RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 CNTNAP5Q8WYK1 1306 aa7.61□□□□□ -1.19
SKP1-210ENST00000522855 SHISA8B8ZZ34 492 aa7.61□□□□□ -1.19
SKP1-210ENST00000522855 BNIP3LO60238 219 aa7.61□□□□□ -1.19
SKP1-210ENST00000522855 HOXB4P17483 251 aaPredicted RBP7.61□□□□□ -1.19
SKP1-210ENST00000522855 EPHA4P54764 986 aa7.61□□□□□ -1.19
SKP1-210ENST00000522855 TMCO4Q5TGY1 634 aa7.61□□□□□ -1.19
SKP1-210ENST00000522855 KLRG1Q96E93 195 aa7.61□□□□□ -1.19
SKP1-210ENST00000522855 ABHD17AQ96GS6 310 aa7.61□□□□□ -1.19
SKP1-210ENST00000522855 GZF1Q9H116 711 aaPredicted RBP7.61□□□□□ -1.19
SKP1-210ENST00000522855 CXXC1Q9P0U4 656 aaPredicted RBP7.61□□□□□ -1.19
SKP1-210ENST00000522855 NSFL1CQ9UNZ2 370 aaKnown RBP7.61□□□□□ -1.19
SKP1-210ENST00000522855 PHF24Q9UPV7 400 aa7.61□□□□□ -1.19
SKP1-210ENST00000522855 NISCHQ9Y2I1 1504 aa7.61□□□□□ -1.19
SKP1-210ENST00000522855 A6NJY4 79 aa7.6□□□□□ -1.19
SKP1-210ENST00000522855 CDK2AP1O14519 115 aa7.6□□□□□ -1.19
SKP1-210ENST00000522855 ITGB2P05107 769 aa7.6□□□□□ -1.19
SKP1-210ENST00000522855 OCLNQ16625 522 aa7.6□□□□□ -1.19
SKP1-210ENST00000522855 EFHC2Q5JST6 749 aa7.6□□□□□ -1.19
SKP1-210ENST00000522855 PGBD3Q8N328 593 aa7.6□□□□□ -1.19
SKP1-210ENST00000522855 NIFKQ9BYG3 293 aaKnown RBP7.6□□□□□ -1.19
SKP1-210ENST00000522855 LOC100996750A0A140TA64 210 aa7.59□□□□□ -1.19
SKP1-210ENST00000522855 FGFR3P22607 806 aa7.59□□□□□ -1.19
SKP1-210ENST00000522855 IGFBP4P22692 258 aa7.59□□□□□ -1.19
SKP1-210ENST00000522855 FOXK2Q01167 660 aa7.59□□□□□ -1.19
SKP1-210ENST00000522855 PHLDB3Q6NSJ2 640 aa7.59□□□□□ -1.19
SKP1-210ENST00000522855 SLCO4C1Q6ZQN7 724 aa7.59□□□□□ -1.19
SKP1-210ENST00000522855 NLRP8Q86W28 1048 aa7.59□□□□□ -1.19
SKP1-210ENST00000522855 KRTAP4-6Q9BYQ5 205 aa7.59□□□□□ -1.19
SKP1-210ENST00000522855 ZDHHC3Q9NYG2 299 aa7.59□□□□□ -1.19
SKP1-210ENST00000522855 SLAIN2Q9P270 581 aa7.59□□□□□ -1.19
SKP1-210ENST00000522855 SERTAD1Q9UHV2 236 aa7.59□□□□□ -1.19
SKP1-210ENST00000522855 FOXO3O43524 673 aa7.58□□□□□ -1.2
SKP1-210ENST00000522855 WEE1P30291 646 aa7.58□□□□□ -1.2
SKP1-210ENST00000522855 TXNDC2Q86VQ3 553 aa7.58□□□□□ -1.2
SKP1-210ENST00000522855 GAS2L2Q8NHY3 880 aa7.58□□□□□ -1.2
SKP1-210ENST00000522855 ZDHHC1Q8WTX9 485 aa7.58□□□□□ -1.2
SKP1-210ENST00000522855 PRIMPOLQ96LW4 560 aa7.58□□□□□ -1.2
SKP1-210ENST00000522855 SCHIP1Q9P0W5 487 aaPredicted RBP7.58□□□□□ -1.2
SKP1-210ENST00000522855 GDF2Q9UK05 429 aaPredicted RBP7.58□□□□□ -1.2
SKP1-210ENST00000522855 PTCD1O75127 700 aaKnown RBP7.57□□□□□ -1.2
SKP1-210ENST00000522855 SNRPNP63162 240 aaKnown RBP7.57□□□□□ -1.2
SKP1-210ENST00000522855 CTBSQ01459 385 aa7.57□□□□□ -1.2
SKP1-210ENST00000522855 SND1Q7KZF4 910 aaKnown RBP eCLIP7.57□□□□□ -1.22e-12■■□□□ 11.8
SKP1-210ENST00000522855 NEDD1Q8NHV4 660 aa7.57□□□□□ -1.2
SKP1-210ENST00000522855 VTI1AQ96AJ9 217 aa7.57□□□□□ -1.2
SKP1-210ENST00000522855 ZCCHC2Q9C0B9 1178 aaKnown RBP7.57□□□□□ -1.2
SKP1-210ENST00000522855 CHMP3Q9Y3E7 222 aa7.57□□□□□ -1.2
SKP1-210ENST00000522855 PCDHGC4Q9Y5F7 938 aa7.57□□□□□ -1.2
SKP1-210ENST00000522855 PHF20L1A8MW92 1017 aa7.56□□□□□ -1.2
SKP1-210ENST00000522855 FIGNL1Q6PIW4 674 aa7.56□□□□□ -1.2
SKP1-210ENST00000522855 TNS4Q8IZW8 715 aa7.56□□□□□ -1.2
SKP1-210ENST00000522855 GOLGA6L1Q8N7Z2 621 aa7.56□□□□□ -1.2
SKP1-210ENST00000522855 COL26A1Q96A83 441 aa7.56□□□□□ -1.2
SKP1-210ENST00000522855 DCAF5Q96JK2 942 aa7.56□□□□□ -1.2
SKP1-210ENST00000522855 A0A1W2PNR3 127 aa7.55□□□□□ -1.2
SKP1-210ENST00000522855 IGHA1P01876 353 aa7.55□□□□□ -1.2
SKP1-210ENST00000522855 FAM157BP0CG42 384 aa7.55□□□□□ -1.2
SKP1-210ENST00000522855 TNP2Q05952 138 aa7.55□□□□□ -1.2
SKP1-210ENST00000522855 SUZ12Q15022 739 aaKnown RBP7.55□□□□□ -1.2
SKP1-210ENST00000522855 FAM182BQ5T319 152 aa7.55□□□□□ -1.2
SKP1-210ENST00000522855 BEND7Q8N7W2 519 aaPredicted RBP7.55□□□□□ -1.2
SKP1-210ENST00000522855 SCG3Q8WXD2 468 aaKnown RBP7.55□□□□□ -1.2
SKP1-210ENST00000522855 ZIC5Q96T25 663 aa7.55□□□□□ -1.2
SKP1-210ENST00000522855 TSPAN10Q9H1Z9 355 aaPredicted RBP7.55□□□□□ -1.2
SKP1-210ENST00000522855 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.55□□□□□ -1.24e-6■■■■■ 33.3
SKP1-210ENST00000522855 PPP1R12BO60237 982 aaPredicted RBP7.54□□□□□ -1.2
SKP1-210ENST00000522855 ARAFP10398 606 aa7.54□□□□□ -1.2
SKP1-210ENST00000522855 BMP4P12644 408 aa7.54□□□□□ -1.2
SKP1-210ENST00000522855 PSMA6P60900 246 aaKnown RBP7.54□□□□□ -1.2
SKP1-210ENST00000522855 FKBP5Q13451 457 aaPredicted RBP7.54□□□□□ -1.2
SKP1-210ENST00000522855 NBPF1Q3BBV0 1214 aa7.54□□□□□ -1.2
SKP1-210ENST00000522855 PLA2G4EQ3MJ16 856 aa7.54□□□□□ -1.2
SKP1-210ENST00000522855 SAMD5Q5TGI4 173 aa7.54□□□□□ -1.2
SKP1-210ENST00000522855 POTEAQ6S8J7 498 aa7.54□□□□□ -1.2
SKP1-210ENST00000522855 SLC9A9Q8IVB4 645 aa7.54□□□□□ -1.2
SKP1-210ENST00000522855 GALNT6Q8NCL4 622 aa7.54□□□□□ -1.2
SKP1-210ENST00000522855 C7orf43Q8WVR3 580 aa7.54□□□□□ -1.2
SKP1-210ENST00000522855 EDARADDQ8WWZ3 215 aa7.54□□□□□ -1.2
SKP1-210ENST00000522855 EGFL7Q9UHF1 273 aa7.54□□□□□ -1.2
SKP1-210ENST00000522855 GGA1Q9UJY5 639 aa7.54□□□□□ -1.2
SKP1-210ENST00000522855 ATXN7O15265 892 aaPredicted RBP7.53□□□□□ -1.2
SKP1-210ENST00000522855 EFSO43281 561 aa7.53□□□□□ -1.2
SKP1-210ENST00000522855 LGR5O75473 907 aa7.53□□□□□ -1.2
SKP1-210ENST00000522855 MAPTP10636 758 aaKnown RBP7.53□□□□□ -1.2
SKP1-210ENST00000522855 EPXP11678 715 aa7.53□□□□□ -1.2
SKP1-210ENST00000522855 TXLNAP40222 546 aa7.53□□□□□ -1.2
SKP1-210ENST00000522855 TEAD4Q15561 434 aa7.53□□□□□ -1.2
SKP1-210ENST00000522855 CCDC27Q2M243 656 aa7.53□□□□□ -1.2
SKP1-210ENST00000522855 GPAT2Q6NUI2 795 aa7.53□□□□□ -1.2
SKP1-210ENST00000522855 PODNQ7Z5L7 613 aa7.53□□□□□ -1.2
SKP1-210ENST00000522855 STAG2Q8N3U4 1231 aa7.53□□□□□ -1.2
SKP1-210ENST00000522855 MKNK1Q9BUB5 465 aa7.53□□□□□ -1.2
SKP1-210ENST00000522855 KLF15Q9UIH9 416 aa7.53□□□□□ -1.2
SKP1-210ENST00000522855 ATAD2Q6PL18 1390 aa7.53□□□□□ -1.2
SKP1-210ENST00000522855 DCDC2BA2VCK2 349 aa7.52□□□□□ -1.21
SKP1-210ENST00000522855 EML1O00423 815 aa7.52□□□□□ -1.21
SKP1-210ENST00000522855 PROCP04070 461 aa7.52□□□□□ -1.21
SKP1-210ENST00000522855 SERPINB4P48594 390 aa7.52□□□□□ -1.21
SKP1-210ENST00000522855 MFAP1P55081 439 aaKnown RBP7.52□□□□□ -1.21
SKP1-210ENST00000522855 LINC00114Q6XXX2 140 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms