RNA–Protein interactions for RNA: ENST00000524334.1

HDAC2-217, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-217ENST00000524334 TPTE2Q6XPS3 522 aa16.64■□□□□ 0.25
HDAC2-217ENST00000524334 CNBD1Q8NA66 436 aa16.64■□□□□ 0.25
HDAC2-217ENST00000524334 DDX21Q9NR30 783 aaKnown RBP eCLIP16.64■□□□□ 0.25
HDAC2-217ENST00000524334 NIP7Q9Y221 180 aaKnown RBP eCLIP16.64■□□□□ 0.25
HDAC2-217ENST00000524334 BCS1LQ9Y276 419 aa16.64■□□□□ 0.25
HDAC2-217ENST00000524334 GOLGB1Q14789 3259 aaKnown RBP16.63■□□□□ 0.25
HDAC2-217ENST00000524334 ST5P78524 1137 aa16.63■□□□□ 0.25
HDAC2-217ENST00000524334 HLFQ16534 295 aa16.63■□□□□ 0.25
HDAC2-217ENST00000524334 KRT24Q2M2I5 525 aa16.63■□□□□ 0.25
HDAC2-217ENST00000524334 DALRD3Q5D0E6 543 aaKnown RBP16.63■□□□□ 0.25
HDAC2-217ENST00000524334 HDGFL1Q5TGJ6 251 aa16.63■□□□□ 0.25
HDAC2-217ENST00000524334 PRR5LQ6MZQ0 368 aa16.63■□□□□ 0.25
HDAC2-217ENST00000524334 TTLL7Q6ZT98 887 aa16.63■□□□□ 0.25
HDAC2-217ENST00000524334 NBPF5PQ86XG9 351 aaPredicted RBP16.63■□□□□ 0.25
HDAC2-217ENST00000524334 NECTIN2Q92692 538 aa16.63■□□□□ 0.25
HDAC2-217ENST00000524334 DBF4Q9UBU7 674 aaPredicted RBP16.63■□□□□ 0.25
HDAC2-217ENST00000524334 WWC3Q9ULE0 1092 aa16.63■□□□□ 0.25
HDAC2-217ENST00000524334 IL16Q14005 1332 aa16.63■□□□□ 0.25
HDAC2-217ENST00000524334 CHRNA5P30532 468 aa16.62■□□□□ 0.25
HDAC2-217ENST00000524334 LRP10Q7Z4F1 713 aa16.62■□□□□ 0.25
HDAC2-217ENST00000524334 GIGYF2Q6Y7W6 1299 aaKnown RBP16.61■□□□□ 0.25
HDAC2-217ENST00000524334 COPS6Q7L5N1 327 aa16.61■□□□□ 0.25
HDAC2-217ENST00000524334 C2CD5Q86YS7 1000 aa16.61■□□□□ 0.25
HDAC2-217ENST00000524334 WDR63Q8IWG1 891 aa16.61■□□□□ 0.25
HDAC2-217ENST00000524334 ZBTB3Q9H5J0 574 aa16.61■□□□□ 0.25
HDAC2-217ENST00000524334 GTF2E1P29083 439 aaPredicted RBP16.6■□□□□ 0.25
HDAC2-217ENST00000524334 PROSER3Q2NL68 480 aa16.6■□□□□ 0.25
HDAC2-217ENST00000524334 NYXQ9GZU5 481 aa16.6■□□□□ 0.25
HDAC2-217ENST00000524334 HYPKQ9NX55 129 aa16.6■□□□□ 0.25
HDAC2-217ENST00000524334 TTLL6Q8N841 843 aa16.59■□□□□ 0.25
HDAC2-217ENST00000524334 XAGE3Q8WTP9 111 aa16.59■□□□□ 0.25
HDAC2-217ENST00000524334 CHPF2Q9P2E5 772 aa16.59■□□□□ 0.25
HDAC2-217ENST00000524334 UTRNP46939 3433 aa16.58■□□□□ 0.24
HDAC2-217ENST00000524334 SENP3-EIF4A1A0A087X0R7 540 aa16.58■□□□□ 0.24
HDAC2-217ENST00000524334 CCER2I3L3R5 266 aa16.58■□□□□ 0.24
HDAC2-217ENST00000524334 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
HDAC2-217ENST00000524334 ANXA1P04083 346 aa16.58■□□□□ 0.24
HDAC2-217ENST00000524334 AIMP1Q12904 312 aaKnown RBP16.58■□□□□ 0.24
HDAC2-217ENST00000524334 HSP90AB3PQ58FF7 597 aa16.58■□□□□ 0.24
HDAC2-217ENST00000524334 ARHGAP27Q6ZUM4 889 aa16.58■□□□□ 0.24
HDAC2-217ENST00000524334 ZNF34Q8IZ26 560 aa16.58■□□□□ 0.24
HDAC2-217ENST00000524334 C8orf58Q8NAV2 365 aa16.58■□□□□ 0.24
HDAC2-217ENST00000524334 SALL2Q9Y467 1007 aaPredicted RBP16.58■□□□□ 0.24
HDAC2-217ENST00000524334 SCN7AQ01118 1682 aa16.57■□□□□ 0.24
HDAC2-217ENST00000524334 ATP10DQ9P241 1426 aa16.57■□□□□ 0.24
HDAC2-217ENST00000524334 PARP10Q53GL7 1025 aa16.57■□□□□ 0.24
HDAC2-217ENST00000524334 CCDC30Q5VVM6 783 aa16.57■□□□□ 0.24
HDAC2-217ENST00000524334 CCDC24Q8N4L8 307 aa16.57■□□□□ 0.24
HDAC2-217ENST00000524334 LAMB4A4D0S4 1761 aa16.56■□□□□ 0.24
HDAC2-217ENST00000524334 KLRG2A4D1S0 409 aaPredicted RBP16.56■□□□□ 0.24
HDAC2-217ENST00000524334 FAM177BA6PVY3 158 aa16.56■□□□□ 0.24
HDAC2-217ENST00000524334 ANKRD13DQ6ZTN6 518 aa16.56■□□□□ 0.24
HDAC2-217ENST00000524334 PPP1R42Q7Z4L9 355 aa16.56■□□□□ 0.24
HDAC2-217ENST00000524334 TSR2Q969E8 191 aaKnown RBP16.56■□□□□ 0.24
HDAC2-217ENST00000524334 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
HDAC2-217ENST00000524334 SRGNP10124 158 aa16.55■□□□□ 0.24
HDAC2-217ENST00000524334 GPTP24298 496 aa16.55■□□□□ 0.24
HDAC2-217ENST00000524334 STYK1Q6J9G0 422 aa16.55■□□□□ 0.24
HDAC2-217ENST00000524334 PLBD2Q8NHP8 589 aa16.55■□□□□ 0.24
HDAC2-217ENST00000524334 CNKSR1Q969H4 720 aa16.55■□□□□ 0.24
HDAC2-217ENST00000524334 ZNF622Q969S3 477 aaKnown RBP eCLIP16.55■□□□□ 0.24
HDAC2-217ENST00000524334 NRXN2Q9P2S2 1712 aa16.54■□□□□ 0.24
HDAC2-217ENST00000524334 GOLGA2Q08379 1002 aa16.54■□□□□ 0.24
HDAC2-217ENST00000524334 TCIRG1Q13488 830 aa16.54■□□□□ 0.24
HDAC2-217ENST00000524334 SUSD4Q5VX71 490 aa16.54■□□□□ 0.24
HDAC2-217ENST00000524334 MASTLQ96GX5 879 aa16.54■□□□□ 0.24
HDAC2-217ENST00000524334 IBTKQ9P2D0 1353 aaPredicted RBP16.53■□□□□ 0.24
HDAC2-217ENST00000524334 NPR1P16066 1061 aa16.53■□□□□ 0.24
HDAC2-217ENST00000524334 TWISTNBQ3B726 338 aaPredicted RBP16.53■□□□□ 0.24
HDAC2-217ENST00000524334 TSPYL6Q8N831 410 aa16.53■□□□□ 0.24
HDAC2-217ENST00000524334 ZNF784Q8NCA9 323 aaPredicted RBP16.53■□□□□ 0.24
HDAC2-217ENST00000524334 MYH16Q9H6N6 1097 aa16.53■□□□□ 0.24
HDAC2-217ENST00000524334 RNF123Q5XPI4 1314 aa16.52■□□□□ 0.24
HDAC2-217ENST00000524334 UBN2Q6ZU65 1347 aa16.52■□□□□ 0.24
HDAC2-217ENST00000524334 ERFEQ4G0M1 354 aa16.52■□□□□ 0.24
HDAC2-217ENST00000524334 UTP14AQ9BVJ6 771 aaKnown RBP16.52■□□□□ 0.24
HDAC2-217ENST00000524334 STK31Q9BXU1 1019 aa16.52■□□□□ 0.24
HDAC2-217ENST00000524334 NTSR2O95665 410 aa16.51■□□□□ 0.23
HDAC2-217ENST00000524334 DDX58O95786 925 aaKnown RBP16.51■□□□□ 0.23
HDAC2-217ENST00000524334 ALDH1B1P30837 517 aa16.51■□□□□ 0.23
HDAC2-217ENST00000524334 DIEXFQ68CQ4 756 aaKnown RBP16.51■□□□□ 0.23
HDAC2-217ENST00000524334 BCORQ6W2J9 1755 aa16.51■□□□□ 0.23
HDAC2-217ENST00000524334 KIAA1551Q9HCM1 1747 aa16.5■□□□□ 0.23
HDAC2-217ENST00000524334 FANCIQ9NVI1 1328 aa16.5■□□□□ 0.23
HDAC2-217ENST00000524334 SLC10A5Q5PT55 438 aa16.5■□□□□ 0.23
HDAC2-217ENST00000524334 RIC3Q7Z5B4 369 aa16.5■□□□□ 0.23
HDAC2-217ENST00000524334 NLRP10Q86W26 655 aa16.5■□□□□ 0.23
HDAC2-217ENST00000524334 NUTM1Q86Y26 1132 aa16.5■□□□□ 0.23
HDAC2-217ENST00000524334 TRIM28Q13263 835 aaKnown RBP16.49■□□□□ 0.23
HDAC2-217ENST00000524334 CRY2Q49AN0 593 aa16.49■□□□□ 0.23
HDAC2-217ENST00000524334 SOGA3Q5TF21 947 aa16.49■□□□□ 0.23
HDAC2-217ENST00000524334 NLRP3Q96P20 1036 aa16.49■□□□□ 0.23
HDAC2-217ENST00000524334 PHAXQ9H814 394 aaKnown RBP16.49■□□□□ 0.23
HDAC2-217ENST00000524334 TRMT112Q9UI30 125 aaKnown RBP16.49■□□□□ 0.23
HDAC2-217ENST00000524334 C21orf2O43822 256 aa16.48■□□□□ 0.23
HDAC2-217ENST00000524334 PRPF40BQ6NWY9 871 aaKnown RBP16.48■□□□□ 0.23
HDAC2-217ENST00000524334 ISCA1Q9BUE6 129 aa16.48■□□□□ 0.23
HDAC2-217ENST00000524334 N4BP2Q86UW6 1770 aaPredicted RBP16.48■□□□□ 0.23
HDAC2-217ENST00000524334 RIC1Q4ADV7 1423 aa16.47■□□□□ 0.23
HDAC2-217ENST00000524334 SLC4A2P04920 1241 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms