RNA–Protein interactions for RNA: ENST00000525375.1

GPATCH4-212, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-212ENST00000525375 CDCA7LQ96GN5 454 aa15.46■□□□□ 0.07
GPATCH4-212ENST00000525375 SYT17Q9BSW7 474 aa15.46■□□□□ 0.07
GPATCH4-212ENST00000525375 ERBB4Q15303 1308 aa15.45■□□□□ 0.06
GPATCH4-212ENST00000525375 TCERG1O14776 1098 aaKnown RBP15.45■□□□□ 0.06
GPATCH4-212ENST00000525375 HOXB7P09629 217 aa15.45■□□□□ 0.06
GPATCH4-212ENST00000525375 EXOSC9Q06265 439 aaKnown RBP15.45■□□□□ 0.06
GPATCH4-212ENST00000525375 ZBTB3Q9H5J0 574 aa15.45■□□□□ 0.06
GPATCH4-212ENST00000525375 NUP98P52948 1817 aa15.45■□□□□ 0.06
GPATCH4-212ENST00000525375 XAGE3Q8WTP9 111 aa15.44■□□□□ 0.06
GPATCH4-212ENST00000525375 N4BP2Q86UW6 1770 aaPredicted RBP15.44■□□□□ 0.06
GPATCH4-212ENST00000525375 CCDC24Q8N4L8 307 aa15.43■□□□□ 0.06
GPATCH4-212ENST00000525375 DDX21Q9NR30 783 aaKnown RBP eCLIP15.43■□□□□ 0.06
GPATCH4-212ENST00000525375 PXDNLA1KZ92 1463 aa15.43■□□□□ 0.06
GPATCH4-212ENST00000525375 ANKRD31Q8N7Z5 1873 aa15.43■□□□□ 0.06
GPATCH4-212ENST00000525375 MAP3K15Q6ZN16 1313 aa15.43■□□□□ 0.06
GPATCH4-212ENST00000525375 ANKRD36CQ5JPF3 1778 aa15.42■□□□□ 0.06
GPATCH4-212ENST00000525375 ARFGEF2Q9Y6D5 1785 aa15.42■□□□□ 0.06
GPATCH4-212ENST00000525375 AIMP1Q12904 312 aaKnown RBP15.42■□□□□ 0.06
GPATCH4-212ENST00000525375 TWISTNBQ3B726 338 aaPredicted RBP15.42■□□□□ 0.06
GPATCH4-212ENST00000525375 COPS6Q7L5N1 327 aa15.42■□□□□ 0.06
GPATCH4-212ENST00000525375 PHAXQ9H814 394 aaKnown RBP15.42■□□□□ 0.06
GPATCH4-212ENST00000525375 PARP3Q9Y6F1 533 aa15.42■□□□□ 0.06
GPATCH4-212ENST00000525375 COL11A2P13942 1736 aaPredicted RBP15.42■□□□□ 0.06
GPATCH4-212ENST00000525375 UBN2Q6ZU65 1347 aa15.42■□□□□ 0.06
GPATCH4-212ENST00000525375 TNRC6CQ9HCJ0 1690 aaKnown RBP15.41■□□□□ 0.06
GPATCH4-212ENST00000525375 WWC3Q9ULE0 1092 aa15.41■□□□□ 0.06
GPATCH4-212ENST00000525375 VAMP4O75379 141 aa15.4■□□□□ 0.06
GPATCH4-212ENST00000525375 SERPINB2P05120 415 aa15.4■□□□□ 0.06
GPATCH4-212ENST00000525375 SLFN5Q08AF3 891 aa15.4■□□□□ 0.06
GPATCH4-212ENST00000525375 KIF6Q6ZMV9 814 aa15.4■□□□□ 0.06
GPATCH4-212ENST00000525375 G2E3Q7L622 706 aa15.4■□□□□ 0.06
GPATCH4-212ENST00000525375 ZNF428Q96B54 188 aa15.4■□□□□ 0.06
GPATCH4-212ENST00000525375 ATP10DQ9P241 1426 aa15.4■□□□□ 0.06
GPATCH4-212ENST00000525375 GOLGA2Q08379 1002 aa15.39■□□□□ 0.05
GPATCH4-212ENST00000525375 PRR5LQ6MZQ0 368 aa15.39■□□□□ 0.05
GPATCH4-212ENST00000525375 NPM2Q86SE8 214 aaKnown RBP15.39■□□□□ 0.05
GPATCH4-212ENST00000525375 DBF4Q9UBU7 674 aaPredicted RBP15.39■□□□□ 0.05
GPATCH4-212ENST00000525375 CD2APQ9Y5K6 639 aa15.39■□□□□ 0.05
GPATCH4-212ENST00000525375 BRCA1P38398 1863 aaKnown RBP15.39■□□□□ 0.05
GPATCH4-212ENST00000525375 FAM177BA6PVY3 158 aa15.38■□□□□ 0.05
GPATCH4-212ENST00000525375 GPTP24298 496 aa15.38■□□□□ 0.05
GPATCH4-212ENST00000525375 HNRNPUQ00839 825 aaKnown RBP eCLIP15.38■□□□□ 0.05
GPATCH4-212ENST00000525375 MYH16Q9H6N6 1097 aa15.38■□□□□ 0.05
GPATCH4-212ENST00000525375 NIP7Q9Y221 180 aaKnown RBP eCLIP15.38■□□□□ 0.05
GPATCH4-212ENST00000525375 ABCC12Q96J65 1359 aa15.37■□□□□ 0.05
GPATCH4-212ENST00000525375 ERVV-1B6SEH8 477 aa15.37■□□□□ 0.05
GPATCH4-212ENST00000525375 CLEC4GQ6UXB4 293 aa15.37■□□□□ 0.05
GPATCH4-212ENST00000525375 TRMT2AQ8IZ69 625 aaKnown RBP15.37■□□□□ 0.05
GPATCH4-212ENST00000525375 DLEC1Q9Y238 1755 aa15.36■□□□□ 0.05
GPATCH4-212ENST00000525375 E9PSI1 815 aa15.36■□□□□ 0.05
GPATCH4-212ENST00000525375 DPEP1P16444 411 aa15.36■□□□□ 0.05
GPATCH4-212ENST00000525375 CHRNA5P30532 468 aa15.36■□□□□ 0.05
GPATCH4-212ENST00000525375 GIGYF2Q6Y7W6 1299 aaKnown RBP15.36■□□□□ 0.05
GPATCH4-212ENST00000525375 ZNF34Q8IZ26 560 aa15.36■□□□□ 0.05
GPATCH4-212ENST00000525375 SETDB2Q96T68 719 aa15.36■□□□□ 0.05
GPATCH4-212ENST00000525375 ZNF652Q9Y2D9 606 aa15.36■□□□□ 0.05
GPATCH4-212ENST00000525375 A0A0G2JLW4 131 aa15.35■□□□□ 0.05
GPATCH4-212ENST00000525375 YBX3P16989 372 aaKnown RBP eCLIP15.35■□□□□ 0.05
GPATCH4-212ENST00000525375 KCNA3P22001 575 aa15.35■□□□□ 0.05
GPATCH4-212ENST00000525375 CCDC30Q5VVM6 783 aa15.35■□□□□ 0.05
GPATCH4-212ENST00000525375 HYPKQ9NX55 129 aa15.35■□□□□ 0.05
GPATCH4-212ENST00000525375 ADCY9O60503 1353 aa15.35■□□□□ 0.05
GPATCH4-212ENST00000525375 RGL2O15211 777 aa15.34■□□□□ 0.05
GPATCH4-212ENST00000525375 SUSD4Q5VX71 490 aa15.34■□□□□ 0.05
GPATCH4-212ENST00000525375 NUTM1Q86Y26 1132 aa15.34■□□□□ 0.05
GPATCH4-212ENST00000525375 NTSR2O95665 410 aa15.33■□□□□ 0.04
GPATCH4-212ENST00000525375 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
GPATCH4-212ENST00000525375 NBPF5PQ86XG9 351 aaPredicted RBP15.33■□□□□ 0.04
GPATCH4-212ENST00000525375 CNBD1Q8NA66 436 aa15.33■□□□□ 0.04
GPATCH4-212ENST00000525375 PLBD2Q8NHP8 589 aa15.33■□□□□ 0.04
GPATCH4-212ENST00000525375 ATP5J2-PTCD1G3V325 749 aa15.32■□□□□ 0.04
GPATCH4-212ENST00000525375 ERFEQ4G0M1 354 aa15.32■□□□□ 0.04
GPATCH4-212ENST00000525375 ANKRD13DQ6ZTN6 518 aa15.32■□□□□ 0.04
GPATCH4-212ENST00000525375 C3orf67Q6ZVT6 689 aa15.32■□□□□ 0.04
GPATCH4-212ENST00000525375 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
GPATCH4-212ENST00000525375 SYNE4Q8N205 404 aa15.32■□□□□ 0.04
GPATCH4-212ENST00000525375 DDX60Q8IY21 1712 aaKnown RBP15.31■□□□□ 0.04
GPATCH4-212ENST00000525375 TCIRG1Q13488 830 aa15.31■□□□□ 0.04
GPATCH4-212ENST00000525375 NLRP10Q86W26 655 aa15.31■□□□□ 0.04
GPATCH4-212ENST00000525375 ISCA1Q9BUE6 129 aa15.31■□□□□ 0.04
GPATCH4-212ENST00000525375 STK31Q9BXU1 1019 aa15.31■□□□□ 0.04
GPATCH4-212ENST00000525375 IBTKQ9P2D0 1353 aaPredicted RBP15.31■□□□□ 0.04
GPATCH4-212ENST00000525375 LAMB2P55268 1798 aa15.31■□□□□ 0.04
GPATCH4-212ENST00000525375 CACNA1SQ13698 1873 aa15.31■□□□□ 0.04
GPATCH4-212ENST00000525375 COL4A1P02462 1669 aa15.3■□□□□ 0.04
GPATCH4-212ENST00000525375 TGFB2P61812 414 aa15.3■□□□□ 0.04
GPATCH4-212ENST00000525375 FLIIQ13045 1269 aa15.3■□□□□ 0.04
GPATCH4-212ENST00000525375 ZBED9Q6R2W3 1325 aa15.3■□□□□ 0.04
GPATCH4-212ENST00000525375 SLC51AQ86UW1 340 aa15.3■□□□□ 0.04
GPATCH4-212ENST00000525375 MYD88Q99836 296 aa15.3■□□□□ 0.04
GPATCH4-212ENST00000525375 BCL2L13Q9BXK5 485 aa15.3■□□□□ 0.04
GPATCH4-212ENST00000525375 MAP3K2Q9Y2U5 619 aa15.3■□□□□ 0.04
GPATCH4-212ENST00000525375 PI4KAP2A4QPH2 592 aa15.29■□□□□ 0.04
GPATCH4-212ENST00000525375 RIC3Q7Z5B4 369 aa15.29■□□□□ 0.04
GPATCH4-212ENST00000525375 C2CD5Q86YS7 1000 aa15.29■□□□□ 0.04
GPATCH4-212ENST00000525375 MRPL50Q8N5N7 158 aaKnown RBP15.29■□□□□ 0.04
GPATCH4-212ENST00000525375 PI4KAP1Q8N8J0 262 aa15.29■□□□□ 0.04
GPATCH4-212ENST00000525375 SSH1Q8WYL5 1049 aa15.29■□□□□ 0.04
GPATCH4-212ENST00000525375 IGKV5-2P06315 115 aa15.28■□□□□ 0.04
GPATCH4-212ENST00000525375 ST5P78524 1137 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms