RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 C11orf91Q3C1V1 193 aa8.65□□□□□ -1.02
CNOT8-220ENST00000522139 C1orf53Q5VUE5 145 aa8.65□□□□□ -1.02
CNOT8-220ENST00000522139 RNF217Q8TC41 542 aa8.65□□□□□ -1.02
CNOT8-220ENST00000522139 ZFP42Q96MM3 310 aa8.65□□□□□ -1.02
CNOT8-220ENST00000522139 SPATA31C2B4DYI2 1134 aa8.64□□□□□ -1.03
CNOT8-220ENST00000522139 NBPF10Q6P3W6 841 aaKnown RBP8.64□□□□□ -1.03
CNOT8-220ENST00000522139 C7orf43Q8WVR3 580 aa8.64□□□□□ -1.03
CNOT8-220ENST00000522139 RBM47A0AV96 593 aaKnown RBP8.63□□□□□ -1.03
CNOT8-220ENST00000522139 SNRPBP14678 240 aaKnown RBP8.63□□□□□ -1.03
CNOT8-220ENST00000522139 RHOQP17081 205 aa8.63□□□□□ -1.03
CNOT8-220ENST00000522139 LYSMD3Q7Z3D4 306 aa8.63□□□□□ -1.03
CNOT8-220ENST00000522139 NPAS4Q8IUM7 802 aa8.63□□□□□ -1.03
CNOT8-220ENST00000522139 ETFBKMTQ8IXQ9 262 aa8.63□□□□□ -1.03
CNOT8-220ENST00000522139 ABTB2Q8N961 1025 aa8.63□□□□□ -1.03
CNOT8-220ENST00000522139 IFT43Q96FT9 208 aa8.63□□□□□ -1.03
CNOT8-220ENST00000522139 ASB16Q96NS5 453 aa8.63□□□□□ -1.03
CNOT8-220ENST00000522139 CCDC87Q9NVE4 849 aa8.63□□□□□ -1.03
CNOT8-220ENST00000522139 BRPF3Q9ULD4 1205 aa8.63□□□□□ -1.03
CNOT8-220ENST00000522139 FIGNL2A6NMB9 653 aa8.62□□□□□ -1.03
CNOT8-220ENST00000522139 TTLL8A6PVC2 850 aa8.62□□□□□ -1.03
CNOT8-220ENST00000522139 FZD6O60353 706 aa8.62□□□□□ -1.03
CNOT8-220ENST00000522139 NBPF1Q3BBV0 1214 aa8.62□□□□□ -1.03
CNOT8-220ENST00000522139 ALKBH2Q6NS38 261 aa8.62□□□□□ -1.03
CNOT8-220ENST00000522139 ATCAYQ86WG3 371 aa8.62□□□□□ -1.03
CNOT8-220ENST00000522139 ZSCAN29Q8IWY8 852 aaPredicted RBP8.62□□□□□ -1.03
CNOT8-220ENST00000522139 RHPN1Q8TCX5 695 aa8.62□□□□□ -1.03
CNOT8-220ENST00000522139 NDUFB5O43674 189 aa8.61□□□□□ -1.03
CNOT8-220ENST00000522139 WDR44Q5JSH3 913 aa8.61□□□□□ -1.03
CNOT8-220ENST00000522139 KLRG1Q96E93 195 aa8.61□□□□□ -1.03
CNOT8-220ENST00000522139 RBCK1Q9BYM8 510 aa8.61□□□□□ -1.03
CNOT8-220ENST00000522139 ZDHHC3Q9NYG2 299 aa8.61□□□□□ -1.03
CNOT8-220ENST00000522139 BCS1LQ9Y276 419 aa8.61□□□□□ -1.03
CNOT8-220ENST00000522139 SOS2Q07890 1332 aaPredicted RBP8.6□□□□□ -1.03
CNOT8-220ENST00000522139 TATP17735 454 aaPredicted RBP8.59□□□□□ -1.03
CNOT8-220ENST00000522139 COL19A1Q14993 1142 aa8.59□□□□□ -1.03
CNOT8-220ENST00000522139 TMC7Q7Z402 723 aa8.59□□□□□ -1.03
CNOT8-220ENST00000522139 TREML1Q86YW5 311 aa8.59□□□□□ -1.03
CNOT8-220ENST00000522139 RGL4Q8IZJ4 473 aa8.59□□□□□ -1.03
CNOT8-220ENST00000522139 TMC1Q8TDI8 760 aa8.59□□□□□ -1.03
CNOT8-220ENST00000522139 ZNF775Q96BV0 537 aaPredicted RBP8.59□□□□□ -1.03
CNOT8-220ENST00000522139 CITED4Q96RK1 184 aa8.59□□□□□ -1.03
CNOT8-220ENST00000522139 BCL2L13Q9BXK5 485 aa8.59□□□□□ -1.03
CNOT8-220ENST00000522139 TIMMDC1Q9NPL8 285 aa8.59□□□□□ -1.03
CNOT8-220ENST00000522139 ATP4AP20648 1035 aa8.58□□□□□ -1.04
CNOT8-220ENST00000522139 ZAP70P43403 619 aa8.58□□□□□ -1.04
CNOT8-220ENST00000522139 BICDL1Q6ZP65 573 aa8.58□□□□□ -1.04
CNOT8-220ENST00000522139 ZNF280CQ8ND82 737 aa8.58□□□□□ -1.04
CNOT8-220ENST00000522139 EDEM1Q92611 657 aa8.58□□□□□ -1.04
CNOT8-220ENST00000522139 HSH2DQ96JZ2 352 aa8.58□□□□□ -1.04
CNOT8-220ENST00000522139 SUSD3Q96L08 255 aa8.58□□□□□ -1.04
CNOT8-220ENST00000522139 POLIQ9UNA4 740 aa8.58□□□□□ -1.04
CNOT8-220ENST00000522139 IGHA2P01877 340 aa8.57□□□□□ -1.04
CNOT8-220ENST00000522139 MSX1P28360 303 aa8.57□□□□□ -1.04
CNOT8-220ENST00000522139 DNM1Q05193 864 aaKnown RBP8.57□□□□□ -1.04
CNOT8-220ENST00000522139 GPC6Q9Y625 555 aaPredicted RBP8.57□□□□□ -1.04
CNOT8-220ENST00000522139 UNCXA6NJT0 531 aa8.56□□□□□ -1.04
CNOT8-220ENST00000522139 MAN1A2O60476 641 aa8.56□□□□□ -1.04
CNOT8-220ENST00000522139 MICAL2O94851 1124 aa8.56□□□□□ -1.04
CNOT8-220ENST00000522139 ARSJQ5FYB0 599 aaPredicted RBP8.56□□□□□ -1.04
CNOT8-220ENST00000522139 FBXO33Q7Z6M2 555 aa8.56□□□□□ -1.04
CNOT8-220ENST00000522139 DNMT3LQ9UJW3 386 aa8.56□□□□□ -1.04
CNOT8-220ENST00000522139 A0A1B0GTH6 734 aa8.55□□□□□ -1.04
CNOT8-220ENST00000522139 TGFBR3LH3BV60 316 aa8.55□□□□□ -1.04
CNOT8-220ENST00000522139 MZF1P28698 734 aaPredicted RBP8.55□□□□□ -1.04
CNOT8-220ENST00000522139 TAGLNQ01995 201 aaKnown RBP8.55□□□□□ -1.04
CNOT8-220ENST00000522139 LRRC69Q6ZNQ3 347 aa8.55□□□□□ -1.04
CNOT8-220ENST00000522139 GPR152Q8TDT2 470 aa8.55□□□□□ -1.04
CNOT8-220ENST00000522139 GIPC2Q8TF65 315 aa8.55□□□□□ -1.04
CNOT8-220ENST00000522139 ZIC5Q96T25 663 aa8.55□□□□□ -1.04
CNOT8-220ENST00000522139 FAM129BQ96TA1 746 aa8.55□□□□□ -1.04
CNOT8-220ENST00000522139 NEUROD4Q9HD90 331 aa8.55□□□□□ -1.04
CNOT8-220ENST00000522139 PDGFAP04085 211 aa8.54□□□□□ -1.04
CNOT8-220ENST00000522139 ZNF16P17020 682 aaPredicted RBP8.54□□□□□ -1.04
CNOT8-220ENST00000522139 DSC3Q14574 896 aa8.54□□□□□ -1.04
CNOT8-220ENST00000522139 HIF1AQ16665 826 aa8.54□□□□□ -1.04
CNOT8-220ENST00000522139 GPAMQ9HCL2 828 aa8.54□□□□□ -1.04
CNOT8-220ENST00000522139 ANKIB1Q9P2G1 1089 aa8.54□□□□□ -1.04
CNOT8-220ENST00000522139 DMGDHQ9UI17 866 aaKnown RBP8.54□□□□□ -1.04
CNOT8-220ENST00000522139 A0A1W2PNR3 127 aa8.53□□□□□ -1.04
CNOT8-220ENST00000522139 E9PSI1 815 aa8.53□□□□□ -1.04
CNOT8-220ENST00000522139 OPLAHO14841 1288 aa8.53□□□□□ -1.04
CNOT8-220ENST00000522139 TREHO43280 583 aa8.53□□□□□ -1.04
CNOT8-220ENST00000522139 IER5Q5VY09 327 aa8.53□□□□□ -1.04
CNOT8-220ENST00000522139 SOBPA7XYQ1 873 aa8.52□□□□□ -1.05
CNOT8-220ENST00000522139 GPR182O15218 404 aa8.52□□□□□ -1.05
CNOT8-220ENST00000522139 P4HBP07237 508 aaKnown RBP8.52□□□□□ -1.05
CNOT8-220ENST00000522139 IDH3AP50213 366 aa8.52□□□□□ -1.05
CNOT8-220ENST00000522139 PDE3BQ13370 1112 aa8.52□□□□□ -1.05
CNOT8-220ENST00000522139 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.52□□□□□ -1.05
CNOT8-220ENST00000522139 GJD3Q8N144 294 aa8.52□□□□□ -1.05
CNOT8-220ENST00000522139 ALKBH8Q96BT7 664 aaKnown RBP8.52□□□□□ -1.05
CNOT8-220ENST00000522139 NUDT16Q96DE0 195 aaKnown RBP8.52□□□□□ -1.05
CNOT8-220ENST00000522139 DMRTB1Q96MA1 342 aa8.52□□□□□ -1.05
CNOT8-220ENST00000522139 RUBCNLQ9H714 662 aa8.52□□□□□ -1.05
CNOT8-220ENST00000522139 USP20Q9Y2K6 914 aa8.52□□□□□ -1.05
CNOT8-220ENST00000522139 TERTO14746 1132 aaKnown RBP8.51□□□□□ -1.05
CNOT8-220ENST00000522139 USP5P45974 858 aa8.51□□□□□ -1.05
CNOT8-220ENST00000522139 PLCB3Q01970 1234 aa8.51□□□□□ -1.05
CNOT8-220ENST00000522139 FMR1Q06787 632 aaKnown RBP eCLIP8.51□□□□□ -1.05
CNOT8-220ENST00000522139 EAPPQ56P03 285 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms