RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 C8orf76Q96K31 380 aa15.69■□□□□ 0.1
LRRK1-202ENST00000525284 TTC14Q96N46 770 aa15.69■□□□□ 0.1
LRRK1-202ENST00000525284 SCAND2PQ9GZW5 306 aaPredicted RBP15.69■□□□□ 0.1
LRRK1-202ENST00000525284 CASQ2O14958 399 aaPredicted RBP15.68■□□□□ 0.1
LRRK1-202ENST00000525284 KRT13P13646 458 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 RAB34Q9BZG1 259 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 CPLX4Q7Z7G2 160 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 CCDC77Q9BR77 488 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 PAXBP1Q9Y5B6 917 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 EBAG9O00559 213 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 TACC1O75410 805 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 CCT4P50991 539 aaKnown RBP15.68■□□□□ 0.1
LRRK1-202ENST00000525284 FSIP1Q8NA03 581 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 EPSTI1Q96J88 318 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 SEC62Q99442 399 aaKnown RBP15.68■□□□□ 0.1
LRRK1-202ENST00000525284 SYNCQ9H7C4 482 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 IDEP14735 1019 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 CCDC85AQ96PX6 553 aaPredicted RBP15.68■□□□□ 0.1
LRRK1-202ENST00000525284 PPP1R12CQ9BZL4 782 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 ABCF2Q9UG63 623 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 CCDC129Q6ZRS4 1044 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 GSTA5Q7RTV2 222 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 SYCP3Q8IZU3 236 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 GAS2L2Q8NHY3 880 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 PANK2Q9BZ23 570 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 KIF21BO75037 1637 aa15.68■□□□□ 0.1
LRRK1-202ENST00000525284 GJC1P36383 396 aa15.67■□□□□ 0.1
LRRK1-202ENST00000525284 PHAXQ9H814 394 aaKnown RBP15.67■□□□□ 0.1
LRRK1-202ENST00000525284 RASAL2Q9UJF2 1139 aa15.67■□□□□ 0.1
LRRK1-202ENST00000525284 CCDC171Q6TFL3 1326 aa15.67■□□□□ 0.1
LRRK1-202ENST00000525284 CTAGE15A4D2H0 777 aa15.67■□□□□ 0.1
LRRK1-202ENST00000525284 SRGAP3O43295 1099 aa15.67■□□□□ 0.1
LRRK1-202ENST00000525284 CTAGE8P0CG41 777 aa15.67■□□□□ 0.1
LRRK1-202ENST00000525284 IFI16Q16666 785 aaKnown RBP15.67■□□□□ 0.1
LRRK1-202ENST00000525284 CTAGE6Q86UF2 777 aa15.67■□□□□ 0.1
LRRK1-202ENST00000525284 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
LRRK1-202ENST00000525284 CTAGE4Q8IX94 777 aa15.67■□□□□ 0.1
LRRK1-202ENST00000525284 STMN2Q93045 179 aa15.67■□□□□ 0.1
LRRK1-202ENST00000525284 VPS18Q9P253 973 aa15.67■□□□□ 0.1
LRRK1-202ENST00000525284 PRPF40BQ6NWY9 871 aaKnown RBP15.67■□□□□ 0.1
LRRK1-202ENST00000525284 GMNNO75496 209 aa15.67■□□□□ 0.1
LRRK1-202ENST00000525284 POLR3DP05423 398 aaPredicted RBP15.67■□□□□ 0.1
LRRK1-202ENST00000525284 CTAGE5O15320 804 aa15.67■□□□□ 0.1
LRRK1-202ENST00000525284 LRRC45Q96CN5 670 aa15.67■□□□□ 0.1
LRRK1-202ENST00000525284 STMN4Q9H169 189 aaPredicted RBP15.67■□□□□ 0.1
LRRK1-202ENST00000525284 NLRP6P59044 892 aa15.66■□□□□ 0.1
LRRK1-202ENST00000525284 CFAP157Q5JU67 520 aa15.66■□□□□ 0.1
LRRK1-202ENST00000525284 CCDC174Q6PII3 467 aa15.66■□□□□ 0.1
LRRK1-202ENST00000525284 MKNK2Q9HBH9 465 aa15.66■□□□□ 0.1
LRRK1-202ENST00000525284 KCNK9Q9NPC2 374 aa15.66■□□□□ 0.1
LRRK1-202ENST00000525284 PRKAR2BP31323 418 aa15.66■□□□□ 0.1
LRRK1-202ENST00000525284 AKR1B10O60218 316 aa15.66■□□□□ 0.1
LRRK1-202ENST00000525284 PCK1P35558 622 aa15.66■□□□□ 0.1
LRRK1-202ENST00000525284 PLEKHO1Q53GL0 409 aaPredicted RBP15.66■□□□□ 0.1
LRRK1-202ENST00000525284 EHBP1Q8NDI1 1231 aa15.66■□□□□ 0.1
LRRK1-202ENST00000525284 CUL5Q93034 780 aa15.66■□□□□ 0.1
LRRK1-202ENST00000525284 PDIA4P13667 645 aaKnown RBP15.66■□□□□ 0.1
LRRK1-202ENST00000525284 STX1AQ16623 288 aa15.66■□□□□ 0.1
LRRK1-202ENST00000525284 CRACR2BQ8N4Y2 399 aaPredicted RBP15.66■□□□□ 0.1
LRRK1-202ENST00000525284 PFDN4Q9NQP4 134 aa15.66■□□□□ 0.1
LRRK1-202ENST00000525284 LACTBP83111 547 aaPredicted RBP15.65■□□□□ 0.1
LRRK1-202ENST00000525284 DIXDC1Q155Q3 683 aa15.65■□□□□ 0.1
LRRK1-202ENST00000525284 CCDC110Q8TBZ0 833 aa15.65■□□□□ 0.1
LRRK1-202ENST00000525284 MTHFSP49914 203 aa15.65■□□□□ 0.1
LRRK1-202ENST00000525284 CABP2Q9NPB3 220 aa15.65■□□□□ 0.1
LRRK1-202ENST00000525284 CEP126Q9P2H0 1117 aa15.65■□□□□ 0.1
LRRK1-202ENST00000525284 LUC7L2Q9Y383 392 aaKnown RBP15.65■□□□□ 0.1
LRRK1-202ENST00000525284 SETDB1Q15047 1291 aa15.65■□□□□ 0.1
LRRK1-202ENST00000525284 IGSF3O75054 1194 aa15.65■□□□□ 0.1
LRRK1-202ENST00000525284 CIB2O75838 187 aa15.65■□□□□ 0.1
LRRK1-202ENST00000525284 NLRP5P59047 1200 aa15.65■□□□□ 0.1
LRRK1-202ENST00000525284 ZNF830Q96NB3 372 aaPredicted RBP15.65■□□□□ 0.1
LRRK1-202ENST00000525284 GRM1Q13255 1194 aa15.64■□□□□ 0.09
LRRK1-202ENST00000525284 TMEM110-MUSTN1A8MSY1 372 aa15.64■□□□□ 0.09
LRRK1-202ENST00000525284 ZNF853P0CG23 659 aa15.64■□□□□ 0.09
LRRK1-202ENST00000525284 ATF3P18847 181 aa15.64■□□□□ 0.09
LRRK1-202ENST00000525284 CCDC194A0A1B0GVG4 234 aa15.64■□□□□ 0.09
LRRK1-202ENST00000525284 PHACTR2O75167 634 aa15.64■□□□□ 0.09
LRRK1-202ENST00000525284 SELENOOQ9BVL4 669 aa15.64■□□□□ 0.09
LRRK1-202ENST00000525284 PLVAPQ9BX97 442 aa15.64■□□□□ 0.09
LRRK1-202ENST00000525284 GDPD2Q9HCC8 539 aa15.64■□□□□ 0.09
LRRK1-202ENST00000525284 STRN4Q9NRL3 753 aa15.64■□□□□ 0.09
LRRK1-202ENST00000525284 PSMD6Q15008 389 aa15.64■□□□□ 0.09
LRRK1-202ENST00000525284 CEP85LQ5SZL2 805 aa15.64■□□□□ 0.09
LRRK1-202ENST00000525284 CCDC170Q8IYT3 715 aa15.64■□□□□ 0.09
LRRK1-202ENST00000525284 CCDC18Q5T9S5 1454 aa15.64■□□□□ 0.09
LRRK1-202ENST00000525284 DDX27Q96GQ7 796 aaKnown RBP15.64■□□□□ 0.09
LRRK1-202ENST00000525284 PRIMPOLQ96LW4 560 aa15.63■□□□□ 0.09
LRRK1-202ENST00000525284 TMOD2Q9NZR1 351 aa15.63■□□□□ 0.09
LRRK1-202ENST00000525284 SAMD15Q9P1V8 674 aa15.63■□□□□ 0.09
LRRK1-202ENST00000525284 DNAI1Q9UI46 699 aa15.63■□□□□ 0.09
LRRK1-202ENST00000525284 A0A1B0GUA9 196 aa15.63■□□□□ 0.09
LRRK1-202ENST00000525284 SSFA2P28290 1259 aa15.63■□□□□ 0.09
LRRK1-202ENST00000525284 CALML4Q96GE6 196 aa15.63■□□□□ 0.09
LRRK1-202ENST00000525284 TRIM7Q9C029 511 aa15.63■□□□□ 0.09
LRRK1-202ENST00000525284 U3KPZ7 1027 aaPredicted RBP15.63■□□□□ 0.09
LRRK1-202ENST00000525284 TLDC2A0PJX2 215 aa15.63■□□□□ 0.09
LRRK1-202ENST00000525284 CLNS1AP54105 237 aaKnown RBP15.63■□□□□ 0.09
LRRK1-202ENST00000525284 CABP4P57796 275 aa15.63■□□□□ 0.09
LRRK1-202ENST00000525284 SSRP1Q08945 709 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms