RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 H0YIN7 160 aa14.63□□□□□ -0.07
TRAPPC4-204ENST00000524797 CNBD1Q8NA66 436 aa14.63□□□□□ -0.07
TRAPPC4-204ENST00000524797 PDZRN3Q9UPQ7 1066 aa14.63□□□□□ -0.07
TRAPPC4-204ENST00000524797 CHL1O00533 1208 aa14.62□□□□□ -0.07
TRAPPC4-204ENST00000524797 HLFQ16534 295 aa14.62□□□□□ -0.07
TRAPPC4-204ENST00000524797 NGEFQ8N5V2 710 aa14.62□□□□□ -0.07
TRAPPC4-204ENST00000524797 MYL6BP14649 208 aa14.62□□□□□ -0.07
TRAPPC4-204ENST00000524797 PDE6BP35913 854 aa14.62□□□□□ -0.07
TRAPPC4-204ENST00000524797 CCDC184Q52MB2 194 aa14.62□□□□□ -0.07
TRAPPC4-204ENST00000524797 MAP3K15Q6ZN16 1313 aa14.61□□□□□ -0.07
TRAPPC4-204ENST00000524797 ST5P78524 1137 aa14.61□□□□□ -0.07
TRAPPC4-204ENST00000524797 TTLL7Q6ZT98 887 aa14.61□□□□□ -0.07
TRAPPC4-204ENST00000524797 NBPF5PQ86XG9 351 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC4-204ENST00000524797 TTLL6Q8N841 843 aa14.61□□□□□ -0.07
TRAPPC4-204ENST00000524797 NIP7Q9Y221 180 aaKnown RBP eCLIP14.61□□□□□ -0.07
TRAPPC4-204ENST00000524797 LAS1LQ9Y4W2 734 aaKnown RBP14.61□□□□□ -0.07
TRAPPC4-204ENST00000524797 ANKRD36CQ5JPF3 1778 aa14.61□□□□□ -0.07
TRAPPC4-204ENST00000524797 ERVV-1B6SEH8 477 aa14.6□□□□□ -0.07
TRAPPC4-204ENST00000524797 KIF6Q6ZMV9 814 aa14.6□□□□□ -0.07
TRAPPC4-204ENST00000524797 SLX4Q8IY92 1834 aa14.6□□□□□ -0.07
TRAPPC4-204ENST00000524797 FER1L6Q2WGJ9 1857 aa14.6□□□□□ -0.07
TRAPPC4-204ENST00000524797 APAF1O14727 1248 aa14.6□□□□□ -0.07
TRAPPC4-204ENST00000524797 NPHP1O15259 732 aa14.6□□□□□ -0.07
TRAPPC4-204ENST00000524797 EIF2S2P20042 333 aaKnown RBP14.6□□□□□ -0.07
TRAPPC4-204ENST00000524797 TNRC6CQ9HCJ0 1690 aaKnown RBP14.6□□□□□ -0.07
TRAPPC4-204ENST00000524797 PDIA6Q15084 440 aa14.59□□□□□ -0.07
TRAPPC4-204ENST00000524797 ZNF526Q8TF50 670 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC4-204ENST00000524797 ZNF622Q969S3 477 aaKnown RBP eCLIP14.59□□□□□ -0.07
TRAPPC4-204ENST00000524797 KRT24Q2M2I5 525 aa14.58□□□□□ -0.07
TRAPPC4-204ENST00000524797 C9orf131Q5VYM1 1079 aa14.58□□□□□ -0.07
TRAPPC4-204ENST00000524797 LRP10Q7Z4F1 713 aa14.58□□□□□ -0.07
TRAPPC4-204ENST00000524797 GPBP1L1Q9HC44 474 aaPredicted RBP14.58□□□□□ -0.07
TRAPPC4-204ENST00000524797 TIAM2Q8IVF5 1701 aa14.58□□□□□ -0.08
TRAPPC4-204ENST00000524797 C1QTNF8P60827 252 aa14.58□□□□□ -0.08
TRAPPC4-204ENST00000524797 PROSER3Q2NL68 480 aa14.58□□□□□ -0.08
TRAPPC4-204ENST00000524797 STYK1Q6J9G0 422 aa14.58□□□□□ -0.08
TRAPPC4-204ENST00000524797 ZBTB3Q9H5J0 574 aa14.58□□□□□ -0.08
TRAPPC4-204ENST00000524797 DICER1Q9UPY3 1922 aaKnown RBP14.58□□□□□ -0.08
TRAPPC4-204ENST00000524797 FAM177BA6PVY3 158 aa14.57□□□□□ -0.08
TRAPPC4-204ENST00000524797 ANXA1P04083 346 aa14.57□□□□□ -0.08
TRAPPC4-204ENST00000524797 RASSF7Q02833 373 aa14.57□□□□□ -0.08
TRAPPC4-204ENST00000524797 TPTE2Q6XPS3 522 aa14.57□□□□□ -0.08
TRAPPC4-204ENST00000524797 CFAP44Q96MT7 982 aa14.57□□□□□ -0.08
TRAPPC4-204ENST00000524797 UTRNP46939 3433 aa14.57□□□□□ -0.08
TRAPPC4-204ENST00000524797 ANP32CO43423 234 aa14.56□□□□□ -0.08
TRAPPC4-204ENST00000524797 ZNF853P0CG23 659 aa14.56□□□□□ -0.08
TRAPPC4-204ENST00000524797 SRGNP10124 158 aa14.56□□□□□ -0.08
TRAPPC4-204ENST00000524797 NECTIN2Q92692 538 aa14.56□□□□□ -0.08
TRAPPC4-204ENST00000524797 CNKSR1Q969H4 720 aa14.56□□□□□ -0.08
TRAPPC4-204ENST00000524797 MASTLQ96GX5 879 aa14.56□□□□□ -0.08
TRAPPC4-204ENST00000524797 RNF181Q9P0P0 153 aa14.56□□□□□ -0.08
TRAPPC4-204ENST00000524797 IBTKQ9P2D0 1353 aaPredicted RBP14.56□□□□□ -0.08
TRAPPC4-204ENST00000524797 GIGYF2Q6Y7W6 1299 aaKnown RBP14.55□□□□□ -0.08
TRAPPC4-204ENST00000524797 ZNF34Q8IZ26 560 aa14.55□□□□□ -0.08
TRAPPC4-204ENST00000524797 NYXQ9GZU5 481 aa14.55□□□□□ -0.08
TRAPPC4-204ENST00000524797 MBIPQ9NS73 344 aa14.55□□□□□ -0.08
TRAPPC4-204ENST00000524797 UBN2Q6ZU65 1347 aa14.55□□□□□ -0.08
TRAPPC4-204ENST00000524797 ABCC12Q96J65 1359 aa14.55□□□□□ -0.08
TRAPPC4-204ENST00000524797 KLRG2A4D1S0 409 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC4-204ENST00000524797 HOXB7P09629 217 aa14.54□□□□□ -0.08
TRAPPC4-204ENST00000524797 GPTP24298 496 aa14.54□□□□□ -0.08
TRAPPC4-204ENST00000524797 DDX21Q9NR30 783 aaKnown RBP eCLIP14.54□□□□□ -0.08
TRAPPC4-204ENST00000524797 IFT57Q9NWB7 429 aa14.54□□□□□ -0.08
TRAPPC4-204ENST00000524797 ZNF219Q9P2Y4 722 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC4-204ENST00000524797 GOLGB1Q14789 3259 aaKnown RBP14.54□□□□□ -0.08
TRAPPC4-204ENST00000524797 NFKBIEO00221 500 aa14.54□□□□□ -0.08
TRAPPC4-204ENST00000524797 NPR1P16066 1061 aa14.54□□□□□ -0.08
TRAPPC4-204ENST00000524797 PRELPP51888 382 aa14.54□□□□□ -0.08
TRAPPC4-204ENST00000524797 CALD1Q05682 793 aaKnown RBP14.54□□□□□ -0.08
TRAPPC4-204ENST00000524797 MRS2Q9HD23 443 aa14.54□□□□□ -0.08
TRAPPC4-204ENST00000524797 RIC1Q4ADV7 1423 aa14.54□□□□□ -0.08
TRAPPC4-204ENST00000524797 LAMB2P55268 1798 aa14.53□□□□□ -0.08
TRAPPC4-204ENST00000524797 C21orf2O43822 256 aa14.53□□□□□ -0.08
TRAPPC4-204ENST00000524797 GTF2E1P29083 439 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC4-204ENST00000524797 GNAI1P63096 354 aa14.53□□□□□ -0.08
TRAPPC4-204ENST00000524797 ERFEQ4G0M1 354 aa14.53□□□□□ -0.08
TRAPPC4-204ENST00000524797 SUSD4Q5VX71 490 aa14.53□□□□□ -0.08
TRAPPC4-204ENST00000524797 PRPF40BQ6NWY9 871 aaKnown RBP14.53□□□□□ -0.08
TRAPPC4-204ENST00000524797 XAGE3Q8WTP9 111 aa14.53□□□□□ -0.08
TRAPPC4-204ENST00000524797 HDGFL1Q5TGJ6 251 aa14.53□□□□□ -0.08
TRAPPC4-204ENST00000524797 DUSP27Q5VZP5 1158 aa14.53□□□□□ -0.08
TRAPPC4-204ENST00000524797 COPS6Q7L5N1 327 aa14.53□□□□□ -0.08
TRAPPC4-204ENST00000524797 NUTM1Q86Y26 1132 aa14.53□□□□□ -0.08
TRAPPC4-204ENST00000524797 CHPF2Q9P2E5 772 aa14.53□□□□□ -0.08
TRAPPC4-204ENST00000524797 KIF3CO14782 793 aa14.52□□□□□ -0.09
TRAPPC4-204ENST00000524797 NTSR2O95665 410 aa14.52□□□□□ -0.09
TRAPPC4-204ENST00000524797 LMNB1P20700 586 aa14.52□□□□□ -0.09
TRAPPC4-204ENST00000524797 AIMP1Q12904 312 aaKnown RBP14.51□□□□□ -0.09
TRAPPC4-204ENST00000524797 PARP10Q53GL7 1025 aa14.51□□□□□ -0.09
TRAPPC4-204ENST00000524797 ZC3H4Q9UPT8 1303 aaKnown RBP14.51□□□□□ -0.09
TRAPPC4-204ENST00000524797 LTBP3Q9NS15 1303 aa14.5□□□□□ -0.09
TRAPPC4-204ENST00000524797 HSP90AB3PQ58FF7 597 aa14.5□□□□□ -0.09
TRAPPC4-204ENST00000524797 SOGA3Q5TF21 947 aa14.5□□□□□ -0.09
TRAPPC4-204ENST00000524797 PPP1R42Q7Z4L9 355 aa14.5□□□□□ -0.09
TRAPPC4-204ENST00000524797 SENP3-EIF4A1A0A087X0R7 540 aa14.49□□□□□ -0.09
TRAPPC4-204ENST00000524797 CCDC27Q2M243 656 aa14.49□□□□□ -0.09
TRAPPC4-204ENST00000524797 CRY2Q49AN0 593 aa14.49□□□□□ -0.09
TRAPPC4-204ENST00000524797 C7orf43Q8WVR3 580 aa14.49□□□□□ -0.09
TRAPPC4-204ENST00000524797 NMRK2Q9NPI5 230 aa14.49□□□□□ -0.09
TRAPPC4-204ENST00000524797 DBF4Q9UBU7 674 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms