05
LTBP3-215ENST00000529764 CCDC30Q5VVM6 783 aa8.52□□□□□ -1.05
LTBP3-215ENST00000529764 DUSP27Q5VZP5 1158 aa8.52□□□□□ -1.05
LTBP3-215ENST00000529764 PRPF40BQ6NWY9 871 aaKnown RBP8.52□□□□□ -1.05
LTBP3-215ENST00000529764 TTLL7Q6ZT98 887 aa8.52□□□□□ -1.05
LTBP3-215ENST00000529764 COPS6Q7L5N1 327 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms