RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 LIMCH1Q9UPQ0 1083 aa11.8□□□□□ -0.52
SF3B2-206ENST00000528302 PTGS1P23219 599 aa11.8□□□□□ -0.52
SF3B2-206ENST00000528302 EDC3Q96F86 508 aaKnown RBP11.8□□□□□ -0.52
SF3B2-206ENST00000528302 C16orf45Q96MC5 204 aaPredicted RBP11.8□□□□□ -0.52
SF3B2-206ENST00000528302 LGR6Q9HBX8 967 aa11.8□□□□□ -0.52
SF3B2-206ENST00000528302 GNAT3A8MTJ3 354 aa11.8□□□□□ -0.52
SF3B2-206ENST00000528302 NPHP1O15259 732 aa11.8□□□□□ -0.52
SF3B2-206ENST00000528302 NAA30Q147X3 362 aaPredicted RBP11.8□□□□□ -0.52
SF3B2-206ENST00000528302 CNTROBQ8N137 903 aa11.8□□□□□ -0.52
SF3B2-206ENST00000528302 FAM227BQ96M60 508 aa11.8□□□□□ -0.52
SF3B2-206ENST00000528302 ATP7BP35670 1465 aa11.8□□□□□ -0.52
SF3B2-206ENST00000528302 RPAP1Q9BWH6 1393 aaPredicted RBP11.79□□□□□ -0.52
SF3B2-206ENST00000528302 SGSM2O43147 1006 aa11.79□□□□□ -0.52
SF3B2-206ENST00000528302 CHGBP05060 677 aa11.79□□□□□ -0.52
SF3B2-206ENST00000528302 CWF19L2Q2TBE0 894 aaKnown RBP11.79□□□□□ -0.52
SF3B2-206ENST00000528302 LRRC2Q9BYS8 371 aa11.79□□□□□ -0.52
SF3B2-206ENST00000528302 BOLA2Q9H3K6 86 aa11.79□□□□□ -0.52
SF3B2-206ENST00000528302 C9orf78Q9NZ63 289 aaPredicted RBP11.79□□□□□ -0.52
SF3B2-206ENST00000528302 NRBP1Q9UHY1 535 aa11.79□□□□□ -0.52
SF3B2-206ENST00000528302 TAF6LQ9Y6J9 622 aa11.79□□□□□ -0.52
SF3B2-206ENST00000528302 CDK12Q9NYV4 1490 aaPredicted RBP11.79□□□□□ -0.52
SF3B2-206ENST00000528302 LIG1P18858 919 aa11.79□□□□□ -0.52
SF3B2-206ENST00000528302 PIP4K2AP48426 406 aaPredicted RBP11.79□□□□□ -0.52
SF3B2-206ENST00000528302 LARP1BQ659C4 914 aaKnown RBP11.79□□□□□ -0.52
SF3B2-206ENST00000528302 MPRIPQ6WCQ1 1025 aa11.79□□□□□ -0.52
SF3B2-206ENST00000528302 ZNF710Q8N1W2 664 aa11.79□□□□□ -0.52
SF3B2-206ENST00000528302 KDM4AO75164 1064 aa11.78□□□□□ -0.52
SF3B2-206ENST00000528302 ERCC4Q92889 916 aaPredicted RBP11.78□□□□□ -0.52
SF3B2-206ENST00000528302 INTS4Q96HW7 963 aaKnown RBP11.78□□□□□ -0.52
SF3B2-206ENST00000528302 PTPRUQ92729 1446 aa11.78□□□□□ -0.52
SF3B2-206ENST00000528302 PRAMEF22A3QJZ6 481 aa11.78□□□□□ -0.52
SF3B2-206ENST00000528302 IFIT2P09913 472 aaKnown RBP11.78□□□□□ -0.52
SF3B2-206ENST00000528302 UBE2HP62256 183 aa11.78□□□□□ -0.52
SF3B2-206ENST00000528302 CDC37L1Q7L3B6 337 aa11.78□□□□□ -0.52
SF3B2-206ENST00000528302 AACSQ86V21 672 aa11.78□□□□□ -0.52
SF3B2-206ENST00000528302 PI4K2BQ8TCG2 481 aa11.78□□□□□ -0.52
SF3B2-206ENST00000528302 SALL3Q9BXA9 1300 aa11.78□□□□□ -0.52
SF3B2-206ENST00000528302 U2AF2P26368 475 aaKnown RBP eCLIP11.78□□□□□ -0.523e-7■■□□□ 11.6
SF3B2-206ENST00000528302 ME3Q16798 604 aa11.78□□□□□ -0.52
SF3B2-206ENST00000528302 ESCO1Q5FWF5 840 aa11.78□□□□□ -0.52
SF3B2-206ENST00000528302 PIBF1Q8WXW3 757 aa11.78□□□□□ -0.52
SF3B2-206ENST00000528302 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.78□□□□□ -0.526e-6■■■■■ 27.5
SF3B2-206ENST00000528302 KIF3AQ9Y496 699 aa11.78□□□□□ -0.52
SF3B2-206ENST00000528302 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.78□□□□□ -0.52
SF3B2-206ENST00000528302 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.78□□□□□ -0.52
SF3B2-206ENST00000528302 V9GYY5 206 aaPredicted RBP11.78□□□□□ -0.52
SF3B2-206ENST00000528302 NRXN3Q9Y4C0 1643 aa11.78□□□□□ -0.52
SF3B2-206ENST00000528302 SPATA31D1Q6ZQQ2 1576 aa11.77□□□□□ -0.52
SF3B2-206ENST00000528302 RIMS1Q86UR5 1692 aaKnown RBP11.77□□□□□ -0.52
SF3B2-206ENST00000528302 CRB1P82279 1406 aa11.77□□□□□ -0.52
SF3B2-206ENST00000528302 ADAMTS13Q76LX8 1427 aa11.77□□□□□ -0.52
SF3B2-206ENST00000528302 RAB11FIP3O75154 756 aa11.77□□□□□ -0.52
SF3B2-206ENST00000528302 ATP2B3Q16720 1220 aa11.77□□□□□ -0.52
SF3B2-206ENST00000528302 LRRC59Q96AG4 307 aaKnown RBP11.77□□□□□ -0.52
SF3B2-206ENST00000528302 LSG1Q9H089 658 aaKnown RBP11.77□□□□□ -0.52
SF3B2-206ENST00000528302 RIOK3O14730 519 aaKnown RBP11.77□□□□□ -0.53
SF3B2-206ENST00000528302 ANAPC15P60006 121 aa11.77□□□□□ -0.53
SF3B2-206ENST00000528302 MYRIPQ8NFW9 859 aa11.77□□□□□ -0.53
SF3B2-206ENST00000528302 BCL2L12Q9HB09 334 aa11.77□□□□□ -0.53
SF3B2-206ENST00000528302 RAD50Q92878 1312 aa11.77□□□□□ -0.53
SF3B2-206ENST00000528302 MCM5P33992 734 aa11.77□□□□□ -0.53
SF3B2-206ENST00000528302 CCDC186Q7Z3E2 898 aa11.77□□□□□ -0.53
SF3B2-206ENST00000528302 BICD2Q8TD16 824 aa11.77□□□□□ -0.53
SF3B2-206ENST00000528302 TRIM5Q9C035 493 aa11.77□□□□□ -0.53
SF3B2-206ENST00000528302 KCNF1Q9H3M0 494 aa11.77□□□□□ -0.53
SF3B2-206ENST00000528302 KIF24Q5T7B8 1368 aa11.77□□□□□ -0.53
SF3B2-206ENST00000528302 AATKQ6ZMQ8 1374 aa11.77□□□□□ -0.53
SF3B2-206ENST00000528302 KIAA0232Q92628 1395 aa11.77□□□□□ -0.53
SF3B2-206ENST00000528302 CLASRPQ8N2M8 674 aaKnown RBP11.76□□□□□ -0.53
SF3B2-206ENST00000528302 SYTL4Q96C24 671 aaPredicted RBP11.76□□□□□ -0.53
SF3B2-206ENST00000528302 KIF1BPQ96EK5 621 aa11.76□□□□□ -0.53
SF3B2-206ENST00000528302 DACT1Q9NYF0 836 aa11.76□□□□□ -0.53
SF3B2-206ENST00000528302 MTMR6Q9Y217 621 aa11.76□□□□□ -0.53
SF3B2-206ENST00000528302 CYP46A1Q9Y6A2 500 aa11.76□□□□□ -0.53
SF3B2-206ENST00000528302 ANKRD26Q9UPS8 1709 aa11.76□□□□□ -0.53
SF3B2-206ENST00000528302 TTC6Q86TZ1 520 aa11.76□□□□□ -0.53
SF3B2-206ENST00000528302 TPCN1Q9ULQ1 816 aa11.76□□□□□ -0.53
SF3B2-206ENST00000528302 ZFP91Q96JP5 570 aaPredicted RBP11.75□□□□□ -0.53
SF3B2-206ENST00000528302 MAP7D2Q96T17 732 aa11.75□□□□□ -0.53
SF3B2-206ENST00000528302 HYPKQ9NX55 129 aa11.75□□□□□ -0.53
SF3B2-206ENST00000528302 TLR7Q9NYK1 1049 aaKnown RBP11.75□□□□□ -0.53
SF3B2-206ENST00000528302 CHAF1AQ13111 956 aaPredicted RBP11.75□□□□□ -0.53
SF3B2-206ENST00000528302 PROSER3Q2NL68 480 aa11.75□□□□□ -0.53
SF3B2-206ENST00000528302 ANO6Q4KMQ2 910 aa11.75□□□□□ -0.53
SF3B2-206ENST00000528302 RBM8AQ9Y5S9 174 aaKnown RBP11.75□□□□□ -0.53
SF3B2-206ENST00000528302 RGPD8O14715 1765 aaPredicted RBP11.75□□□□□ -0.53
SF3B2-206ENST00000528302 DLC1Q96QB1 1528 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.74□□□□□ -0.53
SF3B2-206ENST00000528302 USP6P35125 1406 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 GUCY1B3Q02153 619 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 DNAAF4Q8WXU2 420 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 TTC14Q96N46 770 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 FSD1Q9BTV5 496 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 STAP2Q9UGK3 403 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 PRDM4Q9UKN5 801 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 JAK2O60674 1132 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 CCDC192P0DO97 292 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 ZKSCAN1P17029 563 aaPredicted RBP11.74□□□□□ -0.53
SF3B2-206ENST00000528302 TEFQ10587 303 aa11.74□□□□□ -0.53
SF3B2-206ENST00000528302 SLFNL1Q499Z3 407 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms