RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 PDIA4P13667 645 aaKnown RBP8.77□□□□□ -1.01
CTR9-204ENST00000529355 ARSJQ5FYB0 599 aaPredicted RBP8.77□□□□□ -1.01
CTR9-204ENST00000529355 VWA5B2Q8N398 1253 aa8.77□□□□□ -1.01
CTR9-204ENST00000529355 GPR161Q8N6U8 529 aaKnown RBP8.77□□□□□ -1.01
CTR9-204ENST00000529355 ANO2Q9NQ90 1003 aa8.77□□□□□ -1.01
CTR9-204ENST00000529355 HCN2Q9UL51 889 aa8.77□□□□□ -1.01
CTR9-204ENST00000529355 SERPINB4P48594 390 aa8.76□□□□□ -1.01
CTR9-204ENST00000529355 UBAP2LQ14157 1087 aaKnown RBP8.76□□□□□ -1.01
CTR9-204ENST00000529355 NBPF1Q3BBV0 1214 aa8.76□□□□□ -1.01
CTR9-204ENST00000529355 C1orf216Q8TAB5 229 aa8.76□□□□□ -1.01
CTR9-204ENST00000529355 VTI1AQ96AJ9 217 aa8.76□□□□□ -1.01
CTR9-204ENST00000529355 ZDHHC3Q9NYG2 299 aa8.76□□□□□ -1.01
CTR9-204ENST00000529355 CHMP3Q9Y3E7 222 aa8.76□□□□□ -1.01
CTR9-204ENST00000529355 GPR25O00155 361 aa8.75□□□□□ -1.01
CTR9-204ENST00000529355 DGKZQ13574 1117 aa8.75□□□□□ -1.01
CTR9-204ENST00000529355 LRRC69Q6ZNQ3 347 aa8.75□□□□□ -1.01
CTR9-204ENST00000529355 BICDL1Q6ZP65 573 aa8.75□□□□□ -1.01
CTR9-204ENST00000529355 RHPN1Q8TCX5 695 aa8.75□□□□□ -1.01
CTR9-204ENST00000529355 DNMT3AQ9Y6K1 912 aaPredicted RBP8.75□□□□□ -1.01
CTR9-204ENST00000529355 CDC14CA4D256 554 aa8.74□□□□□ -1.01
CTR9-204ENST00000529355 TNFRSF10BO14763 440 aa8.74□□□□□ -1.01
CTR9-204ENST00000529355 TATP17735 454 aaPredicted RBP8.74□□□□□ -1.01
CTR9-204ENST00000529355 C1orf53Q5VUE5 145 aa8.74□□□□□ -1.01
CTR9-204ENST00000529355 TXNDC2Q86VQ3 553 aa8.74□□□□□ -1.01
CTR9-204ENST00000529355 AEBP1Q8IUX7 1158 aa8.74□□□□□ -1.01
CTR9-204ENST00000529355 GTF3C2Q8WUA4 911 aaPredicted RBP8.74□□□□□ -1.01
CTR9-204ENST00000529355 GTPBP3Q969Y2 492 aaKnown RBP8.74□□□□□ -1.01
CTR9-204ENST00000529355 ZNF837Q96EG3 531 aaPredicted RBP8.74□□□□□ -1.01
CTR9-204ENST00000529355 SUSD3Q96L08 255 aa8.74□□□□□ -1.01
CTR9-204ENST00000529355 ZBTB39O15060 712 aa8.73□□□□□ -1.01
CTR9-204ENST00000529355 BRD1O95696 1058 aa8.73□□□□□ -1.01
CTR9-204ENST00000529355 ZNF211Q13398 564 aaPredicted RBP8.73□□□□□ -1.01
CTR9-204ENST00000529355 CRISPLD1Q9H336 500 aa8.73□□□□□ -1.01
CTR9-204ENST00000529355 GRIN2CQ14957 1233 aa8.72□□□□□ -1.01
CTR9-204ENST00000529355 RTN1Q16799 776 aa8.72□□□□□ -1.01
CTR9-204ENST00000529355 C16orf46Q6P387 395 aa8.72□□□□□ -1.01
CTR9-204ENST00000529355 TRIM22Q8IYM9 498 aa8.72□□□□□ -1.01
CTR9-204ENST00000529355 ZCCHC2Q9C0B9 1178 aaKnown RBP8.72□□□□□ -1.01
CTR9-204ENST00000529355 NUCKS1Q9H1E3 243 aaKnown RBP8.72□□□□□ -1.01
CTR9-204ENST00000529355 PTCD1O75127 700 aaKnown RBP8.71□□□□□ -1.02
CTR9-204ENST00000529355 ABL1P00519 1130 aa8.71□□□□□ -1.02
CTR9-204ENST00000529355 ETFBKMTQ8IXQ9 262 aa8.71□□□□□ -1.02
CTR9-204ENST00000529355 PGBD3Q8N328 593 aa8.71□□□□□ -1.02
CTR9-204ENST00000529355 COL26A1Q96A83 441 aa8.71□□□□□ -1.02
CTR9-204ENST00000529355 MYO19Q96H55 970 aa8.71□□□□□ -1.02
CTR9-204ENST00000529355 VSIG8P0DPA2 414 aa8.7□□□□□ -1.02
CTR9-204ENST00000529355 ARID4AP29374 1257 aaPredicted RBP8.7□□□□□ -1.02
CTR9-204ENST00000529355 PDE4CQ08493 712 aa8.7□□□□□ -1.02
CTR9-204ENST00000529355 STRN4Q9NRL3 753 aa8.7□□□□□ -1.02
CTR9-204ENST00000529355 DMGDHQ9UI17 866 aaKnown RBP8.7□□□□□ -1.02
CTR9-204ENST00000529355 USP20Q9Y2K6 914 aa8.7□□□□□ -1.02
CTR9-204ENST00000529355 IVNS1ABPQ9Y6Y0 642 aa8.7□□□□□ -1.02
CTR9-204ENST00000529355 BNIP3LO60238 219 aa8.69□□□□□ -1.02
CTR9-204ENST00000529355 C11orf91Q3C1V1 193 aa8.69□□□□□ -1.02
CTR9-204ENST00000529355 GPAT2Q6NUI2 795 aa8.69□□□□□ -1.02
CTR9-204ENST00000529355 IFT43Q96FT9 208 aa8.69□□□□□ -1.02
CTR9-204ENST00000529355 DCDC2BA2VCK2 349 aa8.68□□□□□ -1.02
CTR9-204ENST00000529355 GRNP28799 593 aaKnown RBP8.68□□□□□ -1.02
CTR9-204ENST00000529355 ECM1Q16610 540 aa8.68□□□□□ -1.02
CTR9-204ENST00000529355 ATCAYQ86WG3 371 aa8.68□□□□□ -1.02
CTR9-204ENST00000529355 NANOS1Q8WY41 292 aaKnown RBP8.68□□□□□ -1.02
CTR9-204ENST00000529355 ABHD17AQ96GS6 310 aa8.68□□□□□ -1.02
CTR9-204ENST00000529355 NDFIP2Q9NV92 336 aa8.68□□□□□ -1.02
CTR9-204ENST00000529355 GAS6Q14393 721 aa8.67□□□□□ -1.02
CTR9-204ENST00000529355 EFHC2Q5JST6 749 aa8.67□□□□□ -1.02
CTR9-204ENST00000529355 RNFT1Q5M7Z0 435 aa8.67□□□□□ -1.02
CTR9-204ENST00000529355 SV2AQ7L0J3 742 aa8.67□□□□□ -1.02
CTR9-204ENST00000529355 HELQQ8TDG4 1101 aa8.67□□□□□ -1.02
CTR9-204ENST00000529355 GJA3Q9Y6H8 435 aa8.67□□□□□ -1.02
CTR9-204ENST00000529355 H7C1W4 665 aa8.66□□□□□ -1.02
CTR9-204ENST00000529355 OPLAHO14841 1288 aa8.66□□□□□ -1.02
CTR9-204ENST00000529355 ATXN7O15265 892 aaPredicted RBP8.66□□□□□ -1.02
CTR9-204ENST00000529355 MPSTP25325 297 aa8.66□□□□□ -1.02
CTR9-204ENST00000529355 KRT76Q01546 638 aa8.66□□□□□ -1.02
CTR9-204ENST00000529355 SFSWAPQ12872 951 aaKnown RBP8.66□□□□□ -1.02
CTR9-204ENST00000529355 BTLAQ7Z6A9 289 aa8.66□□□□□ -1.02
CTR9-204ENST00000529355 NLRP8Q86W28 1048 aa8.66□□□□□ -1.02
CTR9-204ENST00000529355 NEUROD4Q9HD90 331 aa8.66□□□□□ -1.02
CTR9-204ENST00000529355 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.66□□□□□ -1.02
CTR9-204ENST00000529355 KHNYNO15037 678 aaKnown RBP8.65□□□□□ -1.02
CTR9-204ENST00000529355 MICAL2O94851 1124 aa8.65□□□□□ -1.02
CTR9-204ENST00000529355 TNP2Q05952 138 aa8.65□□□□□ -1.02
CTR9-204ENST00000529355 B4GALNT3Q6L9W6 998 aa8.65□□□□□ -1.02
CTR9-204ENST00000529355 TREML1Q86YW5 311 aa8.65□□□□□ -1.02
CTR9-204ENST00000529355 CEP63Q96MT8 703 aa8.65□□□□□ -1.02
CTR9-204ENST00000529355 STIM2Q9P246 746 aa8.65□□□□□ -1.02
CTR9-204ENST00000529355 PCDHGC4Q9Y5F7 938 aa8.65□□□□□ -1.02
CTR9-204ENST00000529355 TGFBR3LH3BV60 316 aa8.64□□□□□ -1.03
CTR9-204ENST00000529355 MAPTP10636 758 aaKnown RBP8.64□□□□□ -1.03
CTR9-204ENST00000529355 IDH3AP50213 366 aa8.64□□□□□ -1.03
CTR9-204ENST00000529355 CTBSQ01459 385 aa8.64□□□□□ -1.03
CTR9-204ENST00000529355 TYRO3Q06418 890 aa8.64□□□□□ -1.03
CTR9-204ENST00000529355 PSMG3-AS1Q96PY0 264 aa8.64□□□□□ -1.03
CTR9-204ENST00000529355 GNEQ9Y223 722 aaKnown RBP8.64□□□□□ -1.03
CTR9-204ENST00000529355 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.63□□□□□ -1.03
CTR9-204ENST00000529355 H3BRB1 525 aa8.63□□□□□ -1.03
CTR9-204ENST00000529355 ICMTO60725 284 aa8.63□□□□□ -1.03
CTR9-204ENST00000529355 CD33P20138 364 aa8.63□□□□□ -1.03
CTR9-204ENST00000529355 BRD2P25440 801 aaKnown RBP8.63□□□□□ -1.03
CTR9-204ENST00000529355 KCNA1Q09470 495 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms