RNA–Protein interactions for RNA: ENST00000522502.1

CLU-213, Transcript of clusterin, human

TSL 2

Gene CLU, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLU-213	ENST00000522502	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.51	□□□□□ -0.25
CLU-213	ENST00000522502	CFAP53	Q96M91	514 aa		13.51	□□□□□ -0.25
CLU-213	ENST00000522502	SETDB2	Q96T68	719 aa		13.51	□□□□□ -0.25
CLU-213	ENST00000522502	BRIP1	Q9BX63	1249 aa		13.51	□□□□□ -0.25
CLU-213	ENST00000522502	KDM2B	Q8NHM5	1336 aa		13.5	□□□□□ -0.25
CLU-213	ENST00000522502	GLTPD2	A6NH11	291 aa		13.5	□□□□□ -0.25
CLU-213	ENST00000522502	CNBD1	Q8NA66	436 aa		13.5	□□□□□ -0.25
CLU-213	ENST00000522502	SRGN	P10124	158 aa		13.49	□□□□□ -0.25
CLU-213	ENST00000522502	PRPF40B	Q6NWY9	871 aa	Known RBP	13.49	□□□□□ -0.25
CLU-213	ENST00000522502	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.49	□□□□□ -0.25
CLU-213	ENST00000522502	DDN	O94850	711 aa	Predicted RBP	13.48	□□□□□ -0.25
CLU-213	ENST00000522502	SNRPA1	P09661	255 aa	Known RBP	13.48	□□□□□ -0.25
CLU-213	ENST00000522502	TTLL7	Q6ZT98	887 aa		13.48	□□□□□ -0.25
CLU-213	ENST00000522502	RTF1	Q92541	710 aa	Known RBP	13.48	□□□□□ -0.25
CLU-213	ENST00000522502	ZNF428	Q96B54	188 aa		13.48	□□□□□ -0.25
CLU-213	ENST00000522502	PLEKHF1	Q96S99	279 aa		13.48	□□□□□ -0.25
CLU-213	ENST00000522502	NUDC	Q9Y266	331 aa		13.48	□□□□□ -0.25
CLU-213	ENST00000522502	KDM3B	Q7LBC6	1761 aa		13.48	□□□□□ -0.25
CLU-213	ENST00000522502	NPHP1	O15259	732 aa		13.47	□□□□□ -0.25
CLU-213	ENST00000522502	PDE6B	P35913	854 aa		13.47	□□□□□ -0.25
CLU-213	ENST00000522502	ERFE	Q4G0M1	354 aa		13.47	□□□□□ -0.25
CLU-213	ENST00000522502	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.47	□□□□□ -0.25
CLU-213	ENST00000522502	NUTM1	Q86Y26	1132 aa		13.47	□□□□□ -0.25
CLU-213	ENST00000522502	KLRG1	Q96E93	195 aa		13.47	□□□□□ -0.25
CLU-213	ENST00000522502	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
CLU-213	ENST00000522502	NUP98	P52948	1817 aa		13.47	□□□□□ -0.25
CLU-213	ENST00000522502	ARFGEF2	Q9Y6D5	1785 aa		13.47	□□□□□ -0.25
CLU-213	ENST00000522502	TAF7	Q15545	349 aa	Predicted RBP	13.46	□□□□□ -0.25
CLU-213	ENST00000522502	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.46	□□□□□ -0.25
CLU-213	ENST00000522502	C7orf43	Q8WVR3	580 aa		13.46	□□□□□ -0.25
CLU-213	ENST00000522502	RRP7A	Q9Y3A4	280 aa	Known RBP	13.46	□□□□□ -0.25
CLU-213	ENST00000522502	ABCC12	Q96J65	1359 aa		13.45	□□□□□ -0.26
CLU-213	ENST00000522502	ANXA1	P04083	346 aa		13.45	□□□□□ -0.26
CLU-213	ENST00000522502	MYL6B	P14649	208 aa		13.45	□□□□□ -0.26
CLU-213	ENST00000522502	VEGFA	P15692	232 aa	Predicted RBP	13.45	□□□□□ -0.26
CLU-213	ENST00000522502	ST5	P78524	1137 aa		13.45	□□□□□ -0.26
CLU-213	ENST00000522502	FSTL1	Q12841	308 aa		13.45	□□□□□ -0.26
CLU-213	ENST00000522502	C3orf67	Q6ZVT6	689 aa		13.45	□□□□□ -0.26
CLU-213	ENST00000522502	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.45	□□□□□ -0.26
CLU-213	ENST00000522502	LAMB4	A4D0S4	1761 aa		13.45	□□□□□ -0.26
CLU-213	ENST00000522502	ZNF541	Q9H0D2	1346 aa		13.44	□□□□□ -0.26
CLU-213	ENST00000522502	COL4A5	P29400	1685 aa		13.44	□□□□□ -0.26
CLU-213	ENST00000522502	GPT	P24298	496 aa		13.44	□□□□□ -0.26
CLU-213	ENST00000522502	EIF4A1	P60842	406 aa	Known RBP	13.44	□□□□□ -0.26
CLU-213	ENST00000522502	STYK1	Q6J9G0	422 aa		13.44	□□□□□ -0.26
CLU-213	ENST00000522502	SMC1B	Q8NDV3	1235 aa		13.44	□□□□□ -0.26
CLU-213	ENST00000522502	MASTL	Q96GX5	879 aa		13.44	□□□□□ -0.26
CLU-213	ENST00000522502	TAOK3	Q9H2K8	898 aa		13.44	□□□□□ -0.26
CLU-213	ENST00000522502	PROSER3	Q2NL68	480 aa		13.43	□□□□□ -0.26
CLU-213	ENST00000522502	NPM2	Q86SE8	214 aa	Known RBP	13.43	□□□□□ -0.26
CLU-213	ENST00000522502	ZBTB3	Q9H5J0	574 aa		13.43	□□□□□ -0.26
CLU-213	ENST00000522502	UBN2	Q6ZU65	1347 aa		13.42	□□□□□ -0.26
CLU-213	ENST00000522502	TCERG1	O14776	1098 aa	Known RBP	13.42	□□□□□ -0.26
CLU-213	ENST00000522502	NECTIN2	Q92692	538 aa		13.42	□□□□□ -0.26
CLU-213	ENST00000522502	CNKSR1	Q969H4	720 aa		13.42	□□□□□ -0.26
CLU-213	ENST00000522502	KLRG2	A4D1S0	409 aa	Predicted RBP	13.41	□□□□□ -0.26
CLU-213	ENST00000522502	NFE2L2	Q16236	605 aa		13.41	□□□□□ -0.26
CLU-213	ENST00000522502	KRT24	Q2M2I5	525 aa		13.41	□□□□□ -0.26
CLU-213	ENST00000522502	CLEC4G	Q6UXB4	293 aa		13.41	□□□□□ -0.26
CLU-213	ENST00000522502	CCDC146	Q8IYE0	955 aa		13.41	□□□□□ -0.26
CLU-213	ENST00000522502	JMY	Q8N9B5	988 aa		13.41	□□□□□ -0.26
CLU-213	ENST00000522502	TAF1	P21675	1872 aa		13.41	□□□□□ -0.26
CLU-213	ENST00000522502	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.4	□□□□□ -0.26
CLU-213	ENST00000522502	HTATSF1	O43719	755 aa	Known RBP	13.4	□□□□□ -0.26
CLU-213	ENST00000522502	NPR1	P16066	1061 aa		13.4	□□□□□ -0.26
CLU-213	ENST00000522502	SUSD4	Q5VX71	490 aa		13.4	□□□□□ -0.26
CLU-213	ENST00000522502	SYNE4	Q8N205	404 aa		13.4	□□□□□ -0.26
CLU-213	ENST00000522502	CAPN15	O75808	1086 aa		13.39	□□□□□ -0.27
CLU-213	ENST00000522502	EIF2S2	P20042	333 aa	Known RBP	13.39	□□□□□ -0.27
CLU-213	ENST00000522502	FMR1	Q06787	632 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
CLU-213	ENST00000522502	PDIA6	Q15084	440 aa		13.39	□□□□□ -0.27
CLU-213	ENST00000522502	TPTE2	Q6XPS3	522 aa		13.39	□□□□□ -0.27
CLU-213	ENST00000522502	LRP10	Q7Z4F1	713 aa		13.39	□□□□□ -0.27
CLU-213	ENST00000522502	MKRN1	Q9UHC7	482 aa	Known RBP	13.39	□□□□□ -0.27
CLU-213	ENST00000522502	SNED1	Q8TER0	1413 aa		13.39	□□□□□ -0.27
CLU-213	ENST00000522502	LTBP3	Q9NS15	1303 aa		13.39	□□□□□ -0.27
CLU-213	ENST00000522502	NEUROD2	Q15784	382 aa		13.38	□□□□□ -0.27
CLU-213	ENST00000522502	DPY19L2	Q6NUT2	758 aa		13.38	□□□□□ -0.27
CLU-213	ENST00000522502	ZNF652	Q9Y2D9	606 aa		13.38	□□□□□ -0.27
CLU-213	ENST00000522502	LTBP1	Q14766	1721 aa		13.38	□□□□□ -0.27
CLU-213	ENST00000522502	MAP3K15	Q6ZN16	1313 aa		13.38	□□□□□ -0.27
CLU-213	ENST00000522502	RIPK4	P57078	832 aa		13.37	□□□□□ -0.27
CLU-213	ENST00000522502	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
CLU-213	ENST00000522502	CCDC93	Q567U6	631 aa		13.37	□□□□□ -0.27
CLU-213	ENST00000522502	PDZRN3	Q9UPQ7	1066 aa		13.37	□□□□□ -0.27
CLU-213	ENST00000522502	RNF123	Q5XPI4	1314 aa		13.37	□□□□□ -0.27
CLU-213	ENST00000522502	HSPA1A	P0DMV8	641 aa	Known RBP	13.36	□□□□□ -0.27
CLU-213	ENST00000522502	HSPA1B	P0DMV9	641 aa	Known RBP	13.36	□□□□□ -0.27
CLU-213	ENST00000522502	GTF2E1	P29083	439 aa	Predicted RBP	13.36	□□□□□ -0.27
CLU-213	ENST00000522502	DDX10	Q13206	875 aa	Known RBP	13.36	□□□□□ -0.27
CLU-213	ENST00000522502	EAPP	Q56P03	285 aa	Predicted RBP	13.36	□□□□□ -0.27
CLU-213	ENST00000522502	CHADL	Q6NUI6	762 aa		13.36	□□□□□ -0.27
CLU-213	ENST00000522502	ZNF34	Q8IZ26	560 aa		13.36	□□□□□ -0.27
CLU-213	ENST00000522502	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.36	□□□□□ -0.27
CLU-213	ENST00000522502	TSPYL4	Q9UJ04	414 aa		13.36	□□□□□ -0.27
CLU-213	ENST00000522502	LAMB2	P55268	1798 aa		13.35	□□□□□ -0.27
CLU-213	ENST00000522502	COL4A1	P02462	1669 aa		13.35	□□□□□ -0.27
CLU-213	ENST00000522502	NTSR2	O95665	410 aa		13.35	□□□□□ -0.27
CLU-213	ENST00000522502	IARS	P41252	1262 aa	Known RBP	13.35	□□□□□ -0.27
CLU-213	ENST00000522502	TMPO	P42166	694 aa	Known RBP	13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms