RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 STARD3NLO95772 234 aa10.15□□□□□ -0.78
FAM49B-227ENST00000523514 MKRN3Q13064 507 aaKnown RBP10.15□□□□□ -0.78
FAM49B-227ENST00000523514 DCTN1Q14203 1278 aa10.15□□□□□ -0.78
FAM49B-227ENST00000523514 PDGFDQ9GZP0 370 aaPredicted RBP10.15□□□□□ -0.78
FAM49B-227ENST00000523514 BABAM1Q9NWV8 329 aa10.15□□□□□ -0.78
FAM49B-227ENST00000523514 TRIM35Q9UPQ4 493 aa10.15□□□□□ -0.78
FAM49B-227ENST00000523514 LAMB4A4D0S4 1761 aa10.15□□□□□ -0.78
FAM49B-227ENST00000523514 C4AP0C0L4 1744 aa10.14□□□□□ -0.79
FAM49B-227ENST00000523514 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.14□□□□□ -0.79
FAM49B-227ENST00000523514 RPS6KA4O75676 772 aa10.14□□□□□ -0.79
FAM49B-227ENST00000523514 POLD1P28340 1107 aa10.14□□□□□ -0.79
FAM49B-227ENST00000523514 CRKLP46109 303 aaKnown RBP10.14□□□□□ -0.79
FAM49B-227ENST00000523514 COL23A1Q86Y22 540 aaPredicted RBP10.14□□□□□ -0.79
FAM49B-227ENST00000523514 DNAJC10Q8IXB1 793 aa10.14□□□□□ -0.79
FAM49B-227ENST00000523514 ZNF496Q96IT1 587 aaPredicted RBP10.14□□□□□ -0.79
FAM49B-227ENST00000523514 CCDC87Q9NVE4 849 aa10.14□□□□□ -0.79
FAM49B-227ENST00000523514 PPP1R1BQ9UD71 204 aaPredicted RBP10.14□□□□□ -0.79
FAM49B-227ENST00000523514 PHF14O94880 888 aa10.13□□□□□ -0.79
FAM49B-227ENST00000523514 CYP19A1P11511 503 aaPredicted RBP10.13□□□□□ -0.79
FAM49B-227ENST00000523514 CALD1Q05682 793 aaKnown RBP10.13□□□□□ -0.79
FAM49B-227ENST00000523514 CCDC184Q52MB2 194 aa10.13□□□□□ -0.79
FAM49B-227ENST00000523514 TRAPPC3LQ5T215 181 aa10.13□□□□□ -0.79
FAM49B-227ENST00000523514 LHX8Q68G74 356 aa10.13□□□□□ -0.79
FAM49B-227ENST00000523514 ERICH6Q7L0X2 663 aa10.13□□□□□ -0.79
FAM49B-227ENST00000523514 POTEB2H3BUK9 544 aa10.12□□□□□ -0.79
FAM49B-227ENST00000523514 SNRPA1P09661 255 aaKnown RBP10.12□□□□□ -0.79
FAM49B-227ENST00000523514 PTGER2P43116 358 aa10.12□□□□□ -0.79
FAM49B-227ENST00000523514 NEUROD2Q15784 382 aa10.12□□□□□ -0.79
FAM49B-227ENST00000523514 SLC39A7Q92504 469 aa10.12□□□□□ -0.79
FAM49B-227ENST00000523514 RRP7AQ9Y3A4 280 aaKnown RBP10.12□□□□□ -0.79
FAM49B-227ENST00000523514 SOS1Q07889 1333 aaPredicted RBP10.11□□□□□ -0.79
FAM49B-227ENST00000523514 TULP1O00294 542 aaPredicted RBP10.11□□□□□ -0.79
FAM49B-227ENST00000523514 APAF1O14727 1248 aa10.11□□□□□ -0.79
FAM49B-227ENST00000523514 C7P10643 843 aa10.11□□□□□ -0.79
FAM49B-227ENST00000523514 RFC4P35249 363 aa10.11□□□□□ -0.79
FAM49B-227ENST00000523514 INTS5Q6P9B9 1019 aaKnown RBP10.11□□□□□ -0.79
FAM49B-227ENST00000523514 THUMPD2Q9BTF0 503 aaKnown RBP10.11□□□□□ -0.79
FAM49B-227ENST00000523514 TSPYL4Q9UJ04 414 aa10.11□□□□□ -0.79
FAM49B-227ENST00000523514 METRNQ9UJH8 293 aa10.11□□□□□ -0.79
FAM49B-227ENST00000523514 GTF3C3Q9Y5Q9 886 aa10.11□□□□□ -0.79
FAM49B-227ENST00000523514 COL15A1P39059 1388 aa10.11□□□□□ -0.79
FAM49B-227ENST00000523514 A0A087WZG4 1122 aa10.1□□□□□ -0.79
FAM49B-227ENST00000523514 POTEFA5A3E0 1075 aa10.1□□□□□ -0.79
FAM49B-227ENST00000523514 KCNQ3O43525 872 aa10.1□□□□□ -0.79
FAM49B-227ENST00000523514 IL6STP40189 918 aaPredicted RBP10.1□□□□□ -0.79
FAM49B-227ENST00000523514 NPM2Q86SE8 214 aaKnown RBP10.1□□□□□ -0.79
FAM49B-227ENST00000523514 AMIGO3Q86WK7 504 aa10.1□□□□□ -0.79
FAM49B-227ENST00000523514 ARHGEF1Q92888 912 aaKnown RBP10.1□□□□□ -0.79
FAM49B-227ENST00000523514 ARXQ96QS3 562 aa10.1□□□□□ -0.79
FAM49B-227ENST00000523514 ZBTB1Q9Y2K1 713 aa10.1□□□□□ -0.79
FAM49B-227ENST00000523514 CCER2I3L3R5 266 aa10.09□□□□□ -0.79
FAM49B-227ENST00000523514 EIF4A1P60842 406 aaKnown RBP10.09□□□□□ -0.79
FAM49B-227ENST00000523514 CCDC27Q2M243 656 aa10.09□□□□□ -0.79
FAM49B-227ENST00000523514 NLGN1Q8N2Q7 840 aa10.09□□□□□ -0.79
FAM49B-227ENST00000523514 NGEFQ8N5V2 710 aa10.09□□□□□ -0.79
FAM49B-227ENST00000523514 MIS18AQ9NYP9 233 aa10.09□□□□□ -0.79
FAM49B-227ENST00000523514 SCN7AQ01118 1682 aa10.09□□□□□ -0.79
FAM49B-227ENST00000523514 USP42Q9H9J4 1324 aaKnown RBP10.08□□□□□ -0.8
FAM49B-227ENST00000523514 ZPR1O75312 459 aa10.08□□□□□ -0.8
FAM49B-227ENST00000523514 CANXP27824 592 aaKnown RBP10.08□□□□□ -0.8
FAM49B-227ENST00000523514 EIF5P55010 431 aaKnown RBP10.08□□□□□ -0.8
FAM49B-227ENST00000523514 GNAI1P63096 354 aa10.08□□□□□ -0.8
FAM49B-227ENST00000523514 MSL1Q68DK7 614 aa10.08□□□□□ -0.8
FAM49B-227ENST00000523514 FAM9BQ8IZU0 186 aa10.08□□□□□ -0.8
FAM49B-227ENST00000523514 IFT57Q9NWB7 429 aa10.08□□□□□ -0.8
FAM49B-227ENST00000523514 NARFQ9UHQ1 456 aa10.08□□□□□ -0.8
FAM49B-227ENST00000523514 ERBB4Q15303 1308 aa10.07□□□□□ -0.8
FAM49B-227ENST00000523514 BCORQ6W2J9 1755 aa10.07□□□□□ -0.8
FAM49B-227ENST00000523514 CHL1O00533 1208 aa10.07□□□□□ -0.8
FAM49B-227ENST00000523514 GIGYF1O75420 1035 aaPredicted RBP10.07□□□□□ -0.8
FAM49B-227ENST00000523514 GYS1P13807 737 aa10.07□□□□□ -0.8
FAM49B-227ENST00000523514 DIEXFQ68CQ4 756 aaKnown RBP10.07□□□□□ -0.8
FAM49B-227ENST00000523514 HOXB7P09629 217 aa10.06□□□□□ -0.8
FAM49B-227ENST00000523514 SMIM5Q71RC9 77 aa10.06□□□□□ -0.8
FAM49B-227ENST00000523514 PDCD7Q8N8D1 485 aaKnown RBP10.06□□□□□ -0.8
FAM49B-227ENST00000523514 KCNV2Q8TDN2 545 aa10.06□□□□□ -0.8
FAM49B-227ENST00000523514 FHDC1Q9C0D6 1143 aaPredicted RBP10.06□□□□□ -0.8
FAM49B-227ENST00000523514 LAS1LQ9Y4W2 734 aaKnown RBP10.06□□□□□ -0.8
FAM49B-227ENST00000523514 USP16Q9Y5T5 823 aa10.06□□□□□ -0.8
FAM49B-227ENST00000523514 IL16Q14005 1332 aa10.06□□□□□ -0.8
FAM49B-227ENST00000523514 PRAMEF22A3QJZ6 481 aa10.05□□□□□ -0.8
FAM49B-227ENST00000523514 A1BGP04217 495 aa10.05□□□□□ -0.8
FAM49B-227ENST00000523514 MMP10P09238 476 aa10.05□□□□□ -0.8
FAM49B-227ENST00000523514 ZNF853P0CG23 659 aa10.05□□□□□ -0.8
FAM49B-227ENST00000523514 USPL1Q5W0Q7 1092 aa10.05□□□□□ -0.8
FAM49B-227ENST00000523514 DPY19L2Q6NUT2 758 aa10.05□□□□□ -0.8
FAM49B-227ENST00000523514 CHMP4AQ9BY43 222 aa10.05□□□□□ -0.8
FAM49B-227ENST00000523514 COLQQ9Y215 455 aaPredicted RBP10.05□□□□□ -0.8
FAM49B-227ENST00000523514 ZNF330Q9Y3S2 320 aaPredicted RBP10.05□□□□□ -0.8
FAM49B-227ENST00000523514 KIF13BQ9NQT8 1826 aa10.05□□□□□ -0.8
FAM49B-227ENST00000523514 POTEJP0CG39 1038 aa10.04□□□□□ -0.8
FAM49B-227ENST00000523514 IRX5P78411 483 aaPredicted RBP10.04□□□□□ -0.8
FAM49B-227ENST00000523514 WWC1Q8IX03 1113 aa10.04□□□□□ -0.8
FAM49B-227ENST00000523514 SYT17Q9BSW7 474 aa10.04□□□□□ -0.8
FAM49B-227ENST00000523514 CRISPLD2Q9H0B8 497 aa10.04□□□□□ -0.8
FAM49B-227ENST00000523514 MBIPQ9NS73 344 aa10.04□□□□□ -0.8
FAM49B-227ENST00000523514 WDR70Q9NW82 654 aa10.04□□□□□ -0.8
FAM49B-227ENST00000523514 SRP68Q9UHB9 627 aaKnown RBP10.04□□□□□ -0.8
FAM49B-227ENST00000523514 ZNF652Q9Y2D9 606 aa10.04□□□□□ -0.8
FAM49B-227ENST00000523514 CD2APQ9Y5K6 639 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms