RNA–Protein interactions for RNA: ENST00000524347.2

SGCD-204, Transcript of sarcoglycan delta, humanhuman

TSL 5

Gene SGCD, Length 739 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCD-204ENST00000524347 USP16Q9Y5T5 823 aa16.54■□□□□ 0.24
SGCD-204ENST00000524347 PARP3Q9Y6F1 533 aa16.54■□□□□ 0.24
SGCD-204ENST00000524347 POLRMTO00411 1230 aaKnown RBP16.53■□□□□ 0.24
SGCD-204ENST00000524347 ZPR1O75312 459 aa16.53■□□□□ 0.24
SGCD-204ENST00000524347 EIF5P55010 431 aaKnown RBP16.53■□□□□ 0.24
SGCD-204ENST00000524347 BCAR3O75815 825 aa16.52■□□□□ 0.24
SGCD-204ENST00000524347 STARD3NLO95772 234 aa16.52■□□□□ 0.24
SGCD-204ENST00000524347 DPEP1P16444 411 aa16.52■□□□□ 0.24
SGCD-204ENST00000524347 TM4SF1P30408 202 aa16.52■□□□□ 0.24
SGCD-204ENST00000524347 NFIXQ14938 502 aa16.52■□□□□ 0.24
SGCD-204ENST00000524347 ALDH1L2Q3SY69 923 aa16.52■□□□□ 0.24
SGCD-204ENST00000524347 NRXN2Q9P2S2 1712 aa16.52■□□□□ 0.24
SGCD-204ENST00000524347 BCORQ6W2J9 1755 aa16.51■□□□□ 0.23
SGCD-204ENST00000524347 HOXB7P09629 217 aa16.51■□□□□ 0.23
SGCD-204ENST00000524347 BRPF1P55201 1214 aaPredicted RBP16.51■□□□□ 0.23
SGCD-204ENST00000524347 SSH1Q8WYL5 1049 aa16.51■□□□□ 0.23
SGCD-204ENST00000524347 TBC1D2BQ9UPU7 963 aa16.51■□□□□ 0.23
SGCD-204ENST00000524347 CARMIL3Q8ND23 1372 aa16.51■□□□□ 0.23
SGCD-204ENST00000524347 CHRNA5P30532 468 aa16.5■□□□□ 0.23
SGCD-204ENST00000524347 BICDL1Q6ZP65 573 aa16.5■□□□□ 0.23
SGCD-204ENST00000524347 GRIN3BO60391 1043 aa16.49■□□□□ 0.23
SGCD-204ENST00000524347 KCNA3P22001 575 aa16.49■□□□□ 0.23
SGCD-204ENST00000524347 BCL2L13Q9BXK5 485 aa16.49■□□□□ 0.23
SGCD-204ENST00000524347 KIF16BQ96L93 1317 aa16.48■□□□□ 0.23
SGCD-204ENST00000524347 TBC1D9BQ66K14 1250 aa16.48■□□□□ 0.23
SGCD-204ENST00000524347 SMC4Q9NTJ3 1288 aa16.48■□□□□ 0.23
SGCD-204ENST00000524347 BCS1LQ9Y276 419 aa16.48■□□□□ 0.23
SGCD-204ENST00000524347 ANKRD31Q8N7Z5 1873 aa16.48■□□□□ 0.23
SGCD-204ENST00000524347 NBPF26B4DH59 902 aa16.47■□□□□ 0.23
SGCD-204ENST00000524347 ELL2O00472 640 aaPredicted RBP16.47■□□□□ 0.23
SGCD-204ENST00000524347 IL6STP40189 918 aaPredicted RBP16.47■□□□□ 0.23
SGCD-204ENST00000524347 TGFB2P61812 414 aa16.47■□□□□ 0.23
SGCD-204ENST00000524347 NBPF10Q6P3W6 841 aaKnown RBP16.47■□□□□ 0.23
SGCD-204ENST00000524347 CCDC24Q8N4L8 307 aa16.47■□□□□ 0.23
SGCD-204ENST00000524347 MRPL50Q8N5N7 158 aaKnown RBP16.47■□□□□ 0.23
SGCD-204ENST00000524347 NBPF15Q8N660 670 aa16.47■□□□□ 0.23
SGCD-204ENST00000524347 TEX13AQ9BXU3 409 aaPredicted RBP16.47■□□□□ 0.23
SGCD-204ENST00000524347 PLIN1O60240 522 aa16.46■□□□□ 0.23
SGCD-204ENST00000524347 GIGYF1O75420 1035 aaPredicted RBP16.46■□□□□ 0.23
SGCD-204ENST00000524347 CAMTA2O94983 1202 aa16.46■□□□□ 0.23
SGCD-204ENST00000524347 SNRPA1P09661 255 aaKnown RBP16.46■□□□□ 0.23
SGCD-204ENST00000524347 COL11A2P13942 1736 aaPredicted RBP16.45■□□□□ 0.22
SGCD-204ENST00000524347 ARFGEF1Q9Y6D6 1849 aa16.45■□□□□ 0.22
SGCD-204ENST00000524347 SERPINB2P05120 415 aa16.45■□□□□ 0.22
SGCD-204ENST00000524347 ATP10DQ9P241 1426 aa16.45■□□□□ 0.22
SGCD-204ENST00000524347 DLEC1Q9Y238 1755 aa16.44■□□□□ 0.22
SGCD-204ENST00000524347 ARFGEF2Q9Y6D5 1785 aa16.44■□□□□ 0.22
SGCD-204ENST00000524347 C20orf194Q5TEA3 1177 aa16.44■□□□□ 0.22
SGCD-204ENST00000524347 DZIP3Q86Y13 1208 aaKnown RBP16.44■□□□□ 0.22
SGCD-204ENST00000524347 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
SGCD-204ENST00000524347 GTF3C3Q9Y5Q9 886 aa16.44■□□□□ 0.22
SGCD-204ENST00000524347 ADCY9O60503 1353 aa16.43■□□□□ 0.22
SGCD-204ENST00000524347 A0A087WZG4 1122 aa16.43■□□□□ 0.22
SGCD-204ENST00000524347 IRX6P78412 446 aaPredicted RBP16.43■□□□□ 0.22
SGCD-204ENST00000524347 NEFLP07196 543 aa16.42■□□□□ 0.22
SGCD-204ENST00000524347 HDGFL1Q5TGJ6 251 aa16.42■□□□□ 0.22
SGCD-204ENST00000524347 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.42■□□□□ 0.22
SGCD-204ENST00000524347 ZNF526Q8TF50 670 aaPredicted RBP16.42■□□□□ 0.22
SGCD-204ENST00000524347 ABCC4O15439 1325 aa16.42■□□□□ 0.22
SGCD-204ENST00000524347 TCERG1O14776 1098 aaKnown RBP16.41■□□□□ 0.22
SGCD-204ENST00000524347 TRIM27P14373 513 aa16.41■□□□□ 0.22
SGCD-204ENST00000524347 CACNA1SQ13698 1873 aa16.4■□□□□ 0.22
SGCD-204ENST00000524347 RLBP1P12271 317 aa16.4■□□□□ 0.22
SGCD-204ENST00000524347 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
SGCD-204ENST00000524347 CCDC30Q5VVM6 783 aa16.4■□□□□ 0.22
SGCD-204ENST00000524347 PRR5LQ6MZQ0 368 aa16.4■□□□□ 0.22
SGCD-204ENST00000524347 ARHGAP27Q6ZUM4 889 aa16.4■□□□□ 0.22
SGCD-204ENST00000524347 PIM2Q9P1W9 311 aa16.4■□□□□ 0.22
SGCD-204ENST00000524347 HLFQ16534 295 aa16.39■□□□□ 0.21
SGCD-204ENST00000524347 ZKSCAN2Q63HK3 967 aa16.39■□□□□ 0.21
SGCD-204ENST00000524347 ATF7IPQ6VMQ6 1270 aa16.39■□□□□ 0.21
SGCD-204ENST00000524347 LRP10Q7Z4F1 713 aa16.39■□□□□ 0.21
SGCD-204ENST00000524347 ARHGAP45Q92619 1136 aa16.39■□□□□ 0.21
SGCD-204ENST00000524347 NOB1Q9ULX3 412 aaKnown RBP16.39■□□□□ 0.21
SGCD-204ENST00000524347 MYL6BP14649 208 aa16.38■□□□□ 0.21
SGCD-204ENST00000524347 PDIA6Q15084 440 aa16.38■□□□□ 0.21
SGCD-204ENST00000524347 DALRD3Q5D0E6 543 aaKnown RBP16.38■□□□□ 0.21
SGCD-204ENST00000524347 NPM2Q86SE8 214 aaKnown RBP16.38■□□□□ 0.21
SGCD-204ENST00000524347 C2CD5Q86YS7 1000 aa16.38■□□□□ 0.21
SGCD-204ENST00000524347 FRAT1Q92837 279 aaPredicted RBP16.38■□□□□ 0.21
SGCD-204ENST00000524347 CHPF2Q9P2E5 772 aa16.38■□□□□ 0.21
SGCD-204ENST00000524347 PTPRCP08575 1304 aa16.38■□□□□ 0.21
SGCD-204ENST00000524347 ERBB4Q15303 1308 aa16.38■□□□□ 0.21
SGCD-204ENST00000524347 ANKRD36CQ5JPF3 1778 aa16.37■□□□□ 0.21
SGCD-204ENST00000524347 ANXA1P04083 346 aa16.37■□□□□ 0.21
SGCD-204ENST00000524347 PROSER3Q2NL68 480 aa16.37■□□□□ 0.21
SGCD-204ENST00000524347 ERICH6BQ5W0A0 696 aa16.37■□□□□ 0.21
SGCD-204ENST00000524347 TTLL7Q6ZT98 887 aa16.37■□□□□ 0.21
SGCD-204ENST00000524347 G2E3Q7L622 706 aa16.37■□□□□ 0.21
SGCD-204ENST00000524347 CRBNQ96SW2 442 aa16.37■□□□□ 0.21
SGCD-204ENST00000524347 NUP98P52948 1817 aa16.37■□□□□ 0.21
SGCD-204ENST00000524347 SBF1O95248 1867 aa16.37■□□□□ 0.21
SGCD-204ENST00000524347 FAM177BA6PVY3 158 aa16.36■□□□□ 0.21
SGCD-204ENST00000524347 RASSF7Q02833 373 aa16.36■□□□□ 0.21
SGCD-204ENST00000524347 PANK1Q8TE04 598 aa16.36■□□□□ 0.21
SGCD-204ENST00000524347 NECTIN2Q92692 538 aa16.36■□□□□ 0.21
SGCD-204ENST00000524347 SETDB2Q96T68 719 aa16.36■□□□□ 0.21
SGCD-204ENST00000524347 STK31Q9BXU1 1019 aa16.36■□□□□ 0.21
SGCD-204ENST00000524347 TNRC6CQ9HCJ0 1690 aaKnown RBP16.35■□□□□ 0.21
SGCD-204ENST00000524347 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms