RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 WDR43Q15061 677 aaKnown RBP eCLIP14.14□□□□□ -0.15
PVT1-209ENST00000520913 NBPF10Q6P3W6 841 aaKnown RBP14.14□□□□□ -0.15
PVT1-209ENST00000520913 NBPF15Q8N660 670 aa14.14□□□□□ -0.15
PVT1-209ENST00000520913 TTLL6Q8N841 843 aa14.14□□□□□ -0.15
PVT1-209ENST00000520913 BRIP1Q9BX63 1249 aa14.14□□□□□ -0.15
PVT1-209ENST00000520913 RIPK4P57078 832 aa14.13□□□□□ -0.15
PVT1-209ENST00000520913 EIF4A1P60842 406 aaKnown RBP14.13□□□□□ -0.15
PVT1-209ENST00000520913 C9orf131Q5VYM1 1079 aa14.13□□□□□ -0.15
PVT1-209ENST00000520913 TSPYL4Q9UJ04 414 aa14.13□□□□□ -0.15
PVT1-209ENST00000520913 LAMB2P55268 1798 aa14.13□□□□□ -0.15
PVT1-209ENST00000520913 TMPOP42166 694 aaKnown RBP14.12□□□□□ -0.15
PVT1-209ENST00000520913 PRKRIP1Q9H875 184 aaPredicted RBP14.12□□□□□ -0.15
PVT1-209ENST00000520913 RNF181Q9P0P0 153 aa14.12□□□□□ -0.15
PVT1-209ENST00000520913 ERBB4Q15303 1308 aa14.12□□□□□ -0.15
PVT1-209ENST00000520913 ZC3H4Q9UPT8 1303 aaKnown RBP14.12□□□□□ -0.15
PVT1-209ENST00000520913 RASSF7Q02833 373 aa14.11□□□□□ -0.15
PVT1-209ENST00000520913 NBPF5PQ86XG9 351 aaPredicted RBP14.11□□□□□ -0.15
PVT1-209ENST00000520913 WDR90Q96KV7 1748 aa14.11□□□□□ -0.15
PVT1-209ENST00000520913 BABAM1Q9NWV8 329 aa14.11□□□□□ -0.15
PVT1-209ENST00000520913 KIF3CO14782 793 aa14.1□□□□□ -0.15
PVT1-209ENST00000520913 CCDC146Q8IYE0 955 aa14.1□□□□□ -0.15
PVT1-209ENST00000520913 CCDC24Q8N4L8 307 aa14.1□□□□□ -0.15
PVT1-209ENST00000520913 ZNF622Q969S3 477 aaKnown RBP eCLIP14.1□□□□□ -0.152e-7■■■■□ 24.3
PVT1-209ENST00000520913 RUNDC1Q96C34 613 aa14.1□□□□□ -0.15
PVT1-209ENST00000520913 NIP7Q9Y221 180 aaKnown RBP eCLIP14.1□□□□□ -0.15
PVT1-209ENST00000520913 IBTKQ9P2D0 1353 aaPredicted RBP14.09□□□□□ -0.15
PVT1-209ENST00000520913 RIC1Q4ADV7 1423 aa14.09□□□□□ -0.15
PVT1-209ENST00000520913 KIF6Q6ZMV9 814 aa14.09□□□□□ -0.15
PVT1-209ENST00000520913 MAP3K15Q6ZN16 1313 aa14.09□□□□□ -0.15
PVT1-209ENST00000520913 KDM2BQ8NHM5 1336 aa14.09□□□□□ -0.15
PVT1-209ENST00000520913 ERVV-1B6SEH8 477 aa14.08□□□□□ -0.16
PVT1-209ENST00000520913 MYL6BP14649 208 aa14.08□□□□□ -0.16
PVT1-209ENST00000520913 LMNB1P20700 586 aa14.08□□□□□ -0.16
PVT1-209ENST00000520913 STYK1Q6J9G0 422 aa14.08□□□□□ -0.16
PVT1-209ENST00000520913 CNKSR1Q969H4 720 aa14.08□□□□□ -0.16
PVT1-209ENST00000520913 RRP7AQ9Y3A4 280 aaKnown RBP14.08□□□□□ -0.16
PVT1-209ENST00000520913 NFKBIEO00221 500 aa14.07□□□□□ -0.16
PVT1-209ENST00000520913 SRGNP10124 158 aa14.07□□□□□ -0.16
PVT1-209ENST00000520913 ZEB1P37275 1124 aaPredicted RBP14.07□□□□□ -0.16
PVT1-209ENST00000520913 HLFQ16534 295 aa14.07□□□□□ -0.16
PVT1-209ENST00000520913 TPTE2Q6XPS3 522 aa14.07□□□□□ -0.16
PVT1-209ENST00000520913 NGEFQ8N5V2 710 aa14.07□□□□□ -0.16
PVT1-209ENST00000520913 MASTLQ96GX5 879 aa14.07□□□□□ -0.16
PVT1-209ENST00000520913 NEUROD2Q15784 382 aa14.06□□□□□ -0.16
PVT1-209ENST00000520913 SOGA3Q5TF21 947 aa14.06□□□□□ -0.16
PVT1-209ENST00000520913 PRPF40BQ6NWY9 871 aaKnown RBP14.06□□□□□ -0.16
PVT1-209ENST00000520913 NYXQ9GZU5 481 aa14.06□□□□□ -0.16
PVT1-209ENST00000520913 NMRK2Q9NPI5 230 aa14.06□□□□□ -0.16
PVT1-209ENST00000520913 LTBP3Q9NS15 1303 aa14.06□□□□□ -0.16
PVT1-209ENST00000520913 DDX60Q8IY21 1712 aaKnown RBP14.06□□□□□ -0.16
PVT1-209ENST00000520913 ABCC12Q96J65 1359 aa14.06□□□□□ -0.16
PVT1-209ENST00000520913 C21orf2O43822 256 aa14.05□□□□□ -0.16
PVT1-209ENST00000520913 NPR1P16066 1061 aa14.05□□□□□ -0.16
PVT1-209ENST00000520913 TTLL7Q6ZT98 887 aa14.05□□□□□ -0.16
PVT1-209ENST00000520913 ZBTB3Q9H5J0 574 aa14.05□□□□□ -0.16
PVT1-209ENST00000520913 ADAMTS8Q9UP79 889 aa14.05□□□□□ -0.16
PVT1-209ENST00000520913 SCN4AP35499 1836 aa14.04□□□□□ -0.16
PVT1-209ENST00000520913 FAM177BA6PVY3 158 aa14.04□□□□□ -0.16
PVT1-209ENST00000520913 TOMM70O94826 608 aa14.04□□□□□ -0.16
PVT1-209ENST00000520913 HSPA6P17066 643 aa14.04□□□□□ -0.16
PVT1-209ENST00000520913 GTF2E1P29083 439 aaPredicted RBP14.04□□□□□ -0.16
PVT1-209ENST00000520913 C16orf71Q8IYS4 520 aaPredicted RBP14.04□□□□□ -0.16
PVT1-209ENST00000520913 ZNF219Q9P2Y4 722 aaPredicted RBP14.04□□□□□ -0.16
PVT1-209ENST00000520913 TRIM35Q9UPQ4 493 aa14.04□□□□□ -0.16
PVT1-209ENST00000520913 KLRG2A4D1S0 409 aaPredicted RBP14.03□□□□□ -0.16
PVT1-209ENST00000520913 EIF2S2P20042 333 aaKnown RBP14.03□□□□□ -0.16
PVT1-209ENST00000520913 PRELPP51888 382 aa14.03□□□□□ -0.16
PVT1-209ENST00000520913 GIGYF2Q6Y7W6 1299 aaKnown RBP14.03□□□□□ -0.16
PVT1-209ENST00000520913 TAOK3Q9H2K8 898 aa14.03□□□□□ -0.16
PVT1-209ENST00000520913 UBN2Q6ZU65 1347 aa14.03□□□□□ -0.16
PVT1-209ENST00000520913 CHL1O00533 1208 aa14.02□□□□□ -0.17
PVT1-209ENST00000520913 CCDC93Q567U6 631 aa14.02□□□□□ -0.17
PVT1-209ENST00000520913 LRP10Q7Z4F1 713 aa14.02□□□□□ -0.17
PVT1-209ENST00000520913 LAS1LQ9Y4W2 734 aaKnown RBP14.02□□□□□ -0.17
PVT1-209ENST00000520913 GLTPD2A6NH11 291 aa14.01□□□□□ -0.17
PVT1-209ENST00000520913 HOXB7P09629 217 aa14.01□□□□□ -0.17
PVT1-209ENST00000520913 GPTP24298 496 aa14.01□□□□□ -0.17
PVT1-209ENST00000520913 PDIA6Q15084 440 aa14.01□□□□□ -0.17
PVT1-209ENST00000520913 RBM46Q8TBY0 533 aaKnown RBP14.01□□□□□ -0.17
PVT1-209ENST00000520913 NTSR2O95665 410 aa14□□□□□ -0.17
PVT1-209ENST00000520913 ANXA1P04083 346 aa14□□□□□ -0.17
PVT1-209ENST00000520913 PROSER3Q2NL68 480 aa14□□□□□ -0.17
PVT1-209ENST00000520913 CRY2Q49AN0 593 aa14□□□□□ -0.17
PVT1-209ENST00000520913 PARP10Q53GL7 1025 aa14□□□□□ -0.17
PVT1-209ENST00000520913 PPP1R42Q7Z4L9 355 aa14□□□□□ -0.17
PVT1-209ENST00000520913 NUTM1Q86Y26 1132 aa14□□□□□ -0.17
PVT1-209ENST00000520913 ZNF34Q8IZ26 560 aa14□□□□□ -0.17
PVT1-209ENST00000520913 LRRC37AA6NMS7 1700 aa14□□□□□ -0.17
PVT1-209ENST00000520913 TAF1P21675 1872 aa13.99□□□□□ -0.17
PVT1-209ENST00000520913 SNED1Q8TER0 1413 aa13.99□□□□□ -0.17
PVT1-209ENST00000520913 RNF123Q5XPI4 1314 aa13.99□□□□□ -0.17
PVT1-209ENST00000520913 ALDH1B1P30837 517 aa13.99□□□□□ -0.17
PVT1-209ENST00000520913 CALD1Q05682 793 aaKnown RBP13.99□□□□□ -0.17
PVT1-209ENST00000520913 KRT24Q2M2I5 525 aa13.99□□□□□ -0.17
PVT1-209ENST00000520913 ERFEQ4G0M1 354 aa13.99□□□□□ -0.17
PVT1-209ENST00000520913 HSP90AB3PQ58FF7 597 aa13.99□□□□□ -0.17
PVT1-209ENST00000520913 HDGFL1Q5TGJ6 251 aa13.99□□□□□ -0.17
PVT1-209ENST00000520913 NECTIN2Q92692 538 aa13.99□□□□□ -0.17
PVT1-209ENST00000520913 CFAP44Q96MT7 982 aa13.99□□□□□ -0.17
PVT1-209ENST00000520913 RRAGCQ9HB90 399 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms