RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 SERPINB2P05120 415 aa21.49■■□□□ 1.03
CSGALNACT1-216ENST00000524213 DPEP1P16444 411 aa21.49■■□□□ 1.03
CSGALNACT1-216ENST00000524213 DUSP27Q5VZP5 1158 aa21.49■■□□□ 1.03
CSGALNACT1-216ENST00000524213 NUP98P52948 1817 aa21.48■■□□□ 1.03
CSGALNACT1-216ENST00000524213 GRIN3BO60391 1043 aa21.48■■□□□ 1.03
CSGALNACT1-216ENST00000524213 DLEC1Q9Y238 1755 aa21.48■■□□□ 1.03
CSGALNACT1-216ENST00000524213 KRT24Q2M2I5 525 aa21.47■■□□□ 1.03
CSGALNACT1-216ENST00000524213 ARFGEF1Q9Y6D6 1849 aa21.47■■□□□ 1.03
CSGALNACT1-216ENST00000524213 HDGFL1Q5TGJ6 251 aa21.46■■□□□ 1.03
CSGALNACT1-216ENST00000524213 MYH16Q9H6N6 1097 aa21.46■■□□□ 1.03
CSGALNACT1-216ENST00000524213 CARMIL3Q8ND23 1372 aa21.46■■□□□ 1.03
CSGALNACT1-216ENST00000524213 RGL2O15211 777 aa21.45■■□□□ 1.02
CSGALNACT1-216ENST00000524213 KCNA3P22001 575 aa21.45■■□□□ 1.02
CSGALNACT1-216ENST00000524213 TSR2Q969E8 191 aaKnown RBP21.45■■□□□ 1.02
CSGALNACT1-216ENST00000524213 ZNF521Q96K83 1311 aa21.45■■□□□ 1.02
CSGALNACT1-216ENST00000524213 MYL6BP14649 208 aa21.44■■□□□ 1.02
CSGALNACT1-216ENST00000524213 GOLGA2Q08379 1002 aa21.44■■□□□ 1.02
CSGALNACT1-216ENST00000524213 DDX21Q9NR30 783 aaKnown RBP eCLIP21.44■■□□□ 1.02
CSGALNACT1-216ENST00000524213 ZNF652Q9Y2D9 606 aa21.44■■□□□ 1.02
CSGALNACT1-216ENST00000524213 CHRNA5P30532 468 aa21.43■■□□□ 1.02
CSGALNACT1-216ENST00000524213 CLEC4GQ6UXB4 293 aa21.43■■□□□ 1.02
CSGALNACT1-216ENST00000524213 SETDB2Q96T68 719 aa21.43■■□□□ 1.02
CSGALNACT1-216ENST00000524213 ELL2O00472 640 aaPredicted RBP21.42■■□□□ 1.02
CSGALNACT1-216ENST00000524213 COL11A2P13942 1736 aaPredicted RBP21.42■■□□□ 1.02
CSGALNACT1-216ENST00000524213 PDIA6Q15084 440 aa21.42■■□□□ 1.02
CSGALNACT1-216ENST00000524213 KIF6Q6ZMV9 814 aa21.42■■□□□ 1.02
CSGALNACT1-216ENST00000524213 TTLL7Q6ZT98 887 aa21.42■■□□□ 1.02
CSGALNACT1-216ENST00000524213 C8orf58Q8NAV2 365 aa21.42■■□□□ 1.02
CSGALNACT1-216ENST00000524213 NECTIN2Q92692 538 aa21.42■■□□□ 1.02
CSGALNACT1-216ENST00000524213 FANCIQ9NVI1 1328 aa21.42■■□□□ 1.02
CSGALNACT1-216ENST00000524213 DBF4Q9UBU7 674 aaPredicted RBP21.42■■□□□ 1.02
CSGALNACT1-216ENST00000524213 BCS1LQ9Y276 419 aa21.42■■□□□ 1.02
CSGALNACT1-216ENST00000524213 HLFQ16534 295 aa21.41■■□□□ 1.02
CSGALNACT1-216ENST00000524213 PRR5LQ6MZQ0 368 aa21.41■■□□□ 1.02
CSGALNACT1-216ENST00000524213 CCDC24Q8N4L8 307 aa21.41■■□□□ 1.02
CSGALNACT1-216ENST00000524213 ERVV-1B6SEH8 477 aa21.4■■□□□ 1.02
CSGALNACT1-216ENST00000524213 PROSER3Q2NL68 480 aa21.4■■□□□ 1.02
CSGALNACT1-216ENST00000524213 TWISTNBQ3B726 338 aaPredicted RBP21.4■■□□□ 1.02
CSGALNACT1-216ENST00000524213 CCDC30Q5VVM6 783 aa21.4■■□□□ 1.02
CSGALNACT1-216ENST00000524213 CACNA1SQ13698 1873 aa21.39■■□□□ 1.02
CSGALNACT1-216ENST00000524213 MAP3K15Q6ZN16 1313 aa21.39■■□□□ 1.01
CSGALNACT1-216ENST00000524213 E9PSI1 815 aa21.39■■□□□ 1.01
CSGALNACT1-216ENST00000524213 ANXA1P04083 346 aa21.39■■□□□ 1.01
CSGALNACT1-216ENST00000524213 LRP10Q7Z4F1 713 aa21.39■■□□□ 1.01
CSGALNACT1-216ENST00000524213 HYPKQ9NX55 129 aa21.39■■□□□ 1.01
CSGALNACT1-216ENST00000524213 PIM2Q9P1W9 311 aa21.39■■□□□ 1.01
CSGALNACT1-216ENST00000524213 CHPF2Q9P2E5 772 aa21.39■■□□□ 1.01
CSGALNACT1-216ENST00000524213 TSPYL6Q8N831 410 aa21.38■■□□□ 1.01
CSGALNACT1-216ENST00000524213 CNBD1Q8NA66 436 aa21.38■■□□□ 1.01
CSGALNACT1-216ENST00000524213 SPINK5Q9NQ38 1064 aaPredicted RBP21.38■■□□□ 1.01
CSGALNACT1-216ENST00000524213 NIP7Q9Y221 180 aaKnown RBP eCLIP21.38■■□□□ 1.01
CSGALNACT1-216ENST00000524213 ZBTB3Q9H5J0 574 aa21.37■■□□□ 1.01
CSGALNACT1-216ENST00000524213 ANKRD36CQ5JPF3 1778 aa21.37■■□□□ 1.01
CSGALNACT1-216ENST00000524213 EXOSC9Q06265 439 aaKnown RBP21.36■■□□□ 1.01
CSGALNACT1-216ENST00000524213 DALRD3Q5D0E6 543 aaKnown RBP21.36■■□□□ 1.01
CSGALNACT1-216ENST00000524213 COPS6Q7L5N1 327 aa21.36■■□□□ 1.01
CSGALNACT1-216ENST00000524213 C2CD5Q86YS7 1000 aa21.36■■□□□ 1.01
CSGALNACT1-216ENST00000524213 BRIP1Q9BX63 1249 aa21.36■■□□□ 1.01
CSGALNACT1-216ENST00000524213 STK31Q9BXU1 1019 aa21.36■■□□□ 1.01
CSGALNACT1-216ENST00000524213 NPHP1O15259 732 aa21.35■■□□□ 1.01
CSGALNACT1-216ENST00000524213 NBPF5PQ86XG9 351 aaPredicted RBP21.35■■□□□ 1.01
CSGALNACT1-216ENST00000524213 XAGE3Q8WTP9 111 aa21.35■■□□□ 1.01
CSGALNACT1-216ENST00000524213 FAM177BA6PVY3 158 aa21.34■■□□□ 1.01
CSGALNACT1-216ENST00000524213 H0YIN7 160 aa21.34■■□□□ 1.01
CSGALNACT1-216ENST00000524213 ST5P78524 1137 aa21.34■■□□□ 1.01
CSGALNACT1-216ENST00000524213 SLFN5Q08AF3 891 aa21.34■■□□□ 1.01
CSGALNACT1-216ENST00000524213 AIMP1Q12904 312 aaKnown RBP21.34■■□□□ 1.01
CSGALNACT1-216ENST00000524213 GIGYF2Q6Y7W6 1299 aaKnown RBP21.34■■□□□ 1.01
CSGALNACT1-216ENST00000524213 ZNF784Q8NCA9 323 aaPredicted RBP21.34■■□□□ 1.01
CSGALNACT1-216ENST00000524213 ATP10DQ9P241 1426 aa21.34■■□□□ 1.01
CSGALNACT1-216ENST00000524213 ARFGEF2Q9Y6D5 1785 aa21.33■■□□□ 1.01
CSGALNACT1-216ENST00000524213 VAMP4O75379 141 aa21.33■■□□□ 1.01
CSGALNACT1-216ENST00000524213 PDE6BP35913 854 aa21.33■■□□□ 1.01
CSGALNACT1-216ENST00000524213 TNRC6CQ9HCJ0 1690 aaKnown RBP21.32■■□□□ 1
CSGALNACT1-216ENST00000524213 HNRNPUQ00839 825 aaKnown RBP eCLIP21.32■■□□□ 1
CSGALNACT1-216ENST00000524213 HSP90AB3PQ58FF7 597 aa21.32■■□□□ 1
CSGALNACT1-216ENST00000524213 ARHGAP27Q6ZUM4 889 aa21.32■■□□□ 1
CSGALNACT1-216ENST00000524213 SBF1O95248 1867 aa21.32■■□□□ 1
CSGALNACT1-216ENST00000524213 GPTP24298 496 aa21.31■■□□□ 1
CSGALNACT1-216ENST00000524213 TPTE2Q6XPS3 522 aa21.31■■□□□ 1
CSGALNACT1-216ENST00000524213 PLBD2Q8NHP8 589 aa21.31■■□□□ 1
CSGALNACT1-216ENST00000524213 SLX4Q8IY92 1834 aa21.3■■□□□ 1
CSGALNACT1-216ENST00000524213 ANKRD13DQ6ZTN6 518 aa21.3■■□□□ 1
CSGALNACT1-216ENST00000524213 TTLL6Q8N841 843 aa21.3■■□□□ 1
CSGALNACT1-216ENST00000524213 PDZRN3Q9UPQ7 1066 aa21.3■■□□□ 1
CSGALNACT1-216ENST00000524213 UBN2Q6ZU65 1347 aa21.29■■□□□ 1
CSGALNACT1-216ENST00000524213 CCDC88AQ3V6T2 1871 aa21.29■■□□□ 1
CSGALNACT1-216ENST00000524213 ADCY9O60503 1353 aa21.29■■□□□ 1
CSGALNACT1-216ENST00000524213 DDX58O95786 925 aaKnown RBP21.29■■□□□ 1
CSGALNACT1-216ENST00000524213 ZNF34Q8IZ26 560 aa21.29■■□□□ 1
CSGALNACT1-216ENST00000524213 ZNF622Q969S3 477 aaKnown RBP eCLIP21.29■■□□□ 1
CSGALNACT1-216ENST00000524213 PARP10Q53GL7 1025 aa21.28■■□□□ 1
CSGALNACT1-216ENST00000524213 TRMT2AQ8IZ69 625 aaKnown RBP21.28■■□□□ 1
CSGALNACT1-216ENST00000524213 NYXQ9GZU5 481 aa21.28■■□□□ 1
CSGALNACT1-216ENST00000524213 PHAXQ9H814 394 aaKnown RBP21.28■■□□□ 1
CSGALNACT1-216ENST00000524213 ABCC12Q96J65 1359 aa21.27■■□□□ 1
CSGALNACT1-216ENST00000524213 SLC4A2P04920 1241 aa21.27■■□□□ 1
CSGALNACT1-216ENST00000524213 SUSD4Q5VX71 490 aa21.27■■□□□ 1
CSGALNACT1-216ENST00000524213 NUTM1Q86Y26 1132 aa21.27■■□□□ 1
CSGALNACT1-216ENST00000524213 CDCA7LQ96GN5 454 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms