RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 MPRIPQ6WCQ1 1025 aa11.56□□□□□ -0.56
DEPDC1-205ENST00000525124 MRPL50Q8N5N7 158 aaKnown RBP11.56□□□□□ -0.56
DEPDC1-205ENST00000525124 WNT2BQ93097 391 aa11.56□□□□□ -0.56
DEPDC1-205ENST00000525124 EYA1Q99502 592 aa11.56□□□□□ -0.56
DEPDC1-205ENST00000525124 POLKQ9UBT6 870 aa11.56□□□□□ -0.56
DEPDC1-205ENST00000525124 SSFA2P28290 1259 aa11.55□□□□□ -0.56
DEPDC1-205ENST00000525124 C1QTNF8P60827 252 aa11.55□□□□□ -0.56
DEPDC1-205ENST00000525124 IFNL2Q8IZJ0 200 aa11.55□□□□□ -0.56
DEPDC1-205ENST00000525124 PIGBQ92521 554 aa11.55□□□□□ -0.56
DEPDC1-205ENST00000525124 C4AP0C0L4 1744 aa11.55□□□□□ -0.56
DEPDC1-205ENST00000525124 MYH14Q7Z406 1995 aaKnown RBP11.54□□□□□ -0.56
DEPDC1-205ENST00000525124 PCDHGA10Q9Y5H3 936 aa11.54□□□□□ -0.56
DEPDC1-205ENST00000525124 ARFGEF1Q9Y6D6 1849 aa11.53□□□□□ -0.56
DEPDC1-205ENST00000525124 LOC102724428A0A0B4J2F2 783 aa11.53□□□□□ -0.56
DEPDC1-205ENST00000525124 GOLGA8CPA6NN73 597 aa11.53□□□□□ -0.56
DEPDC1-205ENST00000525124 PHKG2P15735 406 aa11.53□□□□□ -0.56
DEPDC1-205ENST00000525124 YBX3P16989 372 aaKnown RBP eCLIP11.53□□□□□ -0.56
DEPDC1-205ENST00000525124 SIK1P57059 783 aa11.53□□□□□ -0.56
DEPDC1-205ENST00000525124 IFFO2Q5TF58 517 aa11.53□□□□□ -0.56
DEPDC1-205ENST00000525124 AK7Q96M32 723 aa11.53□□□□□ -0.56
DEPDC1-205ENST00000525124 N4BP2Q86UW6 1770 aaPredicted RBP11.53□□□□□ -0.56
DEPDC1-205ENST00000525124 IGSF1Q8N6C5 1336 aa11.53□□□□□ -0.56
DEPDC1-205ENST00000525124 TMOD3Q9NYL9 352 aa11.52□□□□□ -0.57
DEPDC1-205ENST00000525124 KDRP35968 1356 aa11.52□□□□□ -0.57
DEPDC1-205ENST00000525124 PPM1GO15355 546 aaPredicted RBP11.51□□□□□ -0.57
DEPDC1-205ENST00000525124 EIF4A2Q14240 407 aaKnown RBP11.51□□□□□ -0.57
DEPDC1-205ENST00000525124 MSL1Q68DK7 614 aa11.51□□□□□ -0.57
DEPDC1-205ENST00000525124 TJP1Q07157 1748 aa11.51□□□□□ -0.57
DEPDC1-205ENST00000525124 ADCY9O60503 1353 aa11.51□□□□□ -0.57
DEPDC1-205ENST00000525124 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.5□□□□□ -0.57
DEPDC1-205ENST00000525124 ERVV-2B6SEH9 535 aa11.5□□□□□ -0.57
DEPDC1-205ENST00000525124 GIGYF1O75420 1035 aaPredicted RBP11.5□□□□□ -0.57
DEPDC1-205ENST00000525124 HSP90AB1P08238 724 aaKnown RBP11.5□□□□□ -0.57
DEPDC1-205ENST00000525124 AMIGO3Q86WK7 504 aa11.5□□□□□ -0.57
DEPDC1-205ENST00000525124 LINC00116Q8NCU8 138 aa11.5□□□□□ -0.57
DEPDC1-205ENST00000525124 NBPF3Q9H094 633 aa11.5□□□□□ -0.57
DEPDC1-205ENST00000525124 COL9A1P20849 921 aa11.49□□□□□ -0.57
DEPDC1-205ENST00000525124 EIF4G2P78344 907 aaKnown RBP eCLIP11.49□□□□□ -0.57
DEPDC1-205ENST00000525124 PROX2Q3B8N5 592 aa11.49□□□□□ -0.57
DEPDC1-205ENST00000525124 RC3H1Q5TC82 1133 aaKnown RBP11.49□□□□□ -0.57
DEPDC1-205ENST00000525124 ATG3Q9NT62 314 aa11.49□□□□□ -0.57
DEPDC1-205ENST00000525124 ASAP1Q9ULH1 1129 aa11.49□□□□□ -0.57
DEPDC1-205ENST00000525124 ADAMTS7Q9UKP4 1686 aa11.49□□□□□ -0.57
DEPDC1-205ENST00000525124 PPP1R3GB7ZBB8 358 aa11.48□□□□□ -0.57
DEPDC1-205ENST00000525124 ATP6V1AP38606 617 aa11.48□□□□□ -0.57
DEPDC1-205ENST00000525124 ITPK1Q13572 414 aa11.48□□□□□ -0.57
DEPDC1-205ENST00000525124 DCAF5Q96JK2 942 aa11.48□□□□□ -0.57
DEPDC1-205ENST00000525124 KDM6AO15550 1401 aaPredicted RBP11.47□□□□□ -0.57
DEPDC1-205ENST00000525124 ATP10DQ9P241 1426 aa11.47□□□□□ -0.57
DEPDC1-205ENST00000525124 CNTNAP4Q9C0A0 1308 aa11.47□□□□□ -0.57
DEPDC1-205ENST00000525124 SENP3-EIF4A1A0A087X0R7 540 aa11.47□□□□□ -0.57
DEPDC1-205ENST00000525124 AMOTQ4VCS5 1084 aa11.47□□□□□ -0.57
DEPDC1-205ENST00000525124 PLEKHO1Q53GL0 409 aaPredicted RBP11.47□□□□□ -0.57
DEPDC1-205ENST00000525124 RABGEF1Q9UJ41 708 aa11.47□□□□□ -0.57
DEPDC1-205ENST00000525124 GNPATO15228 680 aa11.46□□□□□ -0.57
DEPDC1-205ENST00000525124 PHF14O94880 888 aa11.46□□□□□ -0.57
DEPDC1-205ENST00000525124 HSPA5P11021 654 aaKnown RBP11.46□□□□□ -0.57
DEPDC1-205ENST00000525124 PANK3Q9H999 370 aa11.46□□□□□ -0.57
DEPDC1-205ENST00000525124 SBF1O95248 1867 aa11.46□□□□□ -0.58
DEPDC1-205ENST00000525124 UBR2Q8IWV8 1755 aa11.46□□□□□ -0.58
DEPDC1-205ENST00000525124 PXDNLA1KZ92 1463 aa11.45□□□□□ -0.58
DEPDC1-205ENST00000525124 C10orf71Q711Q0 1435 aa11.45□□□□□ -0.58
DEPDC1-205ENST00000525124 AFDNP55196 1824 aaKnown RBP11.45□□□□□ -0.58
DEPDC1-205ENST00000525124 NLGN1Q8N2Q7 840 aa11.45□□□□□ -0.58
DEPDC1-205ENST00000525124 SLC4A9Q96Q91 983 aa11.45□□□□□ -0.58
DEPDC1-205ENST00000525124 RTCBQ9Y3I0 505 aaKnown RBP11.45□□□□□ -0.58
DEPDC1-205ENST00000525124 DLEC1Q9Y238 1755 aa11.44□□□□□ -0.58
DEPDC1-205ENST00000525124 NRXN2Q9P2S2 1712 aa11.44□□□□□ -0.58
DEPDC1-205ENST00000525124 RGS20O76081 388 aa11.44□□□□□ -0.58
DEPDC1-205ENST00000525124 TGFB2P61812 414 aa11.44□□□□□ -0.58
DEPDC1-205ENST00000525124 TRAPPC3LQ5T215 181 aa11.44□□□□□ -0.58
DEPDC1-205ENST00000525124 MRC1P22897 1456 aa11.44□□□□□ -0.58
DEPDC1-205ENST00000525124 SIPA1L3O60292 1781 aaPredicted RBP11.44□□□□□ -0.58
DEPDC1-205ENST00000525124 CEP350Q5VT06 3117 aa11.43□□□□□ -0.58
DEPDC1-205ENST00000525124 RPS6KA4O75676 772 aa11.43□□□□□ -0.58
DEPDC1-205ENST00000525124 TNNT2P45379 298 aaPredicted RBP11.43□□□□□ -0.58
DEPDC1-205ENST00000525124 TYW1BQ6NUM6 668 aa11.43□□□□□ -0.58
DEPDC1-205ENST00000525124 SMIM5Q71RC9 77 aa11.43□□□□□ -0.58
DEPDC1-205ENST00000525124 FBXW7Q969H0 707 aa11.43□□□□□ -0.58
DEPDC1-205ENST00000525124 MMP10P09238 476 aa11.42□□□□□ -0.58
DEPDC1-205ENST00000525124 ZNF530Q6P9A1 599 aaPredicted RBP11.42□□□□□ -0.58
DEPDC1-205ENST00000525124 MORC1Q86VD1 984 aa11.42□□□□□ -0.58
DEPDC1-205ENST00000525124 ARHGEF1Q92888 912 aaKnown RBP11.42□□□□□ -0.58
DEPDC1-205ENST00000525124 POLR3GLQ9BT43 218 aa11.42□□□□□ -0.58
DEPDC1-205ENST00000525124 GPBP1L1Q9HC44 474 aaPredicted RBP11.42□□□□□ -0.58
DEPDC1-205ENST00000525124 CCDC88AQ3V6T2 1871 aa11.41□□□□□ -0.58
DEPDC1-205ENST00000525124 GYS1P13807 737 aa11.41□□□□□ -0.58
DEPDC1-205ENST00000525124 CABP4P57796 275 aa11.41□□□□□ -0.58
DEPDC1-205ENST00000525124 CAMK2BQ13554 666 aa11.41□□□□□ -0.58
DEPDC1-205ENST00000525124 C1orf141Q5JVX7 400 aa11.41□□□□□ -0.58
DEPDC1-205ENST00000525124 PCGF6Q9BYE7 350 aa11.41□□□□□ -0.58
DEPDC1-205ENST00000525124 IL13P35225 146 aa11.4□□□□□ -0.58
DEPDC1-205ENST00000525124 MTHFSP49914 203 aa11.4□□□□□ -0.58
DEPDC1-205ENST00000525124 CCDC87Q9NVE4 849 aa11.4□□□□□ -0.58
DEPDC1-205ENST00000525124 KNSTRNQ9Y448 316 aa11.4□□□□□ -0.58
DEPDC1-205ENST00000525124 TNRC6CQ9HCJ0 1690 aaKnown RBP11.4□□□□□ -0.59
DEPDC1-205ENST00000525124 RFC4P35249 363 aa11.39□□□□□ -0.59
DEPDC1-205ENST00000525124 AKAP4Q5JQC9 854 aa11.39□□□□□ -0.59
DEPDC1-205ENST00000525124 AMER1Q5JTC6 1135 aaPredicted RBP11.39□□□□□ -0.59
DEPDC1-205ENST00000525124 SULT6B1Q6IMI4 303 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms