RNA–Protein interactions for RNA: ENST00000527296.1

NPAT-202, Transcript of nuclear protein, coactivator of histone transcription, humanhuman

APPRIS ALT2 TSL 3

Gene NPAT, Length 898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAT-202ENST00000527296 POTEAQ6S8J7 498 aa11.32□□□□□ -0.6
NPAT-202ENST00000527296 TSEN34Q9BSV6 310 aaKnown RBP11.32□□□□□ -0.6
NPAT-202ENST00000527296 HIRIP3Q9BW71 556 aaPredicted RBP11.32□□□□□ -0.6
NPAT-202ENST00000527296 SMG6Q86US8 1419 aaKnown RBP11.32□□□□□ -0.6
NPAT-202ENST00000527296 WASHC2AQ641Q2 1341 aa11.32□□□□□ -0.6
NPAT-202ENST00000527296 CCDC7Q96M83 1385 aa11.31□□□□□ -0.6
NPAT-202ENST00000527296 PPP1R12BO60237 982 aaPredicted RBP11.31□□□□□ -0.6
NPAT-202ENST00000527296 SND1Q7KZF4 910 aaKnown RBP eCLIP11.31□□□□□ -0.6
NPAT-202ENST00000527296 LINC00528Q8N1L1 170 aa11.31□□□□□ -0.6
NPAT-202ENST00000527296 ZDHHC1Q8WTX9 485 aa11.31□□□□□ -0.6
NPAT-202ENST00000527296 CHMP7Q8WUX9 453 aaPredicted RBP11.31□□□□□ -0.6
NPAT-202ENST00000527296 COL26A1Q96A83 441 aa11.31□□□□□ -0.6
NPAT-202ENST00000527296 NLRP3Q96P20 1036 aa11.31□□□□□ -0.6
NPAT-202ENST00000527296 INSM2Q96T92 566 aaPredicted RBP11.31□□□□□ -0.6
NPAT-202ENST00000527296 C2orf49Q9BVC5 232 aaPredicted RBP11.31□□□□□ -0.6
NPAT-202ENST00000527296 MIA2Q96PC5 1412 aa11.31□□□□□ -0.6
NPAT-202ENST00000527296 FANCD2Q9BXW9 1451 aa11.31□□□□□ -0.6
NPAT-202ENST00000527296 DEKP35659 375 aaKnown RBP11.3□□□□□ -0.6
NPAT-202ENST00000527296 TMCO4Q5TGY1 634 aa11.3□□□□□ -0.6
NPAT-202ENST00000527296 STAG2Q8N3U4 1231 aa11.3□□□□□ -0.6
NPAT-202ENST00000527296 GRIP2Q9C0E4 1043 aa11.3□□□□□ -0.6
NPAT-202ENST00000527296 PTPRKQ15262 1439 aa11.29□□□□□ -0.6
NPAT-202ENST00000527296 SOWAHDA6NJG2 315 aa11.29□□□□□ -0.6
NPAT-202ENST00000527296 PSMA6P60900 246 aaKnown RBP11.29□□□□□ -0.6
NPAT-202ENST00000527296 SH3PXD2AQ5TCZ1 1133 aa11.29□□□□□ -0.6
NPAT-202ENST00000527296 FOXD4L5Q5VV16 416 aaPredicted RBP11.29□□□□□ -0.6
NPAT-202ENST00000527296 MRS2Q9HD23 443 aa11.29□□□□□ -0.6
NPAT-202ENST00000527296 DNMT3AQ9Y6K1 912 aaPredicted RBP11.29□□□□□ -0.6
NPAT-202ENST00000527296 PTCD1O75127 700 aaKnown RBP11.28□□□□□ -0.6
NPAT-202ENST00000527296 GPC1P35052 558 aa11.28□□□□□ -0.6
NPAT-202ENST00000527296 CTSOP43234 321 aaPredicted RBP11.28□□□□□ -0.6
NPAT-202ENST00000527296 RNF144AP50876 292 aaPredicted RBP11.28□□□□□ -0.6
NPAT-202ENST00000527296 GTF3C2Q8WUA4 911 aaPredicted RBP11.28□□□□□ -0.6
NPAT-202ENST00000527296 ZSCAN10Q96SZ4 725 aaPredicted RBP11.28□□□□□ -0.6
NPAT-202ENST00000527296 PRKRIP1Q9H875 184 aaPredicted RBP11.28□□□□□ -0.6
NPAT-202ENST00000527296 TOPBP1Q92547 1522 aa11.27□□□□□ -0.61
NPAT-202ENST00000527296 EML1O00423 815 aa11.27□□□□□ -0.61
NPAT-202ENST00000527296 ZNF211Q13398 564 aaPredicted RBP11.27□□□□□ -0.61
NPAT-202ENST00000527296 NAA30Q147X3 362 aaPredicted RBP11.27□□□□□ -0.61
NPAT-202ENST00000527296 TEAD4Q15561 434 aa11.27□□□□□ -0.61
NPAT-202ENST00000527296 SAP130Q9H0E3 1048 aa11.27□□□□□ -0.61
NPAT-202ENST00000527296 CCDC9Q9Y3X0 531 aaKnown RBP11.27□□□□□ -0.61
NPAT-202ENST00000527296 POLA1P09884 1462 aaPredicted RBP11.26□□□□□ -0.61
NPAT-202ENST00000527296 IRX6P78412 446 aaPredicted RBP11.26□□□□□ -0.61
NPAT-202ENST00000527296 ECM1Q16610 540 aa11.26□□□□□ -0.61
NPAT-202ENST00000527296 MRPL14Q6P1L8 145 aaKnown RBP11.26□□□□□ -0.61
NPAT-202ENST00000527296 TRIM46Q7Z4K8 759 aa11.26□□□□□ -0.61
NPAT-202ENST00000527296 NBPF15Q8N660 670 aa11.26□□□□□ -0.61
NPAT-202ENST00000527296 ANO2Q9NQ90 1003 aa11.26□□□□□ -0.61
NPAT-202ENST00000527296 EGFL7Q9UHF1 273 aa11.26□□□□□ -0.61
NPAT-202ENST00000527296 MTMR7Q9Y216 660 aa11.26□□□□□ -0.61
NPAT-202ENST00000527296 ARID4BQ4LE39 1312 aaPredicted RBP11.26□□□□□ -0.61
NPAT-202ENST00000527296 ROCK1Q13464 1354 aa11.26□□□□□ -0.61
NPAT-202ENST00000527296 RPRD2Q5VT52 1461 aaKnown RBP11.25□□□□□ -0.61
NPAT-202ENST00000527296 GFRA3O60609 400 aa11.25□□□□□ -0.61
NPAT-202ENST00000527296 ABL1P00519 1130 aa11.25□□□□□ -0.61
NPAT-202ENST00000527296 BMP1P13497 986 aa11.25□□□□□ -0.61
NPAT-202ENST00000527296 SMCPP49901 116 aaPredicted RBP11.25□□□□□ -0.61
NPAT-202ENST00000527296 MFAP1P55081 439 aaKnown RBP11.25□□□□□ -0.61
NPAT-202ENST00000527296 MTMR3Q13615 1198 aa11.25□□□□□ -0.61
NPAT-202ENST00000527296 PARP3Q9Y6F1 533 aa11.25□□□□□ -0.61
NPAT-202ENST00000527296 LRRIQ1Q96JM4 1722 aa11.24□□□□□ -0.61
NPAT-202ENST00000527296 NRG2O14511 850 aaPredicted RBP11.24□□□□□ -0.61
NPAT-202ENST00000527296 ICMTO60725 284 aa11.24□□□□□ -0.61
NPAT-202ENST00000527296 DGAT1O75907 488 aa11.24□□□□□ -0.61
NPAT-202ENST00000527296 NOS2P35228 1153 aa11.24□□□□□ -0.61
NPAT-202ENST00000527296 HIRAP54198 1017 aaPredicted RBP11.24□□□□□ -0.61
NPAT-202ENST00000527296 C6orf118Q5T5N4 469 aa11.24□□□□□ -0.61
NPAT-202ENST00000527296 QTRT2Q9H974 415 aaKnown RBP11.24□□□□□ -0.61
NPAT-202ENST00000527296 POLMQ9NP87 494 aaPredicted RBP11.24□□□□□ -0.61
NPAT-202ENST00000527296 CABP1Q9NZU7 370 aa11.24□□□□□ -0.61
NPAT-202ENST00000527296 ROCK2O75116 1388 aaKnown RBP11.24□□□□□ -0.61
NPAT-202ENST00000527296 SERTM1A2A2V5 107 aa11.23□□□□□ -0.61
NPAT-202ENST00000527296 BMP2P12643 396 aa11.23□□□□□ -0.61
NPAT-202ENST00000527296 TMEM214Q6NUQ4 689 aaKnown RBP11.23□□□□□ -0.61
NPAT-202ENST00000527296 RNF217Q8TC41 542 aa11.23□□□□□ -0.61
NPAT-202ENST00000527296 RHBDD1Q8TEB9 315 aa11.23□□□□□ -0.61
NPAT-202ENST00000527296 L3MBTL2Q969R5 705 aa11.23□□□□□ -0.61
NPAT-202ENST00000527296 IPO9Q96P70 1041 aaKnown RBP11.23□□□□□ -0.61
NPAT-202ENST00000527296 IRX2Q9BZI1 471 aaPredicted RBP11.23□□□□□ -0.61
NPAT-202ENST00000527296 NUDCQ9Y266 331 aa11.23□□□□□ -0.61
NPAT-202ENST00000527296 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
NPAT-202ENST00000527296 UPP2O95045 317 aa11.22□□□□□ -0.61
NPAT-202ENST00000527296 C4orf17Q53FE4 359 aa11.22□□□□□ -0.61
NPAT-202ENST00000527296 SLC27A3Q5K4L6 730 aa11.22□□□□□ -0.61
NPAT-202ENST00000527296 COX20Q5RI15 118 aa11.22□□□□□ -0.61
NPAT-202ENST00000527296 RNF123Q5XPI4 1314 aa11.22□□□□□ -0.61
NPAT-202ENST00000527296 TEX14Q8IWB6 1497 aa11.22□□□□□ -0.61
NPAT-202ENST00000527296 HELQQ8TDG4 1101 aa11.22□□□□□ -0.61
NPAT-202ENST00000527296 VTI1AQ96AJ9 217 aa11.22□□□□□ -0.61
NPAT-202ENST00000527296 NIFKQ9BYG3 293 aaKnown RBP11.22□□□□□ -0.61
NPAT-202ENST00000527296 SPATA31C2B4DYI2 1134 aa11.21□□□□□ -0.61
NPAT-202ENST00000527296 CTC1Q2NKJ3 1217 aa11.21□□□□□ -0.61
NPAT-202ENST00000527296 PKDCCQ504Y2 493 aa11.21□□□□□ -0.61
NPAT-202ENST00000527296 FAM9BQ8IZU0 186 aa11.21□□□□□ -0.61
NPAT-202ENST00000527296 CRIPAKQ8N1N5 446 aa11.21□□□□□ -0.61
NPAT-202ENST00000527296 CCDC136Q96JN2 1154 aa11.21□□□□□ -0.61
NPAT-202ENST00000527296 LRFN2Q9ULH4 789 aa11.21□□□□□ -0.61
NPAT-202ENST00000527296 HCN4Q9Y3Q4 1203 aa11.21□□□□□ -0.61
NPAT-202ENST00000527296 NESP48681 1621 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms