RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 TRIM35Q9UPQ4 493 aa16.53■□□□□ 0.24
SMCO4-202ENST00000525141 KDM3BQ7LBC6 1761 aa16.52■□□□□ 0.24
SMCO4-202ENST00000525141 TTLL6Q8N841 843 aa16.52■□□□□ 0.24
SMCO4-202ENST00000525141 SBF1O95248 1867 aa16.51■□□□□ 0.23
SMCO4-202ENST00000525141 ANP32CO43423 234 aa16.51■□□□□ 0.23
SMCO4-202ENST00000525141 PDIA6Q15084 440 aa16.51■□□□□ 0.23
SMCO4-202ENST00000525141 TTLL7Q6ZT98 887 aa16.51■□□□□ 0.23
SMCO4-202ENST00000525141 NGEFQ8N5V2 710 aa16.51■□□□□ 0.23
SMCO4-202ENST00000525141 SCN7AQ01118 1682 aa16.5■□□□□ 0.23
SMCO4-202ENST00000525141 PDE6BP35913 854 aa16.5■□□□□ 0.23
SMCO4-202ENST00000525141 NEUROD2Q15784 382 aa16.5■□□□□ 0.23
SMCO4-202ENST00000525141 LRP10Q7Z4F1 713 aa16.5■□□□□ 0.23
SMCO4-202ENST00000525141 NPM2Q86SE8 214 aaKnown RBP16.5■□□□□ 0.23
SMCO4-202ENST00000525141 RUNDC1Q96C34 613 aa16.5■□□□□ 0.23
SMCO4-202ENST00000525141 RGL2O15211 777 aa16.49■□□□□ 0.23
SMCO4-202ENST00000525141 SRGNP10124 158 aa16.49■□□□□ 0.23
SMCO4-202ENST00000525141 RASSF7Q02833 373 aa16.49■□□□□ 0.23
SMCO4-202ENST00000525141 ZNF622Q969S3 477 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMCO4-202ENST00000525141 TSPYL4Q9UJ04 414 aa16.49■□□□□ 0.23
SMCO4-202ENST00000525141 KLRG2A4D1S0 409 aaPredicted RBP16.48■□□□□ 0.23
SMCO4-202ENST00000525141 CHL1O00533 1208 aa16.48■□□□□ 0.23
SMCO4-202ENST00000525141 MYL6BP14649 208 aa16.48■□□□□ 0.23
SMCO4-202ENST00000525141 CCDC184Q52MB2 194 aa16.48■□□□□ 0.23
SMCO4-202ENST00000525141 CNBD1Q8NA66 436 aa16.48■□□□□ 0.23
SMCO4-202ENST00000525141 BABAM1Q9NWV8 329 aa16.48■□□□□ 0.23
SMCO4-202ENST00000525141 NIP7Q9Y221 180 aaKnown RBP eCLIP16.48■□□□□ 0.23
SMCO4-202ENST00000525141 BCORQ6W2J9 1755 aa16.48■□□□□ 0.23
SMCO4-202ENST00000525141 DLEC1Q9Y238 1755 aa16.47■□□□□ 0.23
SMCO4-202ENST00000525141 SENP3-EIF4A1A0A087X0R7 540 aa16.47■□□□□ 0.23
SMCO4-202ENST00000525141 ERVV-1B6SEH8 477 aa16.47■□□□□ 0.23
SMCO4-202ENST00000525141 NFKBIEO00221 500 aa16.47■□□□□ 0.23
SMCO4-202ENST00000525141 KRT24Q2M2I5 525 aa16.47■□□□□ 0.23
SMCO4-202ENST00000525141 C7orf43Q8WVR3 580 aa16.47■□□□□ 0.23
SMCO4-202ENST00000525141 NMRK2Q9NPI5 230 aa16.47■□□□□ 0.23
SMCO4-202ENST00000525141 RNF181Q9P0P0 153 aa16.47■□□□□ 0.23
SMCO4-202ENST00000525141 PDZRN3Q9UPQ7 1066 aa16.47■□□□□ 0.23
SMCO4-202ENST00000525141 FAM177BA6PVY3 158 aa16.46■□□□□ 0.23
SMCO4-202ENST00000525141 C21orf2O43822 256 aa16.46■□□□□ 0.23
SMCO4-202ENST00000525141 PROSER3Q2NL68 480 aa16.46■□□□□ 0.23
SMCO4-202ENST00000525141 TPTE2Q6XPS3 522 aa16.46■□□□□ 0.23
SMCO4-202ENST00000525141 NBPF5PQ86XG9 351 aaPredicted RBP16.46■□□□□ 0.23
SMCO4-202ENST00000525141 ZNF219Q9P2Y4 722 aaPredicted RBP16.46■□□□□ 0.23
SMCO4-202ENST00000525141 MAP3K15Q6ZN16 1313 aa16.45■□□□□ 0.22
SMCO4-202ENST00000525141 SLX4Q8IY92 1834 aa16.45■□□□□ 0.22
SMCO4-202ENST00000525141 ANXA1P04083 346 aa16.45■□□□□ 0.22
SMCO4-202ENST00000525141 EIF2S2P20042 333 aaKnown RBP16.45■□□□□ 0.22
SMCO4-202ENST00000525141 STYK1Q6J9G0 422 aa16.45■□□□□ 0.22
SMCO4-202ENST00000525141 ZNF652Q9Y2D9 606 aa16.45■□□□□ 0.22
SMCO4-202ENST00000525141 ST5P78524 1137 aa16.44■□□□□ 0.22
SMCO4-202ENST00000525141 WDR43Q15061 677 aaKnown RBP eCLIP16.44■□□□□ 0.22
SMCO4-202ENST00000525141 ZNF34Q8IZ26 560 aa16.44■□□□□ 0.22
SMCO4-202ENST00000525141 MASTLQ96GX5 879 aa16.44■□□□□ 0.22
SMCO4-202ENST00000525141 NUP98P52948 1817 aa16.43■□□□□ 0.22
SMCO4-202ENST00000525141 COL11A2P13942 1736 aaPredicted RBP16.43■□□□□ 0.22
SMCO4-202ENST00000525141 LMNB1P20700 586 aa16.43■□□□□ 0.22
SMCO4-202ENST00000525141 LMOD3Q0VAK6 560 aa16.43■□□□□ 0.22
SMCO4-202ENST00000525141 SUSD4Q5VX71 490 aa16.43■□□□□ 0.22
SMCO4-202ENST00000525141 CNKSR1Q969H4 720 aa16.43■□□□□ 0.22
SMCO4-202ENST00000525141 ZBTB3Q9H5J0 574 aa16.43■□□□□ 0.22
SMCO4-202ENST00000525141 CCDC88AQ3V6T2 1871 aa16.43■□□□□ 0.22
SMCO4-202ENST00000525141 LAMB4A4D0S4 1761 aa16.43■□□□□ 0.22
SMCO4-202ENST00000525141 NECTIN2Q92692 538 aa16.42■□□□□ 0.22
SMCO4-202ENST00000525141 RRAGCQ9HB90 399 aa16.42■□□□□ 0.22
SMCO4-202ENST00000525141 ERBB4Q15303 1308 aa16.42■□□□□ 0.22
SMCO4-202ENST00000525141 UBN2Q6ZU65 1347 aa16.42■□□□□ 0.22
SMCO4-202ENST00000525141 APAF1O14727 1248 aa16.41■□□□□ 0.22
SMCO4-202ENST00000525141 ZNF853P0CG23 659 aa16.41■□□□□ 0.22
SMCO4-202ENST00000525141 ERFEQ4G0M1 354 aa16.41■□□□□ 0.22
SMCO4-202ENST00000525141 PRPF40BQ6NWY9 871 aaKnown RBP16.41■□□□□ 0.22
SMCO4-202ENST00000525141 OLFM4Q6UX06 510 aa16.41■□□□□ 0.22
SMCO4-202ENST00000525141 GIGYF2Q6Y7W6 1299 aaKnown RBP16.41■□□□□ 0.22
SMCO4-202ENST00000525141 NUTM1Q86Y26 1132 aa16.41■□□□□ 0.22
SMCO4-202ENST00000525141 LAS1LQ9Y4W2 734 aaKnown RBP16.41■□□□□ 0.22
SMCO4-202ENST00000525141 POTECB2RU33 542 aa16.4■□□□□ 0.22
SMCO4-202ENST00000525141 NPHP1O15259 732 aa16.4■□□□□ 0.22
SMCO4-202ENST00000525141 NPR1P16066 1061 aa16.4■□□□□ 0.22
SMCO4-202ENST00000525141 GPTP24298 496 aa16.4■□□□□ 0.22
SMCO4-202ENST00000525141 COPS6Q7L5N1 327 aa16.4■□□□□ 0.22
SMCO4-202ENST00000525141 TOMM70O94826 608 aa16.39■□□□□ 0.21
SMCO4-202ENST00000525141 KIF6Q6ZMV9 814 aa16.39■□□□□ 0.21
SMCO4-202ENST00000525141 CFAP44Q96MT7 982 aa16.39■□□□□ 0.21
SMCO4-202ENST00000525141 FER1L6Q2WGJ9 1857 aa16.39■□□□□ 0.21
SMCO4-202ENST00000525141 GLTPD2A6NH11 291 aa16.38■□□□□ 0.21
SMCO4-202ENST00000525141 HSPA6P17066 643 aa16.38■□□□□ 0.21
SMCO4-202ENST00000525141 CRY2Q49AN0 593 aa16.38■□□□□ 0.21
SMCO4-202ENST00000525141 C3orf67Q6ZVT6 689 aa16.38■□□□□ 0.21
SMCO4-202ENST00000525141 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
SMCO4-202ENST00000525141 NTSR2O95665 410 aa16.37■□□□□ 0.21
SMCO4-202ENST00000525141 XAGE3Q8WTP9 111 aa16.37■□□□□ 0.21
SMCO4-202ENST00000525141 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMCO4-202ENST00000525141 MBIPQ9NS73 344 aa16.37■□□□□ 0.21
SMCO4-202ENST00000525141 CEP350Q5VT06 3117 aa16.37■□□□□ 0.21
SMCO4-202ENST00000525141 LTBP3Q9NS15 1303 aa16.37■□□□□ 0.21
SMCO4-202ENST00000525141 GTF2E1P29083 439 aaPredicted RBP16.36■□□□□ 0.21
SMCO4-202ENST00000525141 AIMP1Q12904 312 aaKnown RBP16.36■□□□□ 0.21
SMCO4-202ENST00000525141 SLC10A5Q5PT55 438 aa16.36■□□□□ 0.21
SMCO4-202ENST00000525141 SLC51AQ86UW1 340 aa16.36■□□□□ 0.21
SMCO4-202ENST00000525141 SYNE4Q8N205 404 aa16.36■□□□□ 0.21
SMCO4-202ENST00000525141 NYXQ9GZU5 481 aa16.36■□□□□ 0.21
SMCO4-202ENST00000525141 KDM2BQ8NHM5 1336 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms