RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 PARP3Q9Y6F1 533 aa11.57□□□□□ -0.56
NUDCD1-204ENST00000521439 INSM1Q01101 510 aaPredicted RBP11.56□□□□□ -0.56
NUDCD1-204ENST00000521439 FKBP4Q02790 459 aaKnown RBP eCLIP11.56□□□□□ -0.56
NUDCD1-204ENST00000521439 SH3PXD2AQ5TCZ1 1133 aa11.56□□□□□ -0.56
NUDCD1-204ENST00000521439 C16orf46Q6P387 395 aa11.56□□□□□ -0.56
NUDCD1-204ENST00000521439 HELQQ8TDG4 1101 aa11.56□□□□□ -0.56
NUDCD1-204ENST00000521439 H3BRB1 525 aa11.55□□□□□ -0.56
NUDCD1-204ENST00000521439 PLA2G4AP47712 749 aa11.55□□□□□ -0.56
NUDCD1-204ENST00000521439 GPR161Q8N6U8 529 aaKnown RBP11.55□□□□□ -0.56
NUDCD1-204ENST00000521439 ZNF837Q96EG3 531 aaPredicted RBP11.55□□□□□ -0.56
NUDCD1-204ENST00000521439 TUT1Q9H6E5 874 aaKnown RBP11.55□□□□□ -0.56
NUDCD1-204ENST00000521439 HCN4Q9Y3Q4 1203 aa11.55□□□□□ -0.56
NUDCD1-204ENST00000521439 COX20Q5RI15 118 aa11.54□□□□□ -0.56
NUDCD1-204ENST00000521439 GLYCTKQ8IVS8 523 aa11.54□□□□□ -0.56
NUDCD1-204ENST00000521439 ALDH16A1Q8IZ83 802 aa11.54□□□□□ -0.56
NUDCD1-204ENST00000521439 MYO19Q96H55 970 aa11.54□□□□□ -0.56
NUDCD1-204ENST00000521439 SAP130Q9H0E3 1048 aa11.54□□□□□ -0.56
NUDCD1-204ENST00000521439 QTRT2Q9H974 415 aaKnown RBP11.54□□□□□ -0.56
NUDCD1-204ENST00000521439 MTMR3Q13615 1198 aa11.53□□□□□ -0.56
NUDCD1-204ENST00000521439 DBN1Q16643 649 aa11.53□□□□□ -0.56
NUDCD1-204ENST00000521439 NGLY1Q96IV0 654 aa11.53□□□□□ -0.56
NUDCD1-204ENST00000521439 BIN2Q9UBW5 565 aaPredicted RBP11.53□□□□□ -0.56
NUDCD1-204ENST00000521439 FOXR1Q6PIV2 292 aa11.52□□□□□ -0.57
NUDCD1-204ENST00000521439 GPAMQ9HCL2 828 aa11.52□□□□□ -0.57
NUDCD1-204ENST00000521439 MSX1P28360 303 aa11.51□□□□□ -0.57
NUDCD1-204ENST00000521439 LBRQ14739 615 aaKnown RBP11.51□□□□□ -0.57
NUDCD1-204ENST00000521439 C1orf53Q5VUE5 145 aa11.51□□□□□ -0.57
NUDCD1-204ENST00000521439 PGBD3Q8N328 593 aa11.51□□□□□ -0.57
NUDCD1-204ENST00000521439 COL25A1Q9BXS0 654 aaPredicted RBP11.51□□□□□ -0.57
NUDCD1-204ENST00000521439 PHACTR1Q9C0D0 580 aa11.51□□□□□ -0.57
NUDCD1-204ENST00000521439 NUCKS1Q9H1E3 243 aaKnown RBP11.51□□□□□ -0.57
NUDCD1-204ENST00000521439 LRFN2Q9ULH4 789 aa11.51□□□□□ -0.57
NUDCD1-204ENST00000521439 NPR3P17342 541 aa11.5□□□□□ -0.57
NUDCD1-204ENST00000521439 ECM1Q16610 540 aa11.5□□□□□ -0.57
NUDCD1-204ENST00000521439 RTN1Q16799 776 aa11.5□□□□□ -0.57
NUDCD1-204ENST00000521439 NBPF1Q3BBV0 1214 aa11.5□□□□□ -0.57
NUDCD1-204ENST00000521439 FAM13AO94988 1023 aa11.49□□□□□ -0.57
NUDCD1-204ENST00000521439 TXLNAP40222 546 aa11.49□□□□□ -0.57
NUDCD1-204ENST00000521439 AIDAQ96BJ3 306 aa11.49□□□□□ -0.57
NUDCD1-204ENST00000521439 STIM2Q9P246 746 aa11.49□□□□□ -0.57
NUDCD1-204ENST00000521439 TNFRSF10BO14763 440 aa11.48□□□□□ -0.57
NUDCD1-204ENST00000521439 KRT76Q01546 638 aa11.48□□□□□ -0.57
NUDCD1-204ENST00000521439 GTPBP3Q969Y2 492 aaKnown RBP11.48□□□□□ -0.57
NUDCD1-204ENST00000521439 TRERF1Q96PN7 1200 aa11.48□□□□□ -0.57
NUDCD1-204ENST00000521439 ZDHHC3Q9NYG2 299 aa11.48□□□□□ -0.57
NUDCD1-204ENST00000521439 C11orf91Q3C1V1 193 aa11.47□□□□□ -0.57
NUDCD1-204ENST00000521439 EFHC2Q5JST6 749 aa11.47□□□□□ -0.57
NUDCD1-204ENST00000521439 RGS22Q8NE09 1264 aa11.47□□□□□ -0.57
NUDCD1-204ENST00000521439 CNTNAP3BQ96NU0 1288 aa11.47□□□□□ -0.57
NUDCD1-204ENST00000521439 CNTNAP3Q9BZ76 1288 aa11.47□□□□□ -0.57
NUDCD1-204ENST00000521439 CRISPLD1Q9H336 500 aa11.47□□□□□ -0.57
NUDCD1-204ENST00000521439 RUBCNLQ9H714 662 aa11.47□□□□□ -0.57
NUDCD1-204ENST00000521439 TATP17735 454 aaPredicted RBP11.46□□□□□ -0.57
NUDCD1-204ENST00000521439 MPSTP25325 297 aa11.46□□□□□ -0.57
NUDCD1-204ENST00000521439 BRD2P25440 801 aaKnown RBP11.46□□□□□ -0.57
NUDCD1-204ENST00000521439 ARHGAP4P98171 946 aa11.46□□□□□ -0.57
NUDCD1-204ENST00000521439 RNFT1Q5M7Z0 435 aa11.46□□□□□ -0.57
NUDCD1-204ENST00000521439 ATP4AP20648 1035 aa11.45□□□□□ -0.58
NUDCD1-204ENST00000521439 MARSP56192 900 aaKnown RBP11.45□□□□□ -0.58
NUDCD1-204ENST00000521439 DGKZQ13574 1117 aa11.45□□□□□ -0.58
NUDCD1-204ENST00000521439 ZSCAN1Q8NBB4 408 aa11.45□□□□□ -0.58
NUDCD1-204ENST00000521439 GPR25O00155 361 aa11.44□□□□□ -0.58
NUDCD1-204ENST00000521439 THBS1P07996 1170 aa11.44□□□□□ -0.58
NUDCD1-204ENST00000521439 ABTB2Q8N961 1025 aa11.44□□□□□ -0.58
NUDCD1-204ENST00000521439 RHPN1Q8TCX5 695 aa11.44□□□□□ -0.58
NUDCD1-204ENST00000521439 C7orf43Q8WVR3 580 aa11.44□□□□□ -0.58
NUDCD1-204ENST00000521439 KLK14Q9P0G3 267 aa11.44□□□□□ -0.58
NUDCD1-204ENST00000521439 GAS6Q14393 721 aa11.43□□□□□ -0.58
NUDCD1-204ENST00000521439 NOM1Q5C9Z4 860 aaKnown RBP11.43□□□□□ -0.58
NUDCD1-204ENST00000521439 ALKBH2Q6NS38 261 aa11.43□□□□□ -0.58
NUDCD1-204ENST00000521439 EIF1AXP47813 144 aaKnown RBP11.42□□□□□ -0.58
NUDCD1-204ENST00000521439 IFT43Q96FT9 208 aa11.42□□□□□ -0.58
NUDCD1-204ENST00000521439 PHF24Q9UPV7 400 aa11.42□□□□□ -0.58
NUDCD1-204ENST00000521439 GPC6Q9Y625 555 aaPredicted RBP11.42□□□□□ -0.58
NUDCD1-204ENST00000521439 LORP23490 312 aaPredicted RBP11.41□□□□□ -0.58
NUDCD1-204ENST00000521439 HIF1AQ16665 826 aa11.41□□□□□ -0.58
NUDCD1-204ENST00000521439 ARSJQ5FYB0 599 aaPredicted RBP11.41□□□□□ -0.58
NUDCD1-204ENST00000521439 FIGNL1Q6PIW4 674 aa11.41□□□□□ -0.58
NUDCD1-204ENST00000521439 NLRP8Q86W28 1048 aa11.41□□□□□ -0.58
NUDCD1-204ENST00000521439 CFHR5Q9BXR6 569 aa11.41□□□□□ -0.58
NUDCD1-204ENST00000521439 MBIPQ9NS73 344 aa11.41□□□□□ -0.58
NUDCD1-204ENST00000521439 DCTN4Q9UJW0 460 aa11.41□□□□□ -0.58
NUDCD1-204ENST00000521439 ZBTB39O15060 712 aa11.4□□□□□ -0.58
NUDCD1-204ENST00000521439 UBAP2LQ14157 1087 aaKnown RBP11.4□□□□□ -0.58
NUDCD1-204ENST00000521439 FAM26DQ5JW98 314 aa11.4□□□□□ -0.58
NUDCD1-204ENST00000521439 DNAJC14Q6Y2X3 702 aaPredicted RBP11.4□□□□□ -0.58
NUDCD1-204ENST00000521439 BICDL1Q6ZP65 573 aa11.4□□□□□ -0.58
NUDCD1-204ENST00000521439 ETFBKMTQ8IXQ9 262 aa11.4□□□□□ -0.58
NUDCD1-204ENST00000521439 STK17AQ9UEE5 414 aa11.4□□□□□ -0.58
NUDCD1-204ENST00000521439 A0A1W2PNR3 127 aa11.39□□□□□ -0.59
NUDCD1-204ENST00000521439 ERCC3P19447 782 aa11.39□□□□□ -0.59
NUDCD1-204ENST00000521439 MAPK1P28482 360 aa11.39□□□□□ -0.59
NUDCD1-204ENST00000521439 SRSF11Q05519 484 aaKnown RBP11.39□□□□□ -0.59
NUDCD1-204ENST00000521439 AAMPQ13685 434 aa11.39□□□□□ -0.59
NUDCD1-204ENST00000521439 FAM181BA6NEQ2 426 aa11.38□□□□□ -0.59
NUDCD1-204ENST00000521439 SLURP2P0DP57 97 aa11.38□□□□□ -0.59
NUDCD1-204ENST00000521439 SUSD3Q96L08 255 aa11.38□□□□□ -0.59
NUDCD1-204ENST00000521439 ZIC5Q96T25 663 aa11.38□□□□□ -0.59
NUDCD1-204ENST00000521439 ANKIB1Q9P2G1 1089 aa11.38□□□□□ -0.59
NUDCD1-204ENST00000521439 ATXN7L1Q9ULK2 861 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms