RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 NEUROD2Q15784 382 aa20.24■□□□□ 0.83
CCDC90B-215ENST00000529745 ZNF330Q9Y3S2 320 aaPredicted RBP20.24■□□□□ 0.83
CCDC90B-215ENST00000529745 A0A0G2JLW4 131 aa20.23■□□□□ 0.83
CCDC90B-215ENST00000529745 PIP4K2AP48426 406 aaPredicted RBP20.23■□□□□ 0.83
CCDC90B-215ENST00000529745 TNS4Q8IZW8 715 aa20.23■□□□□ 0.83
CCDC90B-215ENST00000529745 APAF1O14727 1248 aa20.22■□□□□ 0.83
CCDC90B-215ENST00000529745 NCBP3Q53F19 620 aaKnown RBP20.22■□□□□ 0.83
CCDC90B-215ENST00000529745 ZNF652Q9Y2D9 606 aa20.22■□□□□ 0.83
CCDC90B-215ENST00000529745 COL11A2P13942 1736 aaPredicted RBP20.22■□□□□ 0.83
CCDC90B-215ENST00000529745 ARFGEF2Q9Y6D5 1785 aa20.21■□□□□ 0.83
CCDC90B-215ENST00000529745 CFAP44Q96MT7 982 aa20.21■□□□□ 0.83
CCDC90B-215ENST00000529745 TOMM70O94826 608 aa20.2■□□□□ 0.82
CCDC90B-215ENST00000529745 ZNF853P0CG23 659 aa20.2■□□□□ 0.82
CCDC90B-215ENST00000529745 SETDB2Q96T68 719 aa20.2■□□□□ 0.82
CCDC90B-215ENST00000529745 PIM2Q9P1W9 311 aa20.2■□□□□ 0.82
CCDC90B-215ENST00000529745 PDZRN3Q9UPQ7 1066 aa20.2■□□□□ 0.82
CCDC90B-215ENST00000529745 ANKRD36CQ5JPF3 1778 aa20.2■□□□□ 0.82
CCDC90B-215ENST00000529745 ERVV-1B6SEH8 477 aa20.19■□□□□ 0.82
CCDC90B-215ENST00000529745 HOXB7P09629 217 aa20.19■□□□□ 0.82
CCDC90B-215ENST00000529745 LRP10Q7Z4F1 713 aa20.19■□□□□ 0.82
CCDC90B-215ENST00000529745 JMYQ8N9B5 988 aa20.19■□□□□ 0.82
CCDC90B-215ENST00000529745 CALD1Q05682 793 aaKnown RBP20.18■□□□□ 0.82
CCDC90B-215ENST00000529745 PDIA6Q15084 440 aa20.18■□□□□ 0.82
CCDC90B-215ENST00000529745 CCDC27Q2M243 656 aa20.18■□□□□ 0.82
CCDC90B-215ENST00000529745 PRR5LQ6MZQ0 368 aa20.18■□□□□ 0.82
CCDC90B-215ENST00000529745 BICDL1Q6ZP65 573 aa20.18■□□□□ 0.82
CCDC90B-215ENST00000529745 KLRG1Q96E93 195 aa20.18■□□□□ 0.82
CCDC90B-215ENST00000529745 MRS2Q9HD23 443 aa20.18■□□□□ 0.82
CCDC90B-215ENST00000529745 BRIP1Q9BX63 1249 aa20.17■□□□□ 0.82
CCDC90B-215ENST00000529745 IFT57Q9NWB7 429 aa20.17■□□□□ 0.82
CCDC90B-215ENST00000529745 MAP3K15Q6ZN16 1313 aa20.17■□□□□ 0.82
CCDC90B-215ENST00000529745 SBF1O95248 1867 aa20.16■□□□□ 0.82
CCDC90B-215ENST00000529745 CHRNA5P30532 468 aa20.16■□□□□ 0.82
CCDC90B-215ENST00000529745 BCS1LQ9Y276 419 aa20.16■□□□□ 0.82
CCDC90B-215ENST00000529745 GNAI1P63096 354 aa20.15■□□□□ 0.82
CCDC90B-215ENST00000529745 IBTKQ9P2D0 1353 aaPredicted RBP20.14■□□□□ 0.81
CCDC90B-215ENST00000529745 SLC34A2O95436 690 aa20.14■□□□□ 0.81
CCDC90B-215ENST00000529745 PDE6BP35913 854 aa20.14■□□□□ 0.81
CCDC90B-215ENST00000529745 HLFQ16534 295 aa20.14■□□□□ 0.81
CCDC90B-215ENST00000529745 DALRD3Q5D0E6 543 aaKnown RBP20.14■□□□□ 0.81
CCDC90B-215ENST00000529745 TTLL7Q6ZT98 887 aa20.14■□□□□ 0.81
CCDC90B-215ENST00000529745 CNBD1Q8NA66 436 aa20.14■□□□□ 0.81
CCDC90B-215ENST00000529745 CACNA1SQ13698 1873 aa20.13■□□□□ 0.81
CCDC90B-215ENST00000529745 MYL6BP14649 208 aa20.13■□□□□ 0.81
CCDC90B-215ENST00000529745 KIF6Q6ZMV9 814 aa20.13■□□□□ 0.81
CCDC90B-215ENST00000529745 MBIPQ9NS73 344 aa20.13■□□□□ 0.81
CCDC90B-215ENST00000529745 WWC3Q9ULE0 1092 aa20.13■□□□□ 0.81
CCDC90B-215ENST00000529745 NIP7Q9Y221 180 aaKnown RBP eCLIP20.13■□□□□ 0.81
CCDC90B-215ENST00000529745 LAS1LQ9Y4W2 734 aaKnown RBP20.13■□□□□ 0.81
CCDC90B-215ENST00000529745 RIC1Q4ADV7 1423 aa20.12■□□□□ 0.81
CCDC90B-215ENST00000529745 H0YIN7 160 aa20.12■□□□□ 0.81
CCDC90B-215ENST00000529745 ST5P78524 1137 aa20.12■□□□□ 0.81
CCDC90B-215ENST00000529745 HTRA3P83110 453 aa20.12■□□□□ 0.81
CCDC90B-215ENST00000529745 KRT24Q2M2I5 525 aa20.12■□□□□ 0.81
CCDC90B-215ENST00000529745 GIGYF2Q6Y7W6 1299 aaKnown RBP20.12■□□□□ 0.81
CCDC90B-215ENST00000529745 DDX21Q9NR30 783 aaKnown RBP eCLIP20.12■□□□□ 0.81
CCDC90B-215ENST00000529745 FER1L6Q2WGJ9 1857 aa20.11■□□□□ 0.81
CCDC90B-215ENST00000529745 KLRG2A4D1S0 409 aaPredicted RBP20.11■□□□□ 0.81
CCDC90B-215ENST00000529745 EIF2S2P20042 333 aaKnown RBP20.11■□□□□ 0.81
CCDC90B-215ENST00000529745 C2CD5Q86YS7 1000 aa20.11■□□□□ 0.81
CCDC90B-215ENST00000529745 TPTE2Q6XPS3 522 aa20.1■□□□□ 0.81
CCDC90B-215ENST00000529745 NBPF5PQ86XG9 351 aaPredicted RBP20.1■□□□□ 0.81
CCDC90B-215ENST00000529745 TNRC6CQ9HCJ0 1690 aaKnown RBP20.1■□□□□ 0.81
CCDC90B-215ENST00000529745 IL16Q14005 1332 aa20.09■□□□□ 0.81
CCDC90B-215ENST00000529745 PROSER3Q2NL68 480 aa20.09■□□□□ 0.81
CCDC90B-215ENST00000529745 ZNF34Q8IZ26 560 aa20.09■□□□□ 0.81
CCDC90B-215ENST00000529745 NGEFQ8N5V2 710 aa20.09■□□□□ 0.81
CCDC90B-215ENST00000529745 TTLL6Q8N841 843 aa20.09■□□□□ 0.81
CCDC90B-215ENST00000529745 CCDC88AQ3V6T2 1871 aa20.09■□□□□ 0.81
CCDC90B-215ENST00000529745 SLX4Q8IY92 1834 aa20.09■□□□□ 0.81
CCDC90B-215ENST00000529745 HDGFL1Q5TGJ6 251 aa20.08■□□□□ 0.81
CCDC90B-215ENST00000529745 DUSP27Q5VZP5 1158 aa20.08■□□□□ 0.81
CCDC90B-215ENST00000529745 WWC1Q8IX03 1113 aa20.08■□□□□ 0.81
CCDC90B-215ENST00000529745 NYXQ9GZU5 481 aa20.08■□□□□ 0.81
CCDC90B-215ENST00000529745 DICER1Q9UPY3 1922 aaKnown RBP20.08■□□□□ 0.8
CCDC90B-215ENST00000529745 SRGNP10124 158 aa20.07■□□□□ 0.8
CCDC90B-215ENST00000529745 STYK1Q6J9G0 422 aa20.07■□□□□ 0.8
CCDC90B-215ENST00000529745 RBM46Q8TBY0 533 aaKnown RBP20.07■□□□□ 0.8
CCDC90B-215ENST00000529745 ZBTB3Q9H5J0 574 aa20.07■□□□□ 0.8
CCDC90B-215ENST00000529745 NMRK2Q9NPI5 230 aa20.07■□□□□ 0.8
CCDC90B-215ENST00000529745 DBF4Q9UBU7 674 aaPredicted RBP20.07■□□□□ 0.8
CCDC90B-215ENST00000529745 CACNA1FO60840 1977 aa20.06■□□□□ 0.8
CCDC90B-215ENST00000529745 UBN2Q6ZU65 1347 aa20.06■□□□□ 0.8
CCDC90B-215ENST00000529745 ANXA1P04083 346 aa20.06■□□□□ 0.8
CCDC90B-215ENST00000529745 ARHGAP27Q6ZUM4 889 aa20.06■□□□□ 0.8
CCDC90B-215ENST00000529745 CHPF2Q9P2E5 772 aa20.06■□□□□ 0.8
CCDC90B-215ENST00000529745 NPHP1O15259 732 aa20.05■□□□□ 0.8
CCDC90B-215ENST00000529745 PARP10Q53GL7 1025 aa20.05■□□□□ 0.8
CCDC90B-215ENST00000529745 COPS6Q7L5N1 327 aa20.05■□□□□ 0.8
CCDC90B-215ENST00000529745 CCDC24Q8N4L8 307 aa20.05■□□□□ 0.8
CCDC90B-215ENST00000529745 MASTLQ96GX5 879 aa20.05■□□□□ 0.8
CCDC90B-215ENST00000529745 CHMP4AQ9BY43 222 aa20.05■□□□□ 0.8
CCDC90B-215ENST00000529745 RNF123Q5XPI4 1314 aa20.04■□□□□ 0.8
CCDC90B-215ENST00000529745 LAMB2P55268 1798 aa20.04■□□□□ 0.8
CCDC90B-215ENST00000529745 HSP90AB3PQ58FF7 597 aa20.04■□□□□ 0.8
CCDC90B-215ENST00000529745 XAGE3Q8WTP9 111 aa20.04■□□□□ 0.8
CCDC90B-215ENST00000529745 NECTIN2Q92692 538 aa20.04■□□□□ 0.8
CCDC90B-215ENST00000529745 CNKSR1Q969H4 720 aa20.04■□□□□ 0.8
CCDC90B-215ENST00000529745 HYPKQ9NX55 129 aa20.04■□□□□ 0.8
CCDC90B-215ENST00000529745 NTSR2O95665 410 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms