RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 LRP5O75197 1615 aa6.65□□□□□ -1.35
VPS13B-208ENST00000521037 BCRP11274 1271 aa6.64□□□□□ -1.35
VPS13B-208ENST00000521037 RHOQP17081 205 aa6.64□□□□□ -1.35
VPS13B-208ENST00000521037 MAP3K10Q02779 954 aa6.64□□□□□ -1.35
VPS13B-208ENST00000521037 SH3D19Q5HYK7 790 aa6.64□□□□□ -1.35
VPS13B-208ENST00000521037 LRRC4BQ9NT99 713 aa6.64□□□□□ -1.35
VPS13B-208ENST00000521037 SYCP2Q9BX26 1530 aa6.64□□□□□ -1.35
VPS13B-208ENST00000521037 CDC42BPAQ5VT25 1732 aa6.64□□□□□ -1.35
VPS13B-208ENST00000521037 GPR25O00155 361 aa6.63□□□□□ -1.35
VPS13B-208ENST00000521037 MSTNO14793 375 aa6.63□□□□□ -1.35
VPS13B-208ENST00000521037 TET3O43151 1660 aa6.63□□□□□ -1.35
VPS13B-208ENST00000521037 PHLPP1O60346 1717 aa6.63□□□□□ -1.35
VPS13B-208ENST00000521037 SLIT1O75093 1534 aa6.63□□□□□ -1.35
VPS13B-208ENST00000521037 RXRBP28702 533 aa6.63□□□□□ -1.35
VPS13B-208ENST00000521037 GPC1P35052 558 aa6.63□□□□□ -1.35
VPS13B-208ENST00000521037 GGT6Q6P531 493 aa6.63□□□□□ -1.35
VPS13B-208ENST00000521037 FGD6Q6ZV73 1430 aa6.63□□□□□ -1.35
VPS13B-208ENST00000521037 SEPT12Q8IYM1 358 aa6.63□□□□□ -1.35
VPS13B-208ENST00000521037 THEMISQ8N1K5 641 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-208ENST00000521037 ENAMQ9NRM1 1142 aa6.63□□□□□ -1.35
VPS13B-208ENST00000521037 SHPRHQ149N8 1683 aa6.62□□□□□ -1.35
VPS13B-208ENST00000521037 SPATA31A6Q5VVP1 1343 aa6.62□□□□□ -1.35
VPS13B-208ENST00000521037 RAB15P59190 212 aa6.62□□□□□ -1.35
VPS13B-208ENST00000521037 ZNF772Q68DY9 489 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-208ENST00000521037 BEND7Q8N7W2 519 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-208ENST00000521037 DYRK1BQ9Y463 629 aa6.62□□□□□ -1.35
VPS13B-208ENST00000521037 AHDC1Q5TGY3 1603 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-208ENST00000521037 MAST1Q9Y2H9 1570 aa6.61□□□□□ -1.35
VPS13B-208ENST00000521037 PRDM15P57071 1507 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-208ENST00000521037 FAM135AQ9P2D6 1515 aa6.61□□□□□ -1.35
VPS13B-208ENST00000521037 GPATCH8Q9UKJ3 1502 aaKnown RBP6.61□□□□□ -1.35
VPS13B-208ENST00000521037 BCL9LQ86UU0 1499 aa6.61□□□□□ -1.35
VPS13B-208ENST00000521037 SCAF11Q99590 1463 aaKnown RBP6.61□□□□□ -1.35
VPS13B-208ENST00000521037 MBD5Q9P267 1494 aa6.61□□□□□ -1.35
VPS13B-208ENST00000521037 KIAA1107Q9UPP5 1409 aa6.61□□□□□ -1.35
VPS13B-208ENST00000521037 SPAG9O60271 1321 aaKnown RBP6.61□□□□□ -1.35
VPS13B-208ENST00000521037 AP1G2O75843 785 aa6.61□□□□□ -1.35
VPS13B-208ENST00000521037 HNRNPMP52272 730 aaKnown RBP eCLIP6.61□□□□□ -1.35
VPS13B-208ENST00000521037 DZIP3Q86Y13 1208 aaKnown RBP6.61□□□□□ -1.35
VPS13B-208ENST00000521037 TRIM34Q9BYJ4 488 aa6.61□□□□□ -1.35
VPS13B-208ENST00000521037 GRIP2Q9C0E4 1043 aa6.61□□□□□ -1.35
VPS13B-208ENST00000521037 CYLDQ9NQC7 956 aa6.61□□□□□ -1.35
VPS13B-208ENST00000521037 UBR1Q8IWV7 1749 aa6.61□□□□□ -1.35
VPS13B-208ENST00000521037 TIAM1Q13009 1591 aa6.61□□□□□ -1.35
VPS13B-208ENST00000521037 NWD1Q149M9 1564 aa6.61□□□□□ -1.35
VPS13B-208ENST00000521037 A0A1W2PRU2 124 aa6.6□□□□□ -1.35
VPS13B-208ENST00000521037 PHF20L1A8MW92 1017 aa6.6□□□□□ -1.35
VPS13B-208ENST00000521037 THBS1P07996 1170 aa6.6□□□□□ -1.35
VPS13B-208ENST00000521037 FAM117AQ9C073 453 aa6.6□□□□□ -1.35
VPS13B-208ENST00000521037 CAMSAP2Q08AD1 1489 aa6.6□□□□□ -1.35
VPS13B-208ENST00000521037 LRRC9Q6ZRR7 1453 aa6.6□□□□□ -1.35
VPS13B-208ENST00000521037 DHX29Q7Z478 1369 aaKnown RBP6.59□□□□□ -1.35
VPS13B-208ENST00000521037 AFF2P51816 1311 aa6.59□□□□□ -1.35
VPS13B-208ENST00000521037 ATP5J2-PTCD1G3V325 749 aa6.59□□□□□ -1.35
VPS13B-208ENST00000521037 GIGYF1O75420 1035 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-208ENST00000521037 USP17L8P0C7I0 530 aa6.59□□□□□ -1.35
VPS13B-208ENST00000521037 GTPBP3Q969Y2 492 aaKnown RBP6.59□□□□□ -1.35
VPS13B-208ENST00000521037 SLAIN2Q9P270 581 aa6.59□□□□□ -1.35
VPS13B-208ENST00000521037 UTRNP46939 3433 aa6.59□□□□□ -1.35
VPS13B-208ENST00000521037 ARHGAP35Q9NRY4 1499 aa6.59□□□□□ -1.36
VPS13B-208ENST00000521037 ADGBQ8N7X0 1667 aa6.58□□□□□ -1.36
VPS13B-208ENST00000521037 OIP5O43482 229 aa6.58□□□□□ -1.36
VPS13B-208ENST00000521037 ERVK-9P63128 1117 aa6.58□□□□□ -1.36
VPS13B-208ENST00000521037 POU4F2Q12837 409 aa6.58□□□□□ -1.36
VPS13B-208ENST00000521037 WDR44Q5JSH3 913 aa6.58□□□□□ -1.36
VPS13B-208ENST00000521037 ERVK-7P63135 1459 aa6.58□□□□□ -1.36
VPS13B-208ENST00000521037 NHSL1Q5SYE7 1610 aa6.58□□□□□ -1.36
VPS13B-208ENST00000521037 KRBA1A5PL33 1030 aa6.57□□□□□ -1.36
VPS13B-208ENST00000521037 SPATA31C2B4DYI2 1134 aa6.57□□□□□ -1.36
VPS13B-208ENST00000521037 KCNA6P17658 529 aa6.57□□□□□ -1.36
VPS13B-208ENST00000521037 RANGAP1P46060 587 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-208ENST00000521037 SNRPNP63162 240 aaKnown RBP6.57□□□□□ -1.36
VPS13B-208ENST00000521037 NBPF10Q6P3W6 841 aaKnown RBP6.57□□□□□ -1.36
VPS13B-208ENST00000521037 FOXR1Q6PIV2 292 aa6.57□□□□□ -1.36
VPS13B-208ENST00000521037 RIPOR1Q6ZS17 1223 aa6.57□□□□□ -1.36
VPS13B-208ENST00000521037 C1orf229Q6ZS94 237 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-208ENST00000521037 FAM9AQ8IZU1 332 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-208ENST00000521037 NBPF15Q8N660 670 aa6.57□□□□□ -1.36
VPS13B-208ENST00000521037 KRTAP4-8Q9BYQ9 185 aa6.57□□□□□ -1.36
VPS13B-208ENST00000521037 MROH1Q8NDA8 1641 aa6.57□□□□□ -1.36
VPS13B-208ENST00000521037 H7C1W4 665 aa6.56□□□□□ -1.36
VPS13B-208ENST00000521037 HOXB4P17483 251 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-208ENST00000521037 UBAP2LQ14157 1087 aaKnown RBP6.56□□□□□ -1.36
VPS13B-208ENST00000521037 NEDD1Q8NHV4 660 aa6.56□□□□□ -1.36
VPS13B-208ENST00000521037 ABCC3O15438 1527 aa6.55□□□□□ -1.36
VPS13B-208ENST00000521037 KDM5AP29375 1690 aaKnown RBP6.55□□□□□ -1.36
VPS13B-208ENST00000521037 ZNF644Q9H582 1327 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-208ENST00000521037 NKTRP30414 1462 aaKnown RBP6.55□□□□□ -1.36
VPS13B-208ENST00000521037 SHISA8B8ZZ34 492 aa6.55□□□□□ -1.36
VPS13B-208ENST00000521037 MEN1O00255 615 aa6.55□□□□□ -1.36
VPS13B-208ENST00000521037 TRAK2O60296 914 aa6.55□□□□□ -1.36
VPS13B-208ENST00000521037 RFC5P40937 340 aa6.55□□□□□ -1.36
VPS13B-208ENST00000521037 RBM6P78332 1123 aaKnown RBP6.55□□□□□ -1.36
VPS13B-208ENST00000521037 CLN3Q13286 438 aa6.55□□□□□ -1.36
VPS13B-208ENST00000521037 KDM4CQ9H3R0 1056 aa6.55□□□□□ -1.36
VPS13B-208ENST00000521037 RTEL1-TNFRSF6BF6WH68 1400 aa6.55□□□□□ -1.36
VPS13B-208ENST00000521037 ATAD2Q6PL18 1390 aa6.55□□□□□ -1.36
VPS13B-208ENST00000521037 SETD5Q9C0A6 1442 aa6.54□□□□□ -1.36
VPS13B-208ENST00000521037 MX2P20592 715 aa6.54□□□□□ -1.36
VPS13B-208ENST00000521037 COL8A1P27658 744 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms