RNA–Protein interactions for RNA: ENST00000524528.1

FGFR1-225, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-225ENST00000524528 HLFQ16534 295 aa13.57□□□□□ -0.24
FGFR1-225ENST00000524528 SLC51AQ86UW1 340 aa13.57□□□□□ -0.24
FGFR1-225ENST00000524528 SIPA1L3O60292 1781 aaPredicted RBP13.57□□□□□ -0.24
FGFR1-225ENST00000524528 DLEC1Q9Y238 1755 aa13.57□□□□□ -0.24
FGFR1-225ENST00000524528 STYK1Q6J9G0 422 aa13.56□□□□□ -0.24
FGFR1-225ENST00000524528 PRPF40BQ6NWY9 871 aaKnown RBP13.56□□□□□ -0.24
FGFR1-225ENST00000524528 KLRG2A4D1S0 409 aaPredicted RBP13.55□□□□□ -0.24
FGFR1-225ENST00000524528 U2AF1L5P0DN76 240 aaPredicted RBP13.55□□□□□ -0.24
FGFR1-225ENST00000524528 U2AF1Q01081 240 aaKnown RBP eCLIP13.55□□□□□ -0.24
FGFR1-225ENST00000524528 CNBD1Q8NA66 436 aa13.55□□□□□ -0.24
FGFR1-225ENST00000524528 MASTLQ96GX5 879 aa13.55□□□□□ -0.24
FGFR1-225ENST00000524528 COL11A2P13942 1736 aaPredicted RBP13.55□□□□□ -0.24
FGFR1-225ENST00000524528 FAM177BA6PVY3 158 aa13.54□□□□□ -0.24
FGFR1-225ENST00000524528 SNRPA1P09661 255 aaKnown RBP13.54□□□□□ -0.24
FGFR1-225ENST00000524528 DPY19L2Q6NUT2 758 aa13.54□□□□□ -0.24
FGFR1-225ENST00000524528 CNKSR1Q969H4 720 aa13.54□□□□□ -0.24
FGFR1-225ENST00000524528 LTBP3Q9NS15 1303 aa13.54□□□□□ -0.24
FGFR1-225ENST00000524528 FER1L6Q2WGJ9 1857 aa13.53□□□□□ -0.24
FGFR1-225ENST00000524528 HSPA1AP0DMV8 641 aaKnown RBP13.53□□□□□ -0.24
FGFR1-225ENST00000524528 HSPA1BP0DMV9 641 aaKnown RBP13.53□□□□□ -0.24
FGFR1-225ENST00000524528 CLEC4GQ6UXB4 293 aa13.53□□□□□ -0.24
FGFR1-225ENST00000524528 TAOK3Q9H2K8 898 aa13.53□□□□□ -0.24
FGFR1-225ENST00000524528 PDZRN3Q9UPQ7 1066 aa13.53□□□□□ -0.24
FGFR1-225ENST00000524528 TNRC6CQ9HCJ0 1690 aaKnown RBP13.53□□□□□ -0.24
FGFR1-225ENST00000524528 NBPF5PQ86XG9 351 aaPredicted RBP13.52□□□□□ -0.25
FGFR1-225ENST00000524528 ZNF277Q9NRM2 450 aaPredicted RBP13.52□□□□□ -0.25
FGFR1-225ENST00000524528 ZNF541Q9H0D2 1346 aa13.51□□□□□ -0.25
FGFR1-225ENST00000524528 TAF7Q15545 349 aaPredicted RBP13.51□□□□□ -0.25
FGFR1-225ENST00000524528 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
FGFR1-225ENST00000524528 TTLL7Q6ZT98 887 aa13.51□□□□□ -0.25
FGFR1-225ENST00000524528 NGEFQ8N5V2 710 aa13.51□□□□□ -0.25
FGFR1-225ENST00000524528 THUMPD2Q9BTF0 503 aaKnown RBP13.51□□□□□ -0.25
FGFR1-225ENST00000524528 MKRN1Q9UHC7 482 aaKnown RBP13.51□□□□□ -0.25
FGFR1-225ENST00000524528 NIP7Q9Y221 180 aaKnown RBP eCLIP13.51□□□□□ -0.25
FGFR1-225ENST00000524528 SCN7AQ01118 1682 aa13.5□□□□□ -0.25
FGFR1-225ENST00000524528 CAPN15O75808 1086 aa13.5□□□□□ -0.25
FGFR1-225ENST00000524528 ITGBL1O95965 494 aaPredicted RBP13.5□□□□□ -0.25
FGFR1-225ENST00000524528 ST5P78524 1137 aa13.5□□□□□ -0.25
FGFR1-225ENST00000524528 CFAP53Q96M91 514 aa13.5□□□□□ -0.25
FGFR1-225ENST00000524528 PLEKHF1Q96S99 279 aa13.5□□□□□ -0.25
FGFR1-225ENST00000524528 TAF1DQ9H5J8 278 aaPredicted RBP13.5□□□□□ -0.25
FGFR1-225ENST00000524528 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
FGFR1-225ENST00000524528 HTATSF1O43719 755 aaKnown RBP13.49□□□□□ -0.25
FGFR1-225ENST00000524528 NPR1P16066 1061 aa13.49□□□□□ -0.25
FGFR1-225ENST00000524528 TPTE2Q6XPS3 522 aa13.49□□□□□ -0.25
FGFR1-225ENST00000524528 C3orf67Q6ZVT6 689 aa13.49□□□□□ -0.25
FGFR1-225ENST00000524528 NUTM1Q86Y26 1132 aa13.49□□□□□ -0.25
FGFR1-225ENST00000524528 SYNE4Q8N205 404 aa13.49□□□□□ -0.25
FGFR1-225ENST00000524528 RTF1Q92541 710 aaKnown RBP13.49□□□□□ -0.25
FGFR1-225ENST00000524528 TIAM2Q8IVF5 1701 aa13.49□□□□□ -0.25
FGFR1-225ENST00000524528 PASKQ96RG2 1323 aa13.48□□□□□ -0.25
FGFR1-225ENST00000524528 NPHP1O15259 732 aa13.48□□□□□ -0.25
FGFR1-225ENST00000524528 EIF4A1P60842 406 aaKnown RBP13.48□□□□□ -0.25
FGFR1-225ENST00000524528 FKBP4Q02790 459 aaKnown RBP eCLIP13.48□□□□□ -0.25
FGFR1-225ENST00000524528 TNS4Q8IZW8 715 aa13.48□□□□□ -0.25
FGFR1-225ENST00000524528 L3MBTL3Q96JM7 780 aaPredicted RBP13.48□□□□□ -0.25
FGFR1-225ENST00000524528 DICER1Q9UPY3 1922 aaKnown RBP13.48□□□□□ -0.25
FGFR1-225ENST00000524528 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
FGFR1-225ENST00000524528 CACNA1SQ13698 1873 aa13.47□□□□□ -0.25
FGFR1-225ENST00000524528 FMR1Q06787 632 aaKnown RBP eCLIP13.47□□□□□ -0.25
FGFR1-225ENST00000524528 CCDC93Q567U6 631 aa13.47□□□□□ -0.25
FGFR1-225ENST00000524528 SUSD4Q5VX71 490 aa13.47□□□□□ -0.25
FGFR1-225ENST00000524528 NPM2Q86SE8 214 aaKnown RBP13.47□□□□□ -0.25
FGFR1-225ENST00000524528 RRP7AQ9Y3A4 280 aaKnown RBP13.47□□□□□ -0.25
FGFR1-225ENST00000524528 ABCC12Q96J65 1359 aa13.46□□□□□ -0.25
FGFR1-225ENST00000524528 FZD9O00144 591 aa13.46□□□□□ -0.25
FGFR1-225ENST00000524528 CREBZFQ9NS37 354 aa13.46□□□□□ -0.25
FGFR1-225ENST00000524528 COL4A5P29400 1685 aa13.46□□□□□ -0.26
FGFR1-225ENST00000524528 BCORQ6W2J9 1755 aa13.45□□□□□ -0.26
FGFR1-225ENST00000524528 UBN2Q6ZU65 1347 aa13.45□□□□□ -0.26
FGFR1-225ENST00000524528 GPTP24298 496 aa13.45□□□□□ -0.26
FGFR1-225ENST00000524528 CRY2Q49AN0 593 aa13.45□□□□□ -0.26
FGFR1-225ENST00000524528 SOGA3Q5TF21 947 aa13.45□□□□□ -0.26
FGFR1-225ENST00000524528 LRP10Q7Z4F1 713 aa13.45□□□□□ -0.26
FGFR1-225ENST00000524528 RGL2O15211 777 aa13.44□□□□□ -0.26
FGFR1-225ENST00000524528 FOXN1O15353 648 aa13.44□□□□□ -0.26
FGFR1-225ENST00000524528 MYL6BP14649 208 aa13.44□□□□□ -0.26
FGFR1-225ENST00000524528 IARSP41252 1262 aaKnown RBP13.44□□□□□ -0.26
FGFR1-225ENST00000524528 VEGFBP49765 207 aa13.44□□□□□ -0.26
FGFR1-225ENST00000524528 PDIA6Q15084 440 aa13.44□□□□□ -0.26
FGFR1-225ENST00000524528 ZNF34Q8IZ26 560 aa13.44□□□□□ -0.26
FGFR1-225ENST00000524528 ZBTB3Q9H5J0 574 aa13.44□□□□□ -0.26
FGFR1-225ENST00000524528 ZNF652Q9Y2D9 606 aa13.44□□□□□ -0.26
FGFR1-225ENST00000524528 MAP3K15Q6ZN16 1313 aa13.43□□□□□ -0.26
FGFR1-225ENST00000524528 ERVV-1B6SEH8 477 aa13.43□□□□□ -0.26
FGFR1-225ENST00000524528 TCERG1O14776 1098 aaKnown RBP13.43□□□□□ -0.26
FGFR1-225ENST00000524528 HOXA10P31260 410 aaPredicted RBP13.43□□□□□ -0.26
FGFR1-225ENST00000524528 EAPPQ56P03 285 aaPredicted RBP13.43□□□□□ -0.26
FGFR1-225ENST00000524528 MAP1SQ66K74 1059 aaPredicted RBP13.43□□□□□ -0.26
FGFR1-225ENST00000524528 LDHDQ86WU2 507 aa13.43□□□□□ -0.26
FGFR1-225ENST00000524528 RTKN2Q8IZC4 609 aa13.43□□□□□ -0.26
FGFR1-225ENST00000524528 RNF123Q5XPI4 1314 aa13.42□□□□□ -0.26
FGFR1-225ENST00000524528 ANXA1P04083 346 aa13.42□□□□□ -0.26
FGFR1-225ENST00000524528 ALDH1B1P30837 517 aa13.42□□□□□ -0.26
FGFR1-225ENST00000524528 EPHX2P34913 555 aa13.42□□□□□ -0.26
FGFR1-225ENST00000524528 NFE2L2Q16236 605 aa13.42□□□□□ -0.26
FGFR1-225ENST00000524528 PROSER3Q2NL68 480 aa13.42□□□□□ -0.26
FGFR1-225ENST00000524528 CNTNAP1P78357 1384 aa13.42□□□□□ -0.26
FGFR1-225ENST00000524528 NTSR2O95665 410 aa13.41□□□□□ -0.26
FGFR1-225ENST00000524528 GTF2E1P29083 439 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms