RNA–Protein interactions for RNA: ENST00000527421.5

UBXN1-208, Transcript of UBX domain protein 1, humanhuman

TSL 5

Gene UBXN1, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-208ENST00000527421 PIM2Q9P1W9 311 aa24.32■■□□□ 1.48
UBXN1-208ENST00000527421 NUP98P52948 1817 aa24.31■■□□□ 1.48
UBXN1-208ENST00000527421 NPHP1O15259 732 aa24.31■■□□□ 1.48
UBXN1-208ENST00000527421 KCNA3P22001 575 aa24.31■■□□□ 1.48
UBXN1-208ENST00000527421 CNBD1Q8NA66 436 aa24.31■■□□□ 1.48
UBXN1-208ENST00000527421 IFT57Q9NWB7 429 aa24.31■■□□□ 1.48
UBXN1-208ENST00000527421 KRT24Q2M2I5 525 aa24.3■■□□□ 1.48
UBXN1-208ENST00000527421 PRR5LQ6MZQ0 368 aa24.3■■□□□ 1.48
UBXN1-208ENST00000527421 MBIPQ9NS73 344 aa24.3■■□□□ 1.48
UBXN1-208ENST00000527421 MAP3K15Q6ZN16 1313 aa24.3■■□□□ 1.48
UBXN1-208ENST00000527421 GNAI1P63096 354 aa24.29■■□□□ 1.48
UBXN1-208ENST00000527421 NIP7Q9Y221 180 aaKnown RBP eCLIP24.29■■□□□ 1.48
UBXN1-208ENST00000527421 ERVV-1B6SEH8 477 aa24.28■■□□□ 1.48
UBXN1-208ENST00000527421 HOXB7P09629 217 aa24.28■■□□□ 1.48
UBXN1-208ENST00000527421 ZNF853P0CG23 659 aa24.28■■□□□ 1.48
UBXN1-208ENST00000527421 HLFQ16534 295 aa24.28■■□□□ 1.48
UBXN1-208ENST00000527421 DALRD3Q5D0E6 543 aaKnown RBP24.28■■□□□ 1.48
UBXN1-208ENST00000527421 TTLL7Q6ZT98 887 aa24.28■■□□□ 1.48
UBXN1-208ENST00000527421 COL11A2P13942 1736 aaPredicted RBP24.27■■□□□ 1.48
UBXN1-208ENST00000527421 ST5P78524 1137 aa24.27■■□□□ 1.48
UBXN1-208ENST00000527421 NBPF5PQ86XG9 351 aaPredicted RBP24.27■■□□□ 1.48
UBXN1-208ENST00000527421 C2CD5Q86YS7 1000 aa24.27■■□□□ 1.48
UBXN1-208ENST00000527421 NECTIN2Q92692 538 aa24.27■■□□□ 1.48
UBXN1-208ENST00000527421 ATP10DQ9P241 1426 aa24.27■■□□□ 1.48
UBXN1-208ENST00000527421 PDIA6Q15084 440 aa24.26■■□□□ 1.47
UBXN1-208ENST00000527421 CCDC27Q2M243 656 aa24.26■■□□□ 1.47
UBXN1-208ENST00000527421 PROSER3Q2NL68 480 aa24.26■■□□□ 1.47
UBXN1-208ENST00000527421 BRIP1Q9BX63 1249 aa24.26■■□□□ 1.47
UBXN1-208ENST00000527421 ZBTB3Q9H5J0 574 aa24.26■■□□□ 1.47
UBXN1-208ENST00000527421 H0YIN7 160 aa24.25■■□□□ 1.47
UBXN1-208ENST00000527421 ANXA1P04083 346 aa24.25■■□□□ 1.47
UBXN1-208ENST00000527421 PDE6BP35913 854 aa24.25■■□□□ 1.47
UBXN1-208ENST00000527421 HDGFL1Q5TGJ6 251 aa24.25■■□□□ 1.47
UBXN1-208ENST00000527421 LRP10Q7Z4F1 713 aa24.25■■□□□ 1.47
UBXN1-208ENST00000527421 CCDC24Q8N4L8 307 aa24.25■■□□□ 1.47
UBXN1-208ENST00000527421 PDZRN3Q9UPQ7 1066 aa24.25■■□□□ 1.47
UBXN1-208ENST00000527421 DUSP27Q5VZP5 1158 aa24.24■■□□□ 1.47
UBXN1-208ENST00000527421 DDX21Q9NR30 783 aaKnown RBP eCLIP24.23■■□□□ 1.47
UBXN1-208ENST00000527421 NCBP3Q53F19 620 aaKnown RBP24.22■■□□□ 1.47
UBXN1-208ENST00000527421 TPTE2Q6XPS3 522 aa24.22■■□□□ 1.47
UBXN1-208ENST00000527421 WWC1Q8IX03 1113 aa24.22■■□□□ 1.47
UBXN1-208ENST00000527421 CHPF2Q9P2E5 772 aa24.22■■□□□ 1.47
UBXN1-208ENST00000527421 ARHGAP27Q6ZUM4 889 aa24.21■■□□□ 1.47
UBXN1-208ENST00000527421 FAM9BQ8IZU0 186 aa24.21■■□□□ 1.47
UBXN1-208ENST00000527421 ANKRD36CQ5JPF3 1778 aa24.21■■□□□ 1.47
UBXN1-208ENST00000527421 FAM177BA6PVY3 158 aa24.2■■□□□ 1.46
UBXN1-208ENST00000527421 GIGYF2Q6Y7W6 1299 aaKnown RBP24.2■■□□□ 1.46
UBXN1-208ENST00000527421 TTLL6Q8N841 843 aa24.2■■□□□ 1.46
UBXN1-208ENST00000527421 XAGE3Q8WTP9 111 aa24.2■■□□□ 1.46
UBXN1-208ENST00000527421 ADCY9O60503 1353 aa24.19■■□□□ 1.46
UBXN1-208ENST00000527421 IBTKQ9P2D0 1353 aaPredicted RBP24.19■■□□□ 1.46
UBXN1-208ENST00000527421 GPTP24298 496 aa24.19■■□□□ 1.46
UBXN1-208ENST00000527421 COPS6Q7L5N1 327 aa24.19■■□□□ 1.46
UBXN1-208ENST00000527421 NYXQ9GZU5 481 aa24.19■■□□□ 1.46
UBXN1-208ENST00000527421 DBF4Q9UBU7 674 aaPredicted RBP24.19■■□□□ 1.46
UBXN1-208ENST00000527421 CACNA1SQ13698 1873 aa24.18■■□□□ 1.46
UBXN1-208ENST00000527421 GTF2E1P29083 439 aaPredicted RBP24.18■■□□□ 1.46
UBXN1-208ENST00000527421 AIMP1Q12904 312 aaKnown RBP24.18■■□□□ 1.46
UBXN1-208ENST00000527421 ZNF622Q969S3 477 aaKnown RBP eCLIP24.18■■□□□ 1.46
UBXN1-208ENST00000527421 ARFGEF2Q9Y6D5 1785 aa24.18■■□□□ 1.46
UBXN1-208ENST00000527421 IL16Q14005 1332 aa24.17■■□□□ 1.46
UBXN1-208ENST00000527421 UBN2Q6ZU65 1347 aa24.17■■□□□ 1.46
UBXN1-208ENST00000527421 TNRC6CQ9HCJ0 1690 aaKnown RBP24.16■■□□□ 1.46
UBXN1-208ENST00000527421 ELL2O00472 640 aaPredicted RBP24.16■■□□□ 1.46
UBXN1-208ENST00000527421 IFFO2Q5TF58 517 aa24.16■■□□□ 1.46
UBXN1-208ENST00000527421 ZNF34Q8IZ26 560 aa24.16■■□□□ 1.46
UBXN1-208ENST00000527421 STYK1Q6J9G0 422 aa24.15■■□□□ 1.46
UBXN1-208ENST00000527421 TSR2Q969E8 191 aaKnown RBP24.15■■□□□ 1.46
UBXN1-208ENST00000527421 HYPKQ9NX55 129 aa24.15■■□□□ 1.46
UBXN1-208ENST00000527421 SALL2Q9Y467 1007 aaPredicted RBP24.15■■□□□ 1.46
UBXN1-208ENST00000527421 ABCC12Q96J65 1359 aa24.15■■□□□ 1.46
UBXN1-208ENST00000527421 SRGNP10124 158 aa24.14■■□□□ 1.45
UBXN1-208ENST00000527421 PARP10Q53GL7 1025 aa24.14■■□□□ 1.45
UBXN1-208ENST00000527421 HSP90AB3PQ58FF7 597 aa24.14■■□□□ 1.45
UBXN1-208ENST00000527421 C8orf58Q8NAV2 365 aa24.14■■□□□ 1.45
UBXN1-208ENST00000527421 CNKSR1Q969H4 720 aa24.14■■□□□ 1.45
UBXN1-208ENST00000527421 MASTLQ96GX5 879 aa24.14■■□□□ 1.45
UBXN1-208ENST00000527421 NUTM1Q86Y26 1132 aa24.13■■□□□ 1.45
UBXN1-208ENST00000527421 CHMP4AQ9BY43 222 aa24.13■■□□□ 1.45
UBXN1-208ENST00000527421 RIC1Q4ADV7 1423 aa24.12■■□□□ 1.45
UBXN1-208ENST00000527421 SUSD4Q5VX71 490 aa24.12■■□□□ 1.45
UBXN1-208ENST00000527421 PPP1R42Q7Z4L9 355 aa24.12■■□□□ 1.45
UBXN1-208ENST00000527421 SLX4Q8IY92 1834 aa24.12■■□□□ 1.45
UBXN1-208ENST00000527421 SBF1O95248 1867 aa24.11■■□□□ 1.45
UBXN1-208ENST00000527421 CEP350Q5VT06 3117 aa24.11■■□□□ 1.45
UBXN1-208ENST00000527421 KLRG2A4D1S0 409 aaPredicted RBP24.11■■□□□ 1.45
UBXN1-208ENST00000527421 NTSR2O95665 410 aa24.11■■□□□ 1.45
UBXN1-208ENST00000527421 NPR1P16066 1061 aa24.11■■□□□ 1.45
UBXN1-208ENST00000527421 ERFEQ4G0M1 354 aa24.11■■□□□ 1.45
UBXN1-208ENST00000527421 WDR63Q8IWG1 891 aa24.11■■□□□ 1.45
UBXN1-208ENST00000527421 PLBD2Q8NHP8 589 aa24.11■■□□□ 1.45
UBXN1-208ENST00000527421 TSPYL6Q8N831 410 aa24.1■■□□□ 1.45
UBXN1-208ENST00000527421 TCIRG1Q13488 830 aa24.09■■□□□ 1.45
UBXN1-208ENST00000527421 CCDC30Q5VVM6 783 aa24.09■■□□□ 1.45
UBXN1-208ENST00000527421 PRPF40BQ6NWY9 871 aaKnown RBP24.09■■□□□ 1.45
UBXN1-208ENST00000527421 ANKRD13DQ6ZTN6 518 aa24.09■■□□□ 1.45
UBXN1-208ENST00000527421 UTP14AQ9BVJ6 771 aaKnown RBP24.09■■□□□ 1.45
UBXN1-208ENST00000527421 FANCIQ9NVI1 1328 aa24.09■■□□□ 1.45
UBXN1-208ENST00000527421 C9orf131Q5VYM1 1079 aa24.08■■□□□ 1.45
UBXN1-208ENST00000527421 ZNF219Q9P2Y4 722 aaPredicted RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms