RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	OSBPL2	Q9H1P3	480 aa		5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	POTEB3	A0JP26	581 aa		5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	PPEF1	O14829	653 aa	Predicted RBP	5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	ST18	O60284	1047 aa		5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	MARCH6	O60337	910 aa		5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	STK10	O94804	968 aa	Known RBP	5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	IRS1	P35568	1242 aa		5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	SMTN	P53814	917 aa		5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	RBL2	Q08999	1139 aa		5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	POTEB	Q6S5H4	581 aa		5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	NUDT16	Q96DE0	195 aa	Known RBP	5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	SLC4A9	Q96Q91	983 aa		5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	SRA1	Q9HD15	236 aa	Known RBP	5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	CHMP3	Q9Y3E7	222 aa		5.23	□□□□□ -1.57
SREK1-208	ENST00000520580	EIF4B	P23588	611 aa	Known RBP	5.22	□□□□□ -1.57
SREK1-208	ENST00000520580	ALDH16A1	Q8IZ83	802 aa		5.22	□□□□□ -1.57
SREK1-208	ENST00000520580	MICAL1	Q8TDZ2	1067 aa		5.22	□□□□□ -1.57
SREK1-208	ENST00000520580	ARMC5	Q96C12	935 aa		5.22	□□□□□ -1.57
SREK1-208	ENST00000520580	SPG7	Q9UQ90	795 aa		5.22	□□□□□ -1.57
SREK1-208	ENST00000520580		V9GY48	417 aa	Predicted RBP	5.22	□□□□□ -1.57
SREK1-208	ENST00000520580		F6X3S4	739 aa		5.22	□□□□□ -1.57
SREK1-208	ENST00000520580	USP5	P45974	858 aa		5.22	□□□□□ -1.57
SREK1-208	ENST00000520580	DHX37	Q8IY37	1157 aa	Known RBP	5.22	□□□□□ -1.57
SREK1-208	ENST00000520580	HS3ST6	Q96QI5	342 aa		5.22	□□□□□ -1.57
SREK1-208	ENST00000520580	GGNBP2	Q9H3C7	697 aa		5.22	□□□□□ -1.57
SREK1-208	ENST00000520580	NEUROD4	Q9HD90	331 aa		5.22	□□□□□ -1.57
SREK1-208	ENST00000520580	FGR	P09769	529 aa		5.21	□□□□□ -1.57
SREK1-208	ENST00000520580	TLR1	Q15399	786 aa		5.21	□□□□□ -1.57
SREK1-208	ENST00000520580	USPL1	Q5W0Q7	1092 aa		5.21	□□□□□ -1.57
SREK1-208	ENST00000520580	NOL8	Q76FK4	1167 aa	Known RBP	5.21	□□□□□ -1.57
SREK1-208	ENST00000520580	VPS37D	Q86XT2	251 aa		5.21	□□□□□ -1.57
SREK1-208	ENST00000520580	MYO19	Q96H55	970 aa		5.21	□□□□□ -1.57
SREK1-208	ENST00000520580	OSBPL7	Q9BZF2	842 aa		5.21	□□□□□ -1.57
SREK1-208	ENST00000520580	COPRS	Q9NQ92	184 aa		5.21	□□□□□ -1.57
SREK1-208	ENST00000520580	TLL2	Q9Y6L7	1015 aa		5.21	□□□□□ -1.57
SREK1-208	ENST00000520580	ADD1	P35611	737 aa	Known RBP	5.21	□□□□□ -1.58
SREK1-208	ENST00000520580	PAK2	Q13177	524 aa		5.21	□□□□□ -1.58
SREK1-208	ENST00000520580	EPS8L3	Q8TE67	593 aa	Known RBP	5.21	□□□□□ -1.58
SREK1-208	ENST00000520580	FBF1	Q8TES7	1133 aa		5.21	□□□□□ -1.58
SREK1-208	ENST00000520580	IFT43	Q96FT9	208 aa		5.21	□□□□□ -1.58
SREK1-208	ENST00000520580	ARID4B	Q4LE39	1312 aa	Predicted RBP	5.21	□□□□□ -1.58
SREK1-208	ENST00000520580	SERTM1	A2A2V5	107 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	LILRA1	O75019	489 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	GNRH1	P01148	92 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	IL2RA	P01589	272 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	ATF4	P18848	351 aa	Predicted RBP	5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	SKOR1	P84550	965 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	TRIM32	Q13049	653 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	MTFR1	Q15390	333 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	CYP2U1	Q7Z449	544 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	TREML1	Q86YW5	311 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	TTC16	Q8NEE8	873 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	CNKSR1	Q969H4	720 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	CABP1	Q9NZU7	370 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	EML1	O00423	815 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	VARS	P26640	1264 aa	Known RBP	5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	C11orf91	Q3C1V1	193 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	ESCO1	Q5FWF5	840 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	ZNF746	Q6NUN9	644 aa	Predicted RBP	5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	STAG2	Q8N3U4	1231 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	ZDHHC1	Q8WTX9	485 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	L3MBTL2	Q969R5	705 aa		5.2	□□□□□ -1.58
SREK1-208	ENST00000520580	hCG_2014768	A0A024R1R8	64 aa		5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	NOS2	P35228	1153 aa		5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	GRM5	P41594	1212 aa		5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	THSD4	Q6ZMP0	1018 aa		5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	EHBP1	Q8NDI1	1231 aa		5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	FOXD3	Q9UJU5	478 aa	Predicted RBP	5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	USP20	Q9Y2K6	914 aa		5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	MAP4K5	Q9Y4K4	846 aa		5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	PTPRO	Q16827	1216 aa		5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	KCTD12	Q96CX2	325 aa	Known RBP	5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	FAM163A	Q96GL9	167 aa	Predicted RBP	5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	PHACTR1	Q9C0D0	580 aa		5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	C12orf49	Q9H741	205 aa		5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	MRVI1	Q9Y6F6	885 aa		5.19	□□□□□ -1.58
SREK1-208	ENST00000520580	CCDC85C	A6NKD9	419 aa		5.18	□□□□□ -1.58
SREK1-208	ENST00000520580		K7ELQ4	463 aa	Predicted RBP	5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	CPNE3	O75131	537 aa	Known RBP	5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	PCSK2	P16519	638 aa		5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	MYT1	Q01538	1121 aa		5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	TAF1C	Q15572	869 aa	Predicted RBP	5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	TJAP1	Q5JTD0	557 aa		5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	GPRASP2	Q96D09	838 aa		5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	KLHL42	Q9P2K6	505 aa		5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	GJA8	P48165	433 aa		5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	PTPN5	P54829	565 aa		5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	DHX9	Q08211	1270 aa	Known RBP	5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	RTN1	Q16799	776 aa		5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	PLA2G2C	Q5R387	149 aa		5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	CCDC116	Q8IYX3	515 aa		5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	ZNF408	Q9H9D4	720 aa		5.18	□□□□□ -1.58
SREK1-208	ENST00000520580	USP17L7	P0C7H9	530 aa		5.17	□□□□□ -1.58
SREK1-208	ENST00000520580	IGBP1	P78318	339 aa		5.17	□□□□□ -1.58
SREK1-208	ENST00000520580	PTPN12	Q05209	780 aa	Known RBP	5.17	□□□□□ -1.58
SREK1-208	ENST00000520580	SOGA3	Q5TF21	947 aa		5.17	□□□□□ -1.58
SREK1-208	ENST00000520580	NXPE4	Q6UWF7	544 aa		5.17	□□□□□ -1.58
SREK1-208	ENST00000520580	CCDC74A	Q96AQ1	378 aa		5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms