RNA–Protein interactions for RNA: ENST00000525508.1

CHD7-203, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 5 BASIC

Gene CHD7, Length 4,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-203ENST00000525508 MAP3K1Q13233 1512 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 RFC4P35249 363 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 CCDC173Q0VFZ6 552 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 MAP3K11Q16584 847 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 NBPF6Q5VWK0 638 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 NBPF5PQ86XG9 351 aaPredicted RBP9.72□□□□□ -0.85
CHD7-203ENST00000525508 IQCA1Q86XH1 822 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 NBPF4Q96M43 638 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 RBM27Q9P2N5 1060 aaKnown RBP9.72□□□□□ -0.85
CHD7-203ENST00000525508 USP16Q9Y5T5 823 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 ANKRD36BQ8N2N9 1353 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 TTC22Q5TAA0 569 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 MTERF4Q7Z6M4 381 aaKnown RBP9.72□□□□□ -0.85
CHD7-203ENST00000525508 EVI5LQ96CN4 794 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 SEPT11Q9NVA2 429 aaKnown RBP9.72□□□□□ -0.85
CHD7-203ENST00000525508 PDE1AP54750 535 aa9.72□□□□□ -0.85
CHD7-203ENST00000525508 CFAP65Q6ZU64 1925 aaKnown RBP9.71□□□□□ -0.85
CHD7-203ENST00000525508 GRM8O00222 908 aa9.71□□□□□ -0.85
CHD7-203ENST00000525508 PER1O15534 1290 aaPredicted RBP9.71□□□□□ -0.85
CHD7-203ENST00000525508 GJB2P29033 226 aa9.71□□□□□ -0.85
CHD7-203ENST00000525508 PODXL2Q9NZ53 605 aa9.71□□□□□ -0.85
CHD7-203ENST00000525508 PIK3R4Q99570 1358 aa9.71□□□□□ -0.85
CHD7-203ENST00000525508 PRAG1Q86YV5 1406 aa9.71□□□□□ -0.85
CHD7-203ENST00000525508 MRPL50Q8N5N7 158 aaKnown RBP9.71□□□□□ -0.85
CHD7-203ENST00000525508 KLHDC4Q8TBB5 520 aa9.71□□□□□ -0.85
CHD7-203ENST00000525508 SBNO2Q9Y2G9 1366 aa9.71□□□□□ -0.85
CHD7-203ENST00000525508 NPHP3Q7Z494 1330 aa9.71□□□□□ -0.86
CHD7-203ENST00000525508 RIMS2Q9UQ26 1411 aa9.71□□□□□ -0.86
CHD7-203ENST00000525508 GOLGA8AA7E2F4 631 aa9.71□□□□□ -0.86
CHD7-203ENST00000525508 STIM1Q13586 685 aa9.71□□□□□ -0.86
CHD7-203ENST00000525508 HSP90B2PQ58FF3 399 aa9.71□□□□□ -0.86
CHD7-203ENST00000525508 SMARCE1Q969G3 411 aa9.71□□□□□ -0.86
CHD7-203ENST00000525508 ZNHIT6Q9NWK9 470 aaKnown RBP9.71□□□□□ -0.86
CHD7-203ENST00000525508 ESPNB1AK53 854 aa9.71□□□□□ -0.86
CHD7-203ENST00000525508 HSP90AA4PQ58FG1 418 aa9.71□□□□□ -0.86
CHD7-203ENST00000525508 UBA5Q9GZZ9 404 aa9.71□□□□□ -0.86
CHD7-203ENST00000525508 USP25Q9UHP3 1055 aa9.71□□□□□ -0.86
CHD7-203ENST00000525508 NIP7Q9Y221 180 aaKnown RBP eCLIP9.71□□□□□ -0.86
CHD7-203ENST00000525508 TSPY2A6NKD2 308 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 SEC24BO95487 1268 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 MYCNP04198 464 aaPredicted RBP9.7□□□□□ -0.86
CHD7-203ENST00000525508 DDB1Q16531 1140 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 CCDC24Q8N4L8 307 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 PAF1Q8N7H5 531 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 CPLX3Q8WVH0 158 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 ARGLU1Q9NWB6 273 aaPredicted RBP9.7□□□□□ -0.86
CHD7-203ENST00000525508 TMEM67Q5HYA8 995 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.7□□□□□ -0.86
CHD7-203ENST00000525508 ORC3Q9UBD5 711 aaPredicted RBP9.7□□□□□ -0.86
CHD7-203ENST00000525508 A0A1W2PP64 1363 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 MSH6P52701 1360 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 ECM2O94769 699 aaPredicted RBP9.7□□□□□ -0.86
CHD7-203ENST00000525508 NUCB1Q02818 461 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 SYCP1Q15431 976 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 NEK1Q96PY6 1258 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 BMP2KQ9NSY1 1161 aaPredicted RBP9.7□□□□□ -0.86
CHD7-203ENST00000525508 DNA2P51530 1060 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 ANKRD44Q8N8A2 993 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 TBC1D32Q96NH3 1257 aa9.7□□□□□ -0.86
CHD7-203ENST00000525508 EIF5P55010 431 aaKnown RBP9.69□□□□□ -0.86
CHD7-203ENST00000525508 KSR2Q6VAB6 950 aa9.69□□□□□ -0.86
CHD7-203ENST00000525508 SIRT1Q96EB6 747 aa9.69□□□□□ -0.86
CHD7-203ENST00000525508 CDC5LQ99459 802 aaKnown RBP9.69□□□□□ -0.86
CHD7-203ENST00000525508 SEC63Q9UGP8 760 aaKnown RBP9.69□□□□□ -0.86
CHD7-203ENST00000525508 CPA1P15085 419 aa9.69□□□□□ -0.86
CHD7-203ENST00000525508 NLRP5P59047 1200 aa9.69□□□□□ -0.86
CHD7-203ENST00000525508 ATP2B3Q16720 1220 aa9.69□□□□□ -0.86
CHD7-203ENST00000525508 OTUD7AQ8TE49 926 aaPredicted RBP9.69□□□□□ -0.86
CHD7-203ENST00000525508 C19orf44Q9H6X5 657 aa9.69□□□□□ -0.86
CHD7-203ENST00000525508 LGR6Q9HBX8 967 aa9.69□□□□□ -0.86
CHD7-203ENST00000525508 STX6O43752 255 aa9.69□□□□□ -0.86
CHD7-203ENST00000525508 FAM89AQ96GI7 184 aa9.69□□□□□ -0.86
CHD7-203ENST00000525508 TMX3Q96JJ7 454 aa9.69□□□□□ -0.86
CHD7-203ENST00000525508 TMX1Q9H3N1 280 aa9.69□□□□□ -0.86
CHD7-203ENST00000525508 NSD2O96028 1365 aa9.69□□□□□ -0.86
CHD7-203ENST00000525508 TIMM10P62072 90 aa9.68□□□□□ -0.86
CHD7-203ENST00000525508 AKAP4Q5JQC9 854 aa9.68□□□□□ -0.86
CHD7-203ENST00000525508 SLC9C2Q5TAH2 1124 aa9.68□□□□□ -0.86
CHD7-203ENST00000525508 FSIP1Q8NA03 581 aa9.68□□□□□ -0.86
CHD7-203ENST00000525508 SLC26A6Q9BXS9 759 aa9.68□□□□□ -0.86
CHD7-203ENST00000525508 IDEP14735 1019 aa9.68□□□□□ -0.86
CHD7-203ENST00000525508 IARSP41252 1262 aaKnown RBP9.68□□□□□ -0.86
CHD7-203ENST00000525508 SCAND2PQ9GZW5 306 aaPredicted RBP9.68□□□□□ -0.86
CHD7-203ENST00000525508 BTG4Q9NY30 223 aa9.68□□□□□ -0.86
CHD7-203ENST00000525508 NSFL1CQ9UNZ2 370 aaKnown RBP9.68□□□□□ -0.86
CHD7-203ENST00000525508 RBM8AQ9Y5S9 174 aaKnown RBP9.68□□□□□ -0.86
CHD7-203ENST00000525508 ZMYM3Q14202 1370 aa9.68□□□□□ -0.86
CHD7-203ENST00000525508 DCAF8L1A6NGE4 600 aa9.68□□□□□ -0.86
CHD7-203ENST00000525508 MIGA1Q8NAN2 632 aa9.68□□□□□ -0.86
CHD7-203ENST00000525508 WASF1Q92558 559 aa9.68□□□□□ -0.86
CHD7-203ENST00000525508 SH2B1Q9NRF2 756 aaPredicted RBP9.68□□□□□ -0.86
CHD7-203ENST00000525508 NDUFB9Q9Y6M9 179 aa9.68□□□□□ -0.86
CHD7-203ENST00000525508 KLF18A0A0U1RQI7 1052 aa9.67□□□□□ -0.86
CHD7-203ENST00000525508 BAG4O95429 457 aaKnown RBP9.67□□□□□ -0.86
CHD7-203ENST00000525508 MATR3P43243 847 aaKnown RBP eCLIP9.67□□□□□ -0.86
CHD7-203ENST00000525508 TTLL12Q14166 644 aaPredicted RBP9.67□□□□□ -0.86
CHD7-203ENST00000525508 CCDC112Q8NEF3 446 aa9.67□□□□□ -0.86
CHD7-203ENST00000525508 TRMT1Q9NXH9 659 aaKnown RBP9.67□□□□□ -0.86
CHD7-203ENST00000525508 IL16Q14005 1332 aa9.67□□□□□ -0.86
CHD7-203ENST00000525508 TTC21AQ8NDW8 1320 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms