RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 TM4SF1P30408 202 aa16.71■□□□□ 0.27
CLP1-202ENST00000525602 COL11A2P13942 1736 aaPredicted RBP16.7■□□□□ 0.26
CLP1-202ENST00000525602 NBPF26B4DH59 902 aa16.7■□□□□ 0.26
CLP1-202ENST00000525602 NBPF10Q6P3W6 841 aaKnown RBP16.7■□□□□ 0.26
CLP1-202ENST00000525602 NBPF15Q8N660 670 aa16.7■□□□□ 0.26
CLP1-202ENST00000525602 ANKRD31Q8N7Z5 1873 aa16.7■□□□□ 0.26
CLP1-202ENST00000525602 PRELPP51888 382 aa16.69■□□□□ 0.26
CLP1-202ENST00000525602 NFIXQ14938 502 aa16.69■□□□□ 0.26
CLP1-202ENST00000525602 NPM2Q86SE8 214 aaKnown RBP16.69■□□□□ 0.26
CLP1-202ENST00000525602 TBC1D2BQ9UPU7 963 aa16.69■□□□□ 0.26
CLP1-202ENST00000525602 CHL1O00533 1208 aa16.68■□□□□ 0.26
CLP1-202ENST00000525602 CAMTA2O94983 1202 aa16.68■□□□□ 0.26
CLP1-202ENST00000525602 DZIP3Q86Y13 1208 aaKnown RBP16.68■□□□□ 0.26
CLP1-202ENST00000525602 RBM46Q8TBY0 533 aaKnown RBP16.68■□□□□ 0.26
CLP1-202ENST00000525602 RRAGCQ9HB90 399 aa16.68■□□□□ 0.26
CLP1-202ENST00000525602 C16orf71Q8IYS4 520 aaPredicted RBP16.67■□□□□ 0.26
CLP1-202ENST00000525602 LAS1LQ9Y4W2 734 aaKnown RBP16.67■□□□□ 0.26
CLP1-202ENST00000525602 CACNA1SQ13698 1873 aa16.66■□□□□ 0.26
CLP1-202ENST00000525602 KDM2BQ8NHM5 1336 aa16.66■□□□□ 0.26
CLP1-202ENST00000525602 TBC1D9BQ66K14 1250 aa16.65■□□□□ 0.26
CLP1-202ENST00000525602 CFAP44Q96MT7 982 aa16.65■□□□□ 0.26
CLP1-202ENST00000525602 BICDL1Q6ZP65 573 aa16.64■□□□□ 0.26
CLP1-202ENST00000525602 ERBB4Q15303 1308 aa16.64■□□□□ 0.25
CLP1-202ENST00000525602 SERPINB2P05120 415 aa16.64■□□□□ 0.25
CLP1-202ENST00000525602 ZNF853P0CG23 659 aa16.64■□□□□ 0.25
CLP1-202ENST00000525602 CALD1Q05682 793 aaKnown RBP16.64■□□□□ 0.25
CLP1-202ENST00000525602 KRT24Q2M2I5 525 aa16.64■□□□□ 0.25
CLP1-202ENST00000525602 CCDC24Q8N4L8 307 aa16.64■□□□□ 0.25
CLP1-202ENST00000525602 KLRG1Q96E93 195 aa16.64■□□□□ 0.25
CLP1-202ENST00000525602 IFT57Q9NWB7 429 aa16.64■□□□□ 0.25
CLP1-202ENST00000525602 MYL6BP14649 208 aa16.63■□□□□ 0.25
CLP1-202ENST00000525602 C2CD5Q86YS7 1000 aa16.63■□□□□ 0.25
CLP1-202ENST00000525602 MBIPQ9NS73 344 aa16.63■□□□□ 0.25
CLP1-202ENST00000525602 NFKBIEO00221 500 aa16.62■□□□□ 0.25
CLP1-202ENST00000525602 RGL2O15211 777 aa16.62■□□□□ 0.25
CLP1-202ENST00000525602 EIF2S2P20042 333 aaKnown RBP16.62■□□□□ 0.25
CLP1-202ENST00000525602 FSTL1Q12841 308 aa16.62■□□□□ 0.25
CLP1-202ENST00000525602 CCDC27Q2M243 656 aa16.62■□□□□ 0.25
CLP1-202ENST00000525602 CLEC4GQ6UXB4 293 aa16.62■□□□□ 0.25
CLP1-202ENST00000525602 ZNF652Q9Y2D9 606 aa16.62■□□□□ 0.25
CLP1-202ENST00000525602 GNAI1P63096 354 aa16.61■□□□□ 0.25
CLP1-202ENST00000525602 NGEFQ8N5V2 710 aa16.61■□□□□ 0.25
CLP1-202ENST00000525602 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
CLP1-202ENST00000525602 FER1L6Q2WGJ9 1857 aa16.6■□□□□ 0.25
CLP1-202ENST00000525602 PDIA6Q15084 440 aa16.6■□□□□ 0.25
CLP1-202ENST00000525602 TTLL7Q6ZT98 887 aa16.6■□□□□ 0.25
CLP1-202ENST00000525602 LRP10Q7Z4F1 713 aa16.6■□□□□ 0.25
CLP1-202ENST00000525602 FAM9BQ8IZU0 186 aa16.6■□□□□ 0.25
CLP1-202ENST00000525602 SETDB2Q96T68 719 aa16.6■□□□□ 0.25
CLP1-202ENST00000525602 HOXB7P09629 217 aa16.59■□□□□ 0.25
CLP1-202ENST00000525602 LMNB1P20700 586 aa16.59■□□□□ 0.25
CLP1-202ENST00000525602 HLFQ16534 295 aa16.59■□□□□ 0.25
CLP1-202ENST00000525602 PROSER3Q2NL68 480 aa16.59■□□□□ 0.25
CLP1-202ENST00000525602 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
CLP1-202ENST00000525602 COL13A1Q5TAT6 717 aaPredicted RBP16.59■□□□□ 0.25
CLP1-202ENST00000525602 KIF6Q6ZMV9 814 aa16.59■□□□□ 0.25
CLP1-202ENST00000525602 WWC1Q8IX03 1113 aa16.59■□□□□ 0.25
CLP1-202ENST00000525602 TTLL6Q8N841 843 aa16.59■□□□□ 0.25
CLP1-202ENST00000525602 NECTIN2Q92692 538 aa16.59■□□□□ 0.25
CLP1-202ENST00000525602 DICER1Q9UPY3 1922 aaKnown RBP16.59■□□□□ 0.25
CLP1-202ENST00000525602 MAP3K15Q6ZN16 1313 aa16.59■□□□□ 0.25
CLP1-202ENST00000525602 NUP98P52948 1817 aa16.58■□□□□ 0.25
CLP1-202ENST00000525602 ANXA1P04083 346 aa16.58■□□□□ 0.24
CLP1-202ENST00000525602 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.24
CLP1-202ENST00000525602 SMC1BQ8NDV3 1235 aa16.58■□□□□ 0.24
CLP1-202ENST00000525602 SLX4Q8IY92 1834 aa16.58■□□□□ 0.24
CLP1-202ENST00000525602 ERVV-1B6SEH8 477 aa16.57■□□□□ 0.24
CLP1-202ENST00000525602 HDGFL1Q5TGJ6 251 aa16.57■□□□□ 0.24
CLP1-202ENST00000525602 DUSP27Q5VZP5 1158 aa16.57■□□□□ 0.24
CLP1-202ENST00000525602 JMYQ8N9B5 988 aa16.57■□□□□ 0.24
CLP1-202ENST00000525602 NIP7Q9Y221 180 aaKnown RBP eCLIP16.57■□□□□ 0.24
CLP1-202ENST00000525602 H0YIN7 160 aa16.56■□□□□ 0.24
CLP1-202ENST00000525602 CNBD1Q8NA66 436 aa16.56■□□□□ 0.24
CLP1-202ENST00000525602 ZBTB3Q9H5J0 574 aa16.56■□□□□ 0.24
CLP1-202ENST00000525602 DDX21Q9NR30 783 aaKnown RBP eCLIP16.56■□□□□ 0.24
CLP1-202ENST00000525602 ZC3H4Q9UPT8 1303 aaKnown RBP16.56■□□□□ 0.24
CLP1-202ENST00000525602 GLTPD2A6NH11 291 aa16.55■□□□□ 0.24
CLP1-202ENST00000525602 IL16Q14005 1332 aa16.55■□□□□ 0.24
CLP1-202ENST00000525602 ZNF622Q969S3 477 aaKnown RBP eCLIP16.55■□□□□ 0.24
CLP1-202ENST00000525602 CHPF2Q9P2E5 772 aa16.55■□□□□ 0.24
CLP1-202ENST00000525602 ARFGEF2Q9Y6D5 1785 aa16.55■□□□□ 0.24
CLP1-202ENST00000525602 POTECB2RU33 542 aa16.54■□□□□ 0.24
CLP1-202ENST00000525602 NPHP1O15259 732 aa16.54■□□□□ 0.24
CLP1-202ENST00000525602 C21orf2O43822 256 aa16.54■□□□□ 0.24
CLP1-202ENST00000525602 CAPN15O75808 1086 aa16.54■□□□□ 0.24
CLP1-202ENST00000525602 ST5P78524 1137 aa16.54■□□□□ 0.24
CLP1-202ENST00000525602 NBPF5PQ86XG9 351 aaPredicted RBP16.54■□□□□ 0.24
CLP1-202ENST00000525602 BRIP1Q9BX63 1249 aa16.54■□□□□ 0.24
CLP1-202ENST00000525602 SALL2Q9Y467 1007 aaPredicted RBP16.54■□□□□ 0.24
CLP1-202ENST00000525602 VEGFAP15692 232 aaPredicted RBP16.53■□□□□ 0.24
CLP1-202ENST00000525602 XAGE3Q8WTP9 111 aa16.53■□□□□ 0.24
CLP1-202ENST00000525602 TSR2Q969E8 191 aaKnown RBP16.53■□□□□ 0.24
CLP1-202ENST00000525602 ANKRD36CQ5JPF3 1778 aa16.53■□□□□ 0.24
CLP1-202ENST00000525602 PDE6BP35913 854 aa16.52■□□□□ 0.24
CLP1-202ENST00000525602 GIGYF2Q6Y7W6 1299 aaKnown RBP16.52■□□□□ 0.24
CLP1-202ENST00000525602 COPS6Q7L5N1 327 aa16.52■□□□□ 0.24
CLP1-202ENST00000525602 C8orf58Q8NAV2 365 aa16.52■□□□□ 0.24
CLP1-202ENST00000525602 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.24
CLP1-202ENST00000525602 UBN2Q6ZU65 1347 aa16.52■□□□□ 0.23
CLP1-202ENST00000525602 FAM177BA6PVY3 158 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms