RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 MYL6BP14649 208 aa28.23■■■□□ 2.11
HOXA3-204ENST00000521401 PDIA6Q15084 440 aa28.23■■■□□ 2.11
HOXA3-204ENST00000521401 LRP10Q7Z4F1 713 aa28.23■■■□□ 2.11
HOXA3-204ENST00000521401 PDE6BP35913 854 aa28.22■■■□□ 2.11
HOXA3-204ENST00000521401 TTLL6Q8N841 843 aa28.22■■■□□ 2.11
HOXA3-204ENST00000521401 NIP7Q9Y221 180 aaKnown RBP eCLIP28.22■■■□□ 2.11
HOXA3-204ENST00000521401 ERVV-1B6SEH8 477 aa28.21■■■□□ 2.11
HOXA3-204ENST00000521401 APAF1O14727 1248 aa28.21■■■□□ 2.11
HOXA3-204ENST00000521401 PDZRN3Q9UPQ7 1066 aa28.21■■■□□ 2.11
HOXA3-204ENST00000521401 MAP3K15Q6ZN16 1313 aa28.2■■■□□ 2.11
HOXA3-204ENST00000521401 ARFGEF1Q9Y6D6 1849 aa28.2■■■□□ 2.11
HOXA3-204ENST00000521401 EIF2S2P20042 333 aaKnown RBP28.2■■■□□ 2.1
HOXA3-204ENST00000521401 KRT24Q2M2I5 525 aa28.2■■■□□ 2.1
HOXA3-204ENST00000521401 NBPF5PQ86XG9 351 aaPredicted RBP28.2■■■□□ 2.1
HOXA3-204ENST00000521401 ANKRD31Q8N7Z5 1873 aa28.19■■■□□ 2.1
HOXA3-204ENST00000521401 ST5P78524 1137 aa28.19■■■□□ 2.1
HOXA3-204ENST00000521401 LAS1LQ9Y4W2 734 aaKnown RBP28.19■■■□□ 2.1
HOXA3-204ENST00000521401 PROSER3Q2NL68 480 aa28.18■■■□□ 2.1
HOXA3-204ENST00000521401 C9orf131Q5VYM1 1079 aa28.17■■■□□ 2.1
HOXA3-204ENST00000521401 ZNF526Q8TF50 670 aaPredicted RBP28.17■■■□□ 2.1
HOXA3-204ENST00000521401 ZNF622Q969S3 477 aaKnown RBP eCLIP28.17■■■□□ 2.1
HOXA3-204ENST00000521401 GPBP1L1Q9HC44 474 aaPredicted RBP28.17■■■□□ 2.1
HOXA3-204ENST00000521401 DLEC1Q9Y238 1755 aa28.16■■■□□ 2.1
HOXA3-204ENST00000521401 NPHP1O15259 732 aa28.16■■■□□ 2.1
HOXA3-204ENST00000521401 C1QTNF8P60827 252 aa28.16■■■□□ 2.1
HOXA3-204ENST00000521401 KIF6Q6ZMV9 814 aa28.16■■■□□ 2.1
HOXA3-204ENST00000521401 CFAP44Q96MT7 982 aa28.16■■■□□ 2.1
HOXA3-204ENST00000521401 ANXA1P04083 346 aa28.15■■■□□ 2.1
HOXA3-204ENST00000521401 ZNF853P0CG23 659 aa28.15■■■□□ 2.1
HOXA3-204ENST00000521401 SRGNP10124 158 aa28.15■■■□□ 2.1
HOXA3-204ENST00000521401 TPTE2Q6XPS3 522 aa28.15■■■□□ 2.1
HOXA3-204ENST00000521401 ZBTB3Q9H5J0 574 aa28.15■■■□□ 2.1
HOXA3-204ENST00000521401 FAM177BA6PVY3 158 aa28.14■■■□□ 2.1
HOXA3-204ENST00000521401 KLRG2A4D1S0 409 aaPredicted RBP28.13■■■□□ 2.09
HOXA3-204ENST00000521401 STYK1Q6J9G0 422 aa28.13■■■□□ 2.09
HOXA3-204ENST00000521401 NECTIN2Q92692 538 aa28.13■■■□□ 2.09
HOXA3-204ENST00000521401 COL11A2P13942 1736 aaPredicted RBP28.12■■■□□ 2.09
HOXA3-204ENST00000521401 PRELPP51888 382 aa28.12■■■□□ 2.09
HOXA3-204ENST00000521401 RASSF7Q02833 373 aa28.12■■■□□ 2.09
HOXA3-204ENST00000521401 MBIPQ9NS73 344 aa28.12■■■□□ 2.09
HOXA3-204ENST00000521401 GIGYF2Q6Y7W6 1299 aaKnown RBP28.11■■■□□ 2.09
HOXA3-204ENST00000521401 ZNF34Q8IZ26 560 aa28.11■■■□□ 2.09
HOXA3-204ENST00000521401 MASTLQ96GX5 879 aa28.11■■■□□ 2.09
HOXA3-204ENST00000521401 UBN2Q6ZU65 1347 aa28.11■■■□□ 2.09
HOXA3-204ENST00000521401 NFKBIEO00221 500 aa28.1■■■□□ 2.09
HOXA3-204ENST00000521401 ANP32CO43423 234 aa28.1■■■□□ 2.09
HOXA3-204ENST00000521401 RNF181Q9P0P0 153 aa28.1■■■□□ 2.09
HOXA3-204ENST00000521401 GPTP24298 496 aa28.09■■■□□ 2.09
HOXA3-204ENST00000521401 CNKSR1Q969H4 720 aa28.09■■■□□ 2.09
HOXA3-204ENST00000521401 DDX21Q9NR30 783 aaKnown RBP eCLIP28.09■■■□□ 2.09
HOXA3-204ENST00000521401 IFT57Q9NWB7 429 aa28.09■■■□□ 2.09
HOXA3-204ENST00000521401 C21orf2O43822 256 aa28.08■■■□□ 2.09
HOXA3-204ENST00000521401 HOXB7P09629 217 aa28.08■■■□□ 2.09
HOXA3-204ENST00000521401 SUSD4Q5VX71 490 aa28.08■■■□□ 2.09
HOXA3-204ENST00000521401 COPS6Q7L5N1 327 aa28.08■■■□□ 2.09
HOXA3-204ENST00000521401 KIF3CO14782 793 aa28.07■■■□□ 2.08
HOXA3-204ENST00000521401 NUTM1Q86Y26 1132 aa28.07■■■□□ 2.08
HOXA3-204ENST00000521401 XAGE3Q8WTP9 111 aa28.07■■■□□ 2.08
HOXA3-204ENST00000521401 NYXQ9GZU5 481 aa28.07■■■□□ 2.08
HOXA3-204ENST00000521401 ABCC12Q96J65 1359 aa28.07■■■□□ 2.08
HOXA3-204ENST00000521401 DUSP27Q5VZP5 1158 aa28.06■■■□□ 2.08
HOXA3-204ENST00000521401 PRPF40BQ6NWY9 871 aaKnown RBP28.06■■■□□ 2.08
HOXA3-204ENST00000521401 MRS2Q9HD23 443 aa28.06■■■□□ 2.08
HOXA3-204ENST00000521401 CHPF2Q9P2E5 772 aa28.06■■■□□ 2.08
HOXA3-204ENST00000521401 ZNF219Q9P2Y4 722 aaPredicted RBP28.06■■■□□ 2.08
HOXA3-204ENST00000521401 IBTKQ9P2D0 1353 aaPredicted RBP28.06■■■□□ 2.08
HOXA3-204ENST00000521401 NPR1P16066 1061 aa28.05■■■□□ 2.08
HOXA3-204ENST00000521401 ERFEQ4G0M1 354 aa28.05■■■□□ 2.08
HOXA3-204ENST00000521401 HDGFL1Q5TGJ6 251 aa28.05■■■□□ 2.08
HOXA3-204ENST00000521401 NTSR2O95665 410 aa28.04■■■□□ 2.08
HOXA3-204ENST00000521401 LMNB1P20700 586 aa28.04■■■□□ 2.08
HOXA3-204ENST00000521401 GTF2E1P29083 439 aaPredicted RBP28.04■■■□□ 2.08
HOXA3-204ENST00000521401 GNAI1P63096 354 aa28.04■■■□□ 2.08
HOXA3-204ENST00000521401 CALD1Q05682 793 aaKnown RBP28.04■■■□□ 2.08
HOXA3-204ENST00000521401 AIMP1Q12904 312 aaKnown RBP28.04■■■□□ 2.08
HOXA3-204ENST00000521401 C7orf43Q8WVR3 580 aa28.04■■■□□ 2.08
HOXA3-204ENST00000521401 NUP98P52948 1817 aa28.03■■■□□ 2.08
HOXA3-204ENST00000521401 CRY2Q49AN0 593 aa28.02■■■□□ 2.08
HOXA3-204ENST00000521401 SENP3-EIF4A1A0A087X0R7 540 aa28.01■■■□□ 2.07
HOXA3-204ENST00000521401 CCDC27Q2M243 656 aa28.01■■■□□ 2.07
HOXA3-204ENST00000521401 PARP10Q53GL7 1025 aa28.01■■■□□ 2.07
HOXA3-204ENST00000521401 NMRK2Q9NPI5 230 aa28.01■■■□□ 2.07
HOXA3-204ENST00000521401 DBF4Q9UBU7 674 aaPredicted RBP28■■■□□ 2.07
HOXA3-204ENST00000521401 SLX4Q8IY92 1834 aa27.99■■■□□ 2.07
HOXA3-204ENST00000521401 SBF1O95248 1867 aa27.99■■■□□ 2.07
HOXA3-204ENST00000521401 RIC1Q4ADV7 1423 aa27.99■■■□□ 2.07
HOXA3-204ENST00000521401 LTBP3Q9NS15 1303 aa27.98■■■□□ 2.07
HOXA3-204ENST00000521401 ZC3H4Q9UPT8 1303 aaKnown RBP27.98■■■□□ 2.07
HOXA3-204ENST00000521401 TNRC6CQ9HCJ0 1690 aaKnown RBP27.98■■■□□ 2.07
HOXA3-204ENST00000521401 PPP1R42Q7Z4L9 355 aa27.98■■■□□ 2.07
HOXA3-204ENST00000521401 WWC1Q8IX03 1113 aa27.98■■■□□ 2.07
HOXA3-204ENST00000521401 TCIRG1Q13488 830 aa27.97■■■□□ 2.07
HOXA3-204ENST00000521401 HSP90AB3PQ58FF7 597 aa27.97■■■□□ 2.07
HOXA3-204ENST00000521401 SOGA3Q5TF21 947 aa27.97■■■□□ 2.07
HOXA3-204ENST00000521401 C8orf58Q8NAV2 365 aa27.97■■■□□ 2.07
HOXA3-204ENST00000521401 ELL2O00472 640 aaPredicted RBP27.96■■■□□ 2.07
HOXA3-204ENST00000521401 NCBP3Q53F19 620 aaKnown RBP27.96■■■□□ 2.07
HOXA3-204ENST00000521401 C3orf67Q6ZVT6 689 aa27.96■■■□□ 2.07
HOXA3-204ENST00000521401 NLRP10Q86W26 655 aa27.96■■■□□ 2.07
HOXA3-204ENST00000521401 UTP14AQ9BVJ6 771 aaKnown RBP27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms