RNA–Protein interactions for RNA: ENST00000529201.1

SNRNP35-205, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-205ENST00000529201 TMPOP42166 694 aaKnown RBP17.72■□□□□ 0.43
SNRNP35-205ENST00000529201 NBPF26B4DH59 902 aa17.71■□□□□ 0.43
SNRNP35-205ENST00000529201 NBPF10Q6P3W6 841 aaKnown RBP17.71■□□□□ 0.43
SNRNP35-205ENST00000529201 NBPF15Q8N660 670 aa17.71■□□□□ 0.43
SNRNP35-205ENST00000529201 TTLL6Q8N841 843 aa17.71■□□□□ 0.43
SNRNP35-205ENST00000529201 RUNDC1Q96C34 613 aa17.71■□□□□ 0.43
SNRNP35-205ENST00000529201 ST5P78524 1137 aa17.7■□□□□ 0.42
SNRNP35-205ENST00000529201 PRR5LQ6MZQ0 368 aa17.7■□□□□ 0.42
SNRNP35-205ENST00000529201 C2CD5Q86YS7 1000 aa17.7■□□□□ 0.42
SNRNP35-205ENST00000529201 CNBD1Q8NA66 436 aa17.7■□□□□ 0.42
SNRNP35-205ENST00000529201 THUMPD2Q9BTF0 503 aaKnown RBP17.7■□□□□ 0.42
SNRNP35-205ENST00000529201 ERBB4Q15303 1308 aa17.7■□□□□ 0.42
SNRNP35-205ENST00000529201 NPHP1O15259 732 aa17.69■□□□□ 0.42
SNRNP35-205ENST00000529201 PIP4K2AP48426 406 aaPredicted RBP17.69■□□□□ 0.42
SNRNP35-205ENST00000529201 TSPYL4Q9UJ04 414 aa17.69■□□□□ 0.42
SNRNP35-205ENST00000529201 ERVV-1B6SEH8 477 aa17.68■□□□□ 0.42
SNRNP35-205ENST00000529201 ANKRD31Q8N7Z5 1873 aa17.68■□□□□ 0.42
SNRNP35-205ENST00000529201 TPTE2Q6XPS3 522 aa17.67■□□□□ 0.42
SNRNP35-205ENST00000529201 ADAMTS8Q9UP79 889 aa17.67■□□□□ 0.42
SNRNP35-205ENST00000529201 NBPF5PQ86XG9 351 aaPredicted RBP17.66■□□□□ 0.42
SNRNP35-205ENST00000529201 SBF1O95248 1867 aa17.65■□□□□ 0.42
SNRNP35-205ENST00000529201 C9orf131Q5VYM1 1079 aa17.65■□□□□ 0.42
SNRNP35-205ENST00000529201 CCDC146Q8IYE0 955 aa17.65■□□□□ 0.42
SNRNP35-205ENST00000529201 NIP7Q9Y221 180 aaKnown RBP eCLIP17.65■□□□□ 0.42
SNRNP35-205ENST00000529201 ZC3H4Q9UPT8 1303 aaKnown RBP17.65■□□□□ 0.42
SNRNP35-205ENST00000529201 STYK1Q6J9G0 422 aa17.64■□□□□ 0.41
SNRNP35-205ENST00000529201 KIF6Q6ZMV9 814 aa17.64■□□□□ 0.41
SNRNP35-205ENST00000529201 ZNF526Q8TF50 670 aaPredicted RBP17.64■□□□□ 0.41
SNRNP35-205ENST00000529201 CNKSR1Q969H4 720 aa17.64■□□□□ 0.41
SNRNP35-205ENST00000529201 RRP7AQ9Y3A4 280 aaKnown RBP17.64■□□□□ 0.41
SNRNP35-205ENST00000529201 NUP98P52948 1817 aa17.63■□□□□ 0.41
SNRNP35-205ENST00000529201 CHL1O00533 1208 aa17.63■□□□□ 0.41
SNRNP35-205ENST00000529201 NEUROD2Q15784 382 aa17.63■□□□□ 0.41
SNRNP35-205ENST00000529201 ZNF622Q969S3 477 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNRNP35-205ENST00000529201 MASTLQ96GX5 879 aa17.63■□□□□ 0.41
SNRNP35-205ENST00000529201 RNF181Q9P0P0 153 aa17.63■□□□□ 0.41
SNRNP35-205ENST00000529201 MAP3K15Q6ZN16 1313 aa17.63■□□□□ 0.41
SNRNP35-205ENST00000529201 KLRG2A4D1S0 409 aaPredicted RBP17.62■□□□□ 0.41
SNRNP35-205ENST00000529201 SRGNP10124 158 aa17.62■□□□□ 0.41
SNRNP35-205ENST00000529201 LMNB1P20700 586 aa17.62■□□□□ 0.41
SNRNP35-205ENST00000529201 HLFQ16534 295 aa17.62■□□□□ 0.41
SNRNP35-205ENST00000529201 SOGA3Q5TF21 947 aa17.62■□□□□ 0.41
SNRNP35-205ENST00000529201 NYXQ9GZU5 481 aa17.62■□□□□ 0.41
SNRNP35-205ENST00000529201 TRIM35Q9UPQ4 493 aa17.62■□□□□ 0.41
SNRNP35-205ENST00000529201 COL11A2P13942 1736 aaPredicted RBP17.61■□□□□ 0.41
SNRNP35-205ENST00000529201 ARFGEF2Q9Y6D5 1785 aa17.61■□□□□ 0.41
SNRNP35-205ENST00000529201 MYL6BP14649 208 aa17.61■□□□□ 0.41
SNRNP35-205ENST00000529201 KDM2BQ8NHM5 1336 aa17.61■□□□□ 0.41
SNRNP35-205ENST00000529201 GTF2E1P29083 439 aaPredicted RBP17.6■□□□□ 0.41
SNRNP35-205ENST00000529201 CCDC24Q8N4L8 307 aa17.6■□□□□ 0.41
SNRNP35-205ENST00000529201 NGEFQ8N5V2 710 aa17.6■□□□□ 0.41
SNRNP35-205ENST00000529201 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
SNRNP35-205ENST00000529201 IBTKQ9P2D0 1353 aaPredicted RBP17.59■□□□□ 0.41
SNRNP35-205ENST00000529201 SENP3-EIF4A1A0A087X0R7 540 aa17.59■□□□□ 0.41
SNRNP35-205ENST00000529201 KIF3CO14782 793 aa17.59■□□□□ 0.41
SNRNP35-205ENST00000529201 ABCB7O75027 752 aa17.59■□□□□ 0.41
SNRNP35-205ENST00000529201 HOXB7P09629 217 aa17.59■□□□□ 0.41
SNRNP35-205ENST00000529201 NPR1P16066 1061 aa17.59■□□□□ 0.41
SNRNP35-205ENST00000529201 CALD1Q05682 793 aaKnown RBP17.59■□□□□ 0.41
SNRNP35-205ENST00000529201 GIGYF2Q6Y7W6 1299 aaKnown RBP17.59■□□□□ 0.41
SNRNP35-205ENST00000529201 TTLL7Q6ZT98 887 aa17.59■□□□□ 0.41
SNRNP35-205ENST00000529201 CFAP44Q96MT7 982 aa17.59■□□□□ 0.41
SNRNP35-205ENST00000529201 EIF2S2P20042 333 aaKnown RBP17.58■□□□□ 0.4
SNRNP35-205ENST00000529201 FER1L6Q2WGJ9 1857 aa17.58■□□□□ 0.4
SNRNP35-205ENST00000529201 LTBP3Q9NS15 1303 aa17.57■□□□□ 0.4
SNRNP35-205ENST00000529201 C21orf2O43822 256 aa17.57■□□□□ 0.4
SNRNP35-205ENST00000529201 TOMM70O94826 608 aa17.57■□□□□ 0.4
SNRNP35-205ENST00000529201 ALDH1B1P30837 517 aa17.57■□□□□ 0.4
SNRNP35-205ENST00000529201 PDIA6Q15084 440 aa17.57■□□□□ 0.4
SNRNP35-205ENST00000529201 PRPF40BQ6NWY9 871 aaKnown RBP17.57■□□□□ 0.4
SNRNP35-205ENST00000529201 ZNF34Q8IZ26 560 aa17.57■□□□□ 0.4
SNRNP35-205ENST00000529201 CCDC88AQ3V6T2 1871 aa17.56■□□□□ 0.4
SNRNP35-205ENST00000529201 RIC1Q4ADV7 1423 aa17.56■□□□□ 0.4
SNRNP35-205ENST00000529201 ZNF316A6NFI3 1004 aaPredicted RBP17.56■□□□□ 0.4
SNRNP35-205ENST00000529201 NFKBIEO00221 500 aa17.56■□□□□ 0.4
SNRNP35-205ENST00000529201 RASSF7Q02833 373 aa17.56■□□□□ 0.4
SNRNP35-205ENST00000529201 PARP10Q53GL7 1025 aa17.56■□□□□ 0.4
SNRNP35-205ENST00000529201 LRP10Q7Z4F1 713 aa17.56■□□□□ 0.4
SNRNP35-205ENST00000529201 PPP1R42Q7Z4L9 355 aa17.56■□□□□ 0.4
SNRNP35-205ENST00000529201 ZBTB3Q9H5J0 574 aa17.56■□□□□ 0.4
SNRNP35-205ENST00000529201 DDX21Q9NR30 783 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNRNP35-205ENST00000529201 LAS1LQ9Y4W2 734 aaKnown RBP17.56■□□□□ 0.4
SNRNP35-205ENST00000529201 SLX4Q8IY92 1834 aa17.56■□□□□ 0.4
SNRNP35-205ENST00000529201 TNRC6CQ9HCJ0 1690 aaKnown RBP17.55■□□□□ 0.4
SNRNP35-205ENST00000529201 DICER1Q9UPY3 1922 aaKnown RBP17.55■□□□□ 0.4
SNRNP35-205ENST00000529201 APAF1O14727 1248 aa17.55■□□□□ 0.4
SNRNP35-205ENST00000529201 HSP90AB3PQ58FF7 597 aa17.55■□□□□ 0.4
SNRNP35-205ENST00000529201 CACNA1SQ13698 1873 aa17.54■□□□□ 0.4
SNRNP35-205ENST00000529201 RNF123Q5XPI4 1314 aa17.54■□□□□ 0.4
SNRNP35-205ENST00000529201 FAM177BA6PVY3 158 aa17.54■□□□□ 0.4
SNRNP35-205ENST00000529201 GNAI1P63096 354 aa17.54■□□□□ 0.4
SNRNP35-205ENST00000529201 CHMP4AQ9BY43 222 aa17.54■□□□□ 0.4
SNRNP35-205ENST00000529201 TAOK3Q9H2K8 898 aa17.54■□□□□ 0.4
SNRNP35-205ENST00000529201 GLTPD2A6NH11 291 aa17.53■□□□□ 0.4
SNRNP35-205ENST00000529201 ZNF853P0CG23 659 aa17.53■□□□□ 0.4
SNRNP35-205ENST00000529201 CRY2Q49AN0 593 aa17.53■□□□□ 0.4
SNRNP35-205ENST00000529201 C16orf71Q8IYS4 520 aaPredicted RBP17.53■□□□□ 0.4
SNRNP35-205ENST00000529201 C7orf43Q8WVR3 580 aa17.53■□□□□ 0.4
SNRNP35-205ENST00000529201 NMRK2Q9NPI5 230 aa17.53■□□□□ 0.4
SNRNP35-205ENST00000529201 IFT57Q9NWB7 429 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms